We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBK1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
34.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
31.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
28.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
27.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
19.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
19.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
19.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
18.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
17.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
15.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
13.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
13.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
12.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
12.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
11.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
11.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
10.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
10.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
8.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
8.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
8.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
7.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
7.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
7.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
6.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
5.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
5.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
5.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
4.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
4.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
3.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
3.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
2.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBK1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
42.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
36.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
26.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
22.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
20.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
17.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
17.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
17.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
16.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
16.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
16.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
15.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
15.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
15.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
15.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
15.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
15.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
15.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
14.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
14.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
14.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
14.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
14.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
14.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
14.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
14.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
14.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
14.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
14.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
14.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
13.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
13.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
13.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
13.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
13.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
13.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
13.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
13.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
13.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
13.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
13.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
13.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
12.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
12.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
12.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
12.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
12.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
12.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
12.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
12.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
12.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
12.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
12.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
12.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
12.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
12.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
11.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
11.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
11.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
11.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
11.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
11.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
11.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
11.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
11.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
11.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
11.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
11.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
11.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
11.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
11.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
11.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
11.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
10.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
10.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
10.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
10.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
10.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
10.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
10.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
10.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
10.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
10.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
10.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
10.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
10.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
10.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
10.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
10.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
10.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
10.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
10.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
10.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
10.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
10.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
10.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
10.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
10.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
10.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
10.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
10.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
10.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
10.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
9.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
9.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
9.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
9.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
9.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
9.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
9.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
9.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
9.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
9.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
9.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
9.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
9.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
9.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
9.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
9.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
9.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
9.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
9.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
9.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
9.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
9.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
9.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
9.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
9.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
9.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
9.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
9.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
9.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
9.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
9.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
9.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
9.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
9.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
9.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
9.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
9.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
9.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
9.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
9.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
8.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
8.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
8.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
8.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
8.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
8.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
8.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
8.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
8.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
8.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
8.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
8.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
8.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
8.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
8.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
8.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
8.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
8.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
8.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
8.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
8.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
8.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
8.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
8.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
8.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
8.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
8.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
8.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
8.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
8.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
8.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
8.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
8.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
8.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
8.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
8.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
8.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
8.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
8.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
8.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
8.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
7.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
7.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
7.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
7.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
7.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
7.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
7.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
7.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
7.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
7.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
7.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
7.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
7.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
7.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
7.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
7.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
7.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
7.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
7.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
7.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
7.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
7.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
7.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
7.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
7.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
7.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
7.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
7.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
7.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
7.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
7.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
7.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
7.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
7.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
7.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
7.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
7.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
7.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
7.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
7.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
7.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
7.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
6.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
6.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
6.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
6.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
6.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
6.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
6.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
6.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
6.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
6.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
6.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
6.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
6.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
6.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
6.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
6.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
6.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
6.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
6.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
6.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
6.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
6.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
6.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
6.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
6.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
6.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
6.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
6.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
6.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
6.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
6.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
6.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
6.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
6.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
6.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
6.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
6.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
6.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
6.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
5.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
5.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
5.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
5.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
5.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
5.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
5.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
5.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
5.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
5.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
5.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
5.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
5.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
5.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
5.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
5.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
5.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
5.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
5.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
5.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
5.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
5.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
5.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
5.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
5.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
5.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
5.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
5.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
5.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
5.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
5.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
5.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
5.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
5.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
5.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
5.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
4.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
4.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
4.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
4.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
4.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
4.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
4.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
4.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
4.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
4.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
4.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
4.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
4.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
4.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
4.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
4.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
4.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
4.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
4.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
4.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
4.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
4.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
4.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
4.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
4.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
4.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
4.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
4.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
4.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
4.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
3.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
3.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
3.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
3.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
3.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
3.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
3.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
3.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
3.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
3.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
3.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
3.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
3.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
3.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
3.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
3.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
3.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
3.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
3.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
3.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
3.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
3.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
2.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
2.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
2.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
2.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
2.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
2.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
2.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
2.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
2.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
2.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
2.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
2.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
2.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
2.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
2.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
2.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
2.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
2.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
2.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
2.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
2.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
2.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
2.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
2.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
2.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
1.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
1.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
1.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
1.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
1.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
1.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
1.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
1.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
1.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
1.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
1.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
1.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
1.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
1.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
1.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
0.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
0.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
0.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
0.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
0.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
0.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
0.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
0.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
0.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
0.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
0.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
0.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
0.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
0.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
0.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
0.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
0.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
0.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
0.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBK1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
29.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
26.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
25.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
24.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
23.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
23.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
23.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
22.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
21.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
21.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
21.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
21.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
21.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
21.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
20.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
20.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
20.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
20.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
20.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
19.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
19.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
19.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
18.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
18.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
18.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
18.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
18.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
18.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
17.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
17.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
17.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
17.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
17.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
17.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
17.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
17.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
17.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
16.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
16.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
16.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
15.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
15.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
15.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
15.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
14.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
14.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
13.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
13.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
13.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
13.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
13.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
13.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
12.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
12.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
12.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
12.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
11.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
11.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
11.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
11.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
11.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
10.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
10.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
10.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
9.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
9.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
8.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
8.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
7.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
5.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
5.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
5.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBK1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
54.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
52.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
36.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
34.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
31.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
26.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
26.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
24.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
24.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
22.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
20.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
20.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
18.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
18.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
17.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
16.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
16.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
16.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
14.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
14.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
13.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
13.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
13.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
13.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
12.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
12.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
12.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
12.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
12.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
12.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
12.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
11.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
11.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
11.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
11.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
11.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
11.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
11.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
11.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
11.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
10.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
10.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
10.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
10.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
10.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
10.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
10.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
10.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
10.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
10.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
10.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
9.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
9.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
9.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
9.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
9.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
9.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
9.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
9.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
9.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
9.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
9.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
9.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
8.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
8.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
8.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
8.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
8.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
8.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
8.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
8.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
8.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
8.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
8.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
8.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
8.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
8.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
8.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
8.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
7.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
7.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
7.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
7.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
7.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
7.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
7.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
7.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
7.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
7.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
7.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
7.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
7.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
7.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
7.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
7.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
7.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
7.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
7.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
7.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
7.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
6.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
6.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
6.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
6.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
6.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
6.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
6.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
6.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
6.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
6.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
6.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
6.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
6.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
6.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
5.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
5.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
5.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
5.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
5.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
5.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
5.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
5.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
5.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
5.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
5.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
5.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
5.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
5.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
5.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
5.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
4.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
4.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
4.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
4.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
4.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
4.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
4.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
4.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
4.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
4.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
4.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
4.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
4.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
4.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
4.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
4.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
4.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
4.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
4.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
4.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
4.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
3.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
3.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
3.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
3.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
3.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
3.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
3.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
3.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
3.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
3.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
3.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
3.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
2.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
2.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
2.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
2.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
2.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
2.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
2.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
2.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
2.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
2.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
1.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
1.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
1.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
1.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
1.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
1.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
1.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
1.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
1.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
0.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
0.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
0.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
0.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
0.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
0.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
0.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
0.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
0.6
CPT0088550004
Tumor
0.5
CPT0088480003
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0078660003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0001180009
Tumor
0.4
CPT0084560003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0010160003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0088760003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0078800003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0076350001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0012550003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0075570001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0017410003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0012770003
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0069190001
Normal
-0.1
CPT0065750003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0063330001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0088970003
Tumor
-0.2
CPT0014350001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0079510001
Normal
-0.3
CPT0019160001
Normal
-0.3
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
