HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:35.2 nTPM
HPA Brain:27.9 nTPM
GTEx:35.2 nTPM
FANTOM5:97.8 Scaled Tags Per Million
Pig:61.4 nTPM
Mouse:158.9 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 27.9
Sample id Sample description nTPM
Hippocampus
nTPM: 27.9
1855 Male, age 76, left hemisphere 33.5
1898 Male, age 80, left hemisphere 33.3
1911 Female, age 85, right hemisphere 29.0
2621 Female, age 67, right hemisphere 26.1
2529 Female, age 94, left hemisphere 23.8
2148 Female, age 91, left hemisphere 21.9
Dentate gyrus
nTPM: 26.4
2010 Male, age 76, both hemispheres 29.6
2530 Female, age 94, left hemisphere 29.0
2246 Female, age 85, both hemispheres 27.4
1927 Female, age 91, both hemispheres 26.3
2528 Male, age 74, both hemispheres 24.6
2531 Female, age 67, both hemispheres 21.4
Entorhinal gyrus
nTPM: 22.5
1787 Male, age 76, left hemisphere 24.9
2117 Female, age 91, right hemisphere 24.8
1938 Female, age 85, left hemisphere 24.7
2764 Male, age 80, right hemisphere 22.9
2613 Female, age 94, left hemisphere 19.1
2686 Male, age 75, right hemisphere 18.4
Hippocampus, CA1
nTPM: 27.8
2749 Male, age 80, left hemisphere 34.7
1873 Female, age 85, both hemispheres 31.4
2045 Male, age 76, both hemispheres 28.5
2527 Male, age 74, both hemispheres 24.0
2082 Female, age 91, right hemisphere 20.3
Hippocampus, CA2
nTPM: 26.2
1892 Male, age 76, both hemispheres 31.4
1963 Male, age 80, left hemisphere 28.9
1940 Female, age 85, left hemisphere 28.1
2249 Male, age 74, both hemispheres 24.1
2113 Female, age 91, right hemisphere 22.4
2437 Female, age 94, left hemisphere 22.2
Hippocampus, CA3
nTPM: 27.1
1891 Female, age 85, both hemispheres 30.3
1867 Male, age 76, both hemispheres 28.9
2620 Female, age 94, left hemisphere 28.6
2137 Male, age 80, left hemisphere 26.6
2436 Male, age 74, both hemispheres 25.0
2861 Female, age 67, both hemispheres 23.2
Parahippocampal cortex
nTPM: 24.2
1850 Male, age 80, both hemispheres 28.7
2693 Female, age 94, both hemispheres 27.1
1933 Female, age 85, both hemispheres 26.9
2532 Female, age 72, left hemisphere 25.9
2018 Male, age 76, both hemispheres 24.1
2250 Female, age 67, right hemisphere 24.1
2245 Female, age 91, both hemispheres 23.3
1990 Female, age 91, right hemisphere 22.3
2692 Male, age 74, both hemispheres 20.9
2622 Female, age 67, right hemisphere 18.0
Perirhinal gyrus
nTPM: 27.8
1841 Female, age 85, right hemisphere 32.4
1794 Male, age 80, right hemisphere 29.7
2521 Female, age 94, right hemisphere 27.2
1847 Female, age 91, left hemisphere 25.1
2848 Male, age 76, right hemisphere 24.5
Subiculum
nTPM: 25.1
2042 Male, age 76, both hemispheres 28.9
1901 Male, age 80, both hemispheres 27.3
1977 Female, age 85, both hemispheres 26.2
2729 Female, age 91, right hemisphere 23.5
2438 Female, age 94, left hemisphere 22.8
2619 Male, age 74, both hemispheres 21.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 35.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.2
Samples: 197

Max nTPM: 67.7
Min nTPM: 18.1
Std nTPM: 7.0
Median nTPM: 34.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 67.7
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 58.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 50.3
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 49.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 48.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 48.2
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 47.9
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 47.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 47.3
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 47.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 47.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 97.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.8
FF:10169-103B7 60 years, female 114.2
FF:10153-102I9 76 years, female 81.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 61.4
Pig sample Sample description nTPM
Subiculum
nTPM: 50.7
Samples: 4

Max nTPM: 66.5
Min nTPM: 41.6
Sample A Female 66.5
Sample B Female 46.1
Sample C Male 41.6
Sample D Male 48.5
Dorsal hippocampus
nTPM: 61.4
Samples: 4

Max nTPM: 80.6
Min nTPM: 46.7
Sample A Female 80.6
Sample B Female 57.5
Sample C Male 60.7
Sample D Male 46.7
Entorhinal cortex
nTPM: 46.9
Samples: 4

Max nTPM: 57.1
Min nTPM: 31.2
Sample A Female 47.8
Sample B Female 57.1
Sample C Male 51.5
Sample D Male 31.2
Ventral hippocampus
nTPM: 51.6
Samples: 4

Max nTPM: 54.2
Min nTPM: 46.2
Sample A Female 53.6
Sample B Female 46.2
Sample C Male 52.4
Sample D Male 54.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 158.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 153.3
Samples: 4

Max nTPM: 158.1
Min nTPM: 144.1
Sample A Male 144.1
Sample B Male 158.1
Sample C Female 155.9
Sample D Female 155.0
Hippocampal formation
nTPM: 158.9
Samples: 4

Max nTPM: 172.6
Min nTPM: 148.9
Sample A Male 172.6
Sample B Male 148.9
Sample C Female 160.0
Sample D Female 154.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
69407505 Antisense, RP_050414_01_G08, Mouse strain C57BL/6J (56 days, male) 7.9

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