HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:4.0 nTPM
HPA Brain:16.0 nTPM
GTEx:4.0 nTPM
FANTOM5:21.7 Scaled Tags Per Million
Mouse:3.7 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023939
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 16.0
Sample id Sample description nTPM
Hippocampus
nTPM: 12.6
1855 Male, age 76, left hemisphere 16.2
2148 Female, age 91, left hemisphere 13.5
1898 Male, age 80, left hemisphere 12.4
1911 Female, age 85, right hemisphere 11.7
2621 Female, age 67, right hemisphere 11.5
2529 Female, age 94, left hemisphere 10.3
Dentate gyrus
nTPM: 12.1
1927 Female, age 91, both hemispheres 14.5
2010 Male, age 76, both hemispheres 13.8
2246 Female, age 85, both hemispheres 13.2
2531 Female, age 67, both hemispheres 12.2
2528 Male, age 74, both hemispheres 10.8
2530 Female, age 94, left hemisphere 8.1
Entorhinal gyrus
nTPM: 11.1
1938 Female, age 85, left hemisphere 12.6
2613 Female, age 94, left hemisphere 12.4
2686 Male, age 75, right hemisphere 11.1
2764 Male, age 80, right hemisphere 10.9
1787 Male, age 76, left hemisphere 10.2
2117 Female, age 91, right hemisphere 9.6
Hippocampus, CA1
nTPM: 16.0
2045 Male, age 76, both hemispheres 23.8
2749 Male, age 80, left hemisphere 18.5
1873 Female, age 85, both hemispheres 13.6
2082 Female, age 91, right hemisphere 12.4
2527 Male, age 74, both hemispheres 11.6
Hippocampus, CA2
nTPM: 13.0
1892 Male, age 76, both hemispheres 20.8
1963 Male, age 80, left hemisphere 14.9
2249 Male, age 74, both hemispheres 11.9
1940 Female, age 85, left hemisphere 11.3
2113 Female, age 91, right hemisphere 11.1
2437 Female, age 94, left hemisphere 8.3
Hippocampus, CA3
nTPM: 14.9
1867 Male, age 76, both hemispheres 19.9
2137 Male, age 80, left hemisphere 17.5
2620 Female, age 94, left hemisphere 17.3
1891 Female, age 85, both hemispheres 11.9
2436 Male, age 74, both hemispheres 11.9
2861 Female, age 67, both hemispheres 11.1
Parahippocampal cortex
nTPM: 11.2
1850 Male, age 80, both hemispheres 12.8
1933 Female, age 85, both hemispheres 12.7
2693 Female, age 94, both hemispheres 12.6
2245 Female, age 91, both hemispheres 12.1
2532 Female, age 72, left hemisphere 11.4
1990 Female, age 91, right hemisphere 10.5
2622 Female, age 67, right hemisphere 10.4
2250 Female, age 67, right hemisphere 10.2
2018 Male, age 76, both hemispheres 10.0
2692 Male, age 74, both hemispheres 9.0
Perirhinal gyrus
nTPM: 13.2
2848 Male, age 76, right hemisphere 14.5
1841 Female, age 85, right hemisphere 13.2
1847 Female, age 91, left hemisphere 13.0
1794 Male, age 80, right hemisphere 12.9
2521 Female, age 94, right hemisphere 12.4
Subiculum
nTPM: 11.7
2042 Male, age 76, both hemispheres 15.7
2729 Female, age 91, right hemisphere 13.3
1901 Male, age 80, both hemispheres 11.7
1977 Female, age 85, both hemispheres 11.7
2619 Male, age 74, both hemispheres 9.5
2438 Female, age 94, left hemisphere 8.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 4.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.0
Samples: 197

Max nTPM: 8.1
Min nTPM: 1.9
Std nTPM: 0.9
Median nTPM: 3.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 8.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 6.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 6.9
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 6.2
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 6.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 6.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 6.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 6.1
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 6.0
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 6.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 5.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 21.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.7
FF:10169-103B7 60 years, female 25.9
FF:10153-102I9 76 years, female 17.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 3.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.5
Samples: 4

Max nTPM: 3.8
Min nTPM: 3.3
Sample A Male 3.3
Sample B Male 3.6
Sample C Female 3.4
Sample D Female 3.8
Hippocampal formation
nTPM: 3.7
Samples: 4

Max nTPM: 4.0
Min nTPM: 3.3
Sample A Male 3.6
Sample B Male 3.3
Sample C Female 4.0
Sample D Female 4.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
75831760 Antisense, RP_060601_02_D09, Mouse strain C57BL/6J (56 days, male) 0.6

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