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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SETD3 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
43.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
42.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
41.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
39.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
37.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
34.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
32.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
32.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
32.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
30.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
30.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
29.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
29.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
29.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
29.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
28.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
28.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
28.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
28.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
28.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
28.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
28.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
28.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
27.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
27.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
27.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
27.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
27.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
27.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
27.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
26.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
26.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
26.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
26.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
26.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
26.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
26.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
26.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
25.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
25.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
25.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
25.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
24.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
24.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
24.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
24.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
24.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
24.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
24.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
24.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
24.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
24.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
23.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
23.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
23.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
23.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
23.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
23.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
23.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
23.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
22.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
22.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
22.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
22.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
22.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
22.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
22.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
22.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
22.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
22.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
22.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
22.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
22.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
21.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
21.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
21.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
21.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
21.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
21.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
21.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
21.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
21.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
21.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
21.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
21.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
21.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
21.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
21.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
21.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
21.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
21.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
20.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
20.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
20.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
20.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
20.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
20.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
20.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
20.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
20.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
20.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
20.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
20.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
20.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
20.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
20.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
20.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
20.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
20.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
19.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
19.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
19.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
19.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
19.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
19.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
19.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
19.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
19.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
19.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
19.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
19.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
19.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
19.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
18.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
18.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
18.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
18.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
18.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
18.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
18.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
18.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
18.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
18.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
18.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
18.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
18.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
18.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
18.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
18.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
18.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
17.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
17.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
17.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
17.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
17.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
17.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
17.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
17.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
17.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
17.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
17.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
17.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
17.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
17.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
17.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
17.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
17.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
17.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
17.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
17.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
17.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
17.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
17.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
17.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
17.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
17.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
17.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
17.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
17.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
17.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
17.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
17.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
16.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
16.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
16.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
16.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
16.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
16.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
16.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
16.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
16.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
16.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
16.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
16.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
16.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
16.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
16.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
16.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
16.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
16.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
16.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
16.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
15.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
15.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
15.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
15.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
15.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
15.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
15.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
15.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
15.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
15.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
15.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
15.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
15.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
15.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
15.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
15.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
15.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
15.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
15.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
15.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
15.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
15.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
15.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
15.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
15.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
15.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
15.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
14.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
14.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
14.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
14.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
14.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
14.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
14.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
14.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
14.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
14.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
14.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
14.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
14.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
14.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
14.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
14.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
14.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
14.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
13.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
13.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
13.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
13.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
13.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
13.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
13.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
13.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
13.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
13.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
13.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
13.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
13.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
13.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
13.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
13.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
13.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
13.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
13.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
13.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
13.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
13.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
13.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
13.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
13.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
13.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
13.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
13.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
13.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
13.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
12.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
12.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
12.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
12.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
12.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
12.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
12.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
12.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
12.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
12.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
12.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
12.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
12.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
12.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
11.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
11.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
11.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
11.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
11.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
11.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
11.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
11.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
11.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
11.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
11.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
11.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
11.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
11.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
11.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
11.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
11.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
10.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
10.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
10.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
10.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
10.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
10.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
10.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
10.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
10.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
10.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
10.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
10.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
10.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
10.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
10.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
10.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
10.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
10.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
10.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
10.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
10.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
10.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
9.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
9.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
9.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
9.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
9.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
9.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
9.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
9.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
9.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
9.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
9.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
9.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
9.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
9.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
8.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
8.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
8.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
7.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
7.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
7.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
7.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
7.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
6.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
6.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
6.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
6.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
6.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
6.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
5.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
5.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SETD3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.8
Number of samples
231
Samples
Sample
Description
TPM
DO23523
0 years, male, NA, stage:3, alive, 1080 days
40.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
37.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
32.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
32.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
32.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
31.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
30.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
30.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
30.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
29.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
29.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
28.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
28.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
28.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
27.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
27.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
26.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
26.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
26.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
26.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
26.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
26.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
26.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
25.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
25.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
25.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
25.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
25.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
24.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
24.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
24.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
24.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
24.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
24.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
24.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
24.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
24.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
23.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
23.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
23.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
23.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
23.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
23.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
23.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
23.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
22.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
22.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
22.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
22.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
22.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
22.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
22.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
22.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
21.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
21.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
21.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
21.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
21.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
21.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
21.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
21.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
21.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
21.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
21.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
21.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
21.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
21.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
21.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
21.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
20.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
20.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
20.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
20.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
20.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
20.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
20.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
20.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
20.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
20.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
20.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
19.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
19.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
19.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
19.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
19.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
19.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
19.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
19.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
19.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
19.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
19.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
19.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
19.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
19.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
19.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
19.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
19.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
18.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
18.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
18.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
18.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
18.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
18.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
18.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
18.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
18.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
18.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
18.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
18.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
18.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
18.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
18.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
18.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
18.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
18.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
18.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
18.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
18.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
18.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
17.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
17.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
17.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
17.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
17.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
17.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
17.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
17.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
17.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
17.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
17.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
17.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
17.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
17.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
17.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
17.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
17.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
17.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
17.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
16.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
16.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
16.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
16.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
16.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
16.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
16.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
16.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
16.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
16.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
16.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
16.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
16.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
16.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
16.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
16.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
16.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
16.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
16.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
16.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
16.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
16.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
16.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
16.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
15.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
15.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
15.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
15.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
15.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
15.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
15.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
15.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
15.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
15.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
15.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
15.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
15.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
15.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
14.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
14.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
14.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
14.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
14.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
14.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
14.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
14.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
14.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
14.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
14.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
14.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
14.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
14.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
14.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
14.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
14.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
14.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
14.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
14.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
14.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
13.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
13.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
13.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
13.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
13.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
13.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
13.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
13.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
13.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
13.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
13.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
13.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
12.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
12.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
12.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
12.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
12.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
12.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
12.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
12.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
12.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
12.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
12.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
12.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
12.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
11.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
11.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
11.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
9.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
9.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
9.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
9.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
8.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
5.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
863
Tumor
0.7
685
Tumor
0.7
227
Tumor
0.7
411
Tumor
0.6
865
Tumor
0.6
285
Tumor
0.6
1027
Tumor
0.5
481
Tumor
0.5
357
Tumor
0.5
261
Tumor
0.5
1043
Tumor
0.4
513
Tumor
0.4
661
Tumor
0.4
427
Tumor
0.4
967
Tumor
0.4
943
Tumor
0.4
713
Tumor
0.4
815
Tumor
0.4
777
Tumor
0.4
861
Tumor
0.4
393
Tumor
0.4
813
Tumor
0.3
421
Tumor
0.3
257
Tumor
0.3
911
Tumor
0.3
975
Tumor
0.3
814
Normal
0.3
737
Tumor
0.3
365
Tumor
0.3
363
Tumor
0.3
981
Tumor
0.3
955
Tumor
0.3
953
Tumor
0.3
515
Tumor
0.3
1015
Tumor
0.3
648
Normal
0.3
497
Tumor
0.3
356
Normal
0.3
852
Normal
0.3
851
Tumor
0.3
978
Normal
0.3
817
Tumor
0.3
311
Tumor
0.3
423
Tumor
0.3
1046
Normal
0.3
697
Tumor
0.2
283
Tumor
0.2
461
Tumor
0.2
864
Normal
0.2
1042
Normal
0.2
857
Tumor
0.2
824
Normal
0.2
663
Tumor
0.2
722
Normal
0.2
277
Tumor
0.2
627
Tumor
0.2
572
Normal
0.2
557
Tumor
0.2
728
Normal
0.2
727
Tumor
0.2
445
Tumor
0.2
222
Normal
0.2
422
Normal
0.2
664
Normal
0.2
862
Normal
0.2
471
Tumor
0.2
666
Normal
0.2
912
Normal
0.2
568
Normal
0.2
954
Normal
0.2
384
Normal
0.2
533
Tumor
0.2
535
Tumor
0.2
868
Normal
0.2
944
Normal
0.2
738
Normal
0.2
195
Tumor
0.2
523
Tumor
0.2
867
Tumor
0.2
617
Tumor
0.2
696
Normal
0.2
228
Normal
0.2
756
Normal
0.2
428
Normal
0.2
1041
Tumor
0.2
464
Normal
0.2
786
Normal
0.2
527
Tumor
0.2
866
Normal
0.2
785
Tumor
0.2
564
Normal
0.2
145
Tumor
0.2
433
Tumor
0.2
546
Normal
0.2
141
Tumor
0.2
463
Tumor
0.2
364
Normal
0.2
1044
Normal
0.2
662
Normal
0.2
361
Tumor
0.2
536
Normal
0.2
412
Normal
0.2
212
Normal
0.2
1016
Normal
0.2
424
Normal
0.2
192
Normal
0.2
884
Normal
0.1
267
Tumor
0.1
976
Normal
0.1
528
Normal
0.1
1032
Normal
0.1
938
Normal
0.1
462
Normal
0.1
358
Normal
0.1
414
Normal
0.1
446
Normal
0.1
918
Normal
0.1
468
Normal
0.1
715
Tumor
0.1
714
Normal
0.1
723
Tumor
0.1
213
Tumor
0.1
474
Normal
0.1
818
Normal
0.1
362
Normal
0.1
232
Normal
0.1
874
Normal
0.1
518
Normal
0.1
286
Normal
0.1
312
Normal
0.1
742
Normal
0.1
214
Normal
0.1
328
Normal
0.1
278
Normal
0.1
196
Normal
0.1
968
Normal
0.1
958
Normal
0.1
472
Normal
0.1
448
Normal
0.1
353
Tumor
0.1
977
Tumor
0.1
641
Tumor
0.1
672
Normal
0.1
816
Normal
0.1
628
Normal
0.1
858
Normal
0.1
956
Normal
0.1
416
Normal
0.1
618
Normal
0.1
162
Normal
0.1
314
Normal
0.1
125
Tumor
0.1
188
Normal
0.1
917
Tumor
0.1
478
Normal
0.1
455
Tumor
0.1
534
Normal
0.1
191
Tumor
0.1
126
Normal
0.1
558
Normal
0.1
138
Normal
0.1
964
Normal
0.1
432
Normal
0.1
1014
Normal
0.1
132
Normal
0.1
135
Tumor
0.1
298
Normal
0.1
1026
Normal
0.1
218
Normal
0.1
297
Tumor
0.1
262
Normal
0.1
695
Tumor
0.1
716
Normal
0.1
965
Tumor
0.1
963
Tumor
0.1
514
Normal
0.1
342
Normal
0.1
482
Normal
0.1
966
Normal
0.1
873
Tumor
0.1
284
Normal
0.1
494
Normal
0.1
926
Normal
0.1
231
Tumor
0.1
984
Normal
0.1
137
Tumor
0.1
131
Tumor
0.1
114
Normal
0.1
823
Tumor
0.1
466
Normal
0.1
444
Normal
0.1
698
Normal
0.1
882
Normal
0.1
881
Tumor
0.1
385
Tumor
0.1
217
Tumor
0.1
258
Normal
0.1
467
Tumor
0.1
376
Normal
0.1
616
Normal
0.1
526
Normal
0.1
375
Tumor
0.1
142
Normal
0.1
426
Normal
0.1
128
Normal
0.1
1022
Normal
0.1
524
Normal
0.1
413
Tumor
0.1
493
Tumor
0.1
434
Normal
0.1
332
Normal
0.1
636
Normal
0.1
878
Normal
0.1
473
Tumor
0.1
368
Normal
0.1
574
Normal
0.0
211
Tumor
0.0
484
Normal
0.0
553
Tumor
0.0
877
Tumor
0.0
354
Normal
0.0
498
Normal
0.0
271
Tumor
0.0
272
Normal
0.0
187
Tumor
0.0
982
Normal
0.0
755
Tumor
0.0
957
Tumor
0.0
567
Tumor
0.0
665
Tumor
0.0
1028
Normal
0.0
436
Normal
0.0
746
Normal
0.0
146
Normal
0.0
554
Normal
0.0
615
Tumor
0.0
647
Tumor
0.0
492
Normal
0.0
456
Normal
0.0
172
Normal
0.0
268
Normal
0.0
914
Normal
0.0
571
Tumor
0.0
1045
Tumor
0.0
431
Tumor
0.0
721
Tumor
0.0
111
Normal
0.0
671
Tumor
0.0
642
Normal
0.0
488
Normal
0.0
112
Tumor
0.0
743
Tumor
0.0
388
Normal
0.0
916
Normal
0.0
913
Tumor
0.0
952
Normal
0.0
741
Tumor
0.0
221
Tumor
0.0
352
Normal
0.0
778
Normal
0.0
186
Normal
0.0
686
Normal
0.0
148
Normal
0.0
386
Normal
0.0
343
Tumor
0.0
447
Tumor
0.0
223
Tumor
0.0
922
Normal
0.0
366
Normal
0.0
124
Normal
0.0
396
Normal
0.0
744
Normal
0.0
924
Normal
-0.1
516
Normal
-0.1
394
Normal
-0.1
224
Normal
-0.1
344
Normal
-0.1
392
Normal
-0.1
538
Normal
-0.1
127
Tumor
-0.1
452
Normal
-0.1
313
Tumor
-0.1
537
Tumor
-0.1
415
Tumor
-0.1
147
Tumor
-0.1
136
Normal
-0.1
351
Tumor
-0.1
171
Tumor
-0.1
435
Tumor
-0.1
745
Tumor
-0.1
491
Tumor
-0.1
724
Normal
-0.1
983
Tumor
-0.1
383
Tumor
-0.1
355
Tumor
-0.1
563
Tumor
-0.1
395
Tumor
-0.1
331
Tumor
-0.1
387
Tumor
-0.1
545
Tumor
-0.2
883
Tumor
-0.2
113
Tumor
-0.2
185
Tumor
-0.2
451
Tumor
-0.2
341
Tumor
-0.2
937
Tumor
-0.2
161
Tumor
-0.2
1025
Tumor
-0.2
425
Tumor
-0.3
573
Tumor
-0.3
923
Tumor
-0.3
443
Tumor
-0.3
391
Tumor
-0.3
327
Tumor
-0.3
1031
Tumor
-0.3
517
Tumor
-0.3
525
Tumor
-0.3
921
Tumor
-0.3
1013
Tumor
-0.3
951
Tumor
-0.3
367
Tumor
-0.4
1021
Tumor
-0.4
915
Tumor
-0.4
635
Tumor
-0.4
487
Tumor
-0.5
483
Tumor
-0.5
465
Tumor
-0.5
925
Tumor
-0.7
123
Tumor
-0.7
477
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
