AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:6.2 nTPM
HPA Brain:9.4 nTPM
GTEx:6.2 nTPM
FANTOM5:31.5 Scaled Tags Per Million
Pig:18.3 nTPM
Mouse:21.2 nTPM
Allen mouse:3.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Brain excitatory neuronsBrain inhibitory neuronsOther brain neuronsAstrocytesBergmann gliaOligodendrocyte progenitor cellsOligodendrocytesMicrogliaEpendymal cellsChoroid plexus epithelial cellsVascular endothelial cellsPericytesVascular smooth muscle cellsFibroblastsMonocytesMacrophagesT-cellsB-cellsNK-cells05101520nCPM

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi 9.4
Sample id Sample description nTPM
Amygdala
nTPM: 7.5
1987 Female, age 91, left hemisphere 8.8
2814 Male, age 76, right hemisphere 8.8
2695 Female, age 67, right hemisphere 7.4
2517 Female, age 94, left hemisphere 6.5
2514 Male, age 75, right hemisphere 5.9
Basal amygdala
nTPM: 8.6
2110 Male, age 80, left hemisphere 10.7
2685 Female, age 94, left hemisphere 9.8
2243 Female, age 91, right hemisphere 9.5
2827 Female, age 67, right hemisphere 8.1
1955 Male, age 76, both hemispheres 7.9
2609 Male, age 75, right hemisphere 5.3
Central amygdala
nTPM: 8.1
2701 Female, age 91, right hemisphere 10.0
2239 Male, age 80, left hemisphere 9.5
1905 Male, age 76, both hemispheres 8.4
2515 Male, age 75, right hemisphere 6.3
2826 Female, age 94, left hemisphere 6.3
Corticomedial amygdala
nTPM: 9.4
2535 Female, age 67, right hemisphere 11.7
2242 Female, age 91, right hemisphere 10.8
2429 Female, age 94, left hemisphere 10.6
2240 Male, age 76, both hemispheres 9.4
2829 Male, age 80, left hemisphere 8.3
2428 Male, age 75, right hemisphere 5.7
Lateral amygdala
nTPM: 7.3
2534 Female, age 94, left hemisphere 8.9
2255 Female, age 91, right hemisphere 8.1
1883 Male, age 76, both hemispheres 7.8
2256 Male, age 80, left hemisphere 7.6
2516 Male, age 75, right hemisphere 5.9
2830 Female, age 67, right hemisphere 5.8

AMYGDALA - GTEx RNA-seqi
Max subtype nTPMi 6.2
GTEx sample id Sample description nTPM
4.95.87.61.810.802468101214
Brain - Amygdala
Average nTPM: 6.2
Samples: 181

Max nTPM: 14.3
Min nTPM: 1.8
Std nTPM: 2.0
Median nTPM: 5.8
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 14.3
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 13.2
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 10.8
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 10.5
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 10.4
GTEX-1JMOU-0011-R4b-SM-EY5ZL 60-69 years, female 10.3
GTEX-1PWST-0011-R4a-SM-F2T9X 70-79 years, male 10.3
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 10.2
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 10.0
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 9.9
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 9.4
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AMYGDALA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 31.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 31.5
FF:10151-102I7 76 years, female 31.5

AMYGDALA - Pig RNA-seqi
Max subtype nTPMi 18.3
Pig sample Sample description nTPM
17.318.119.116.120.902468101214161820
 		Amygdala
nTPM: 18.3
Samples: 4

Max nTPM: 20.9
Min nTPM: 16.1
Sample A Female 20.9
Sample B Female 18.5
Sample C Male 16.1
Sample D Male 17.7

AMYGDALA - Mouse RNA-seqi
Max subtype nTPMi 21.2
Mouse sample Sample description nTPM
20.321.322.119.822.50246810121416182022
 		Amygdala
nTPM: 21.2
Samples: 4

Max nTPM: 22.5
Min nTPM: 19.8
Sample A Male 19.8
Sample B Male 22.5
Sample C Female 20.5
Sample D Female 22.0

AMYGDALA - Allen Mouse ISHi
Max subtype Expression energyi 3.1
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 3.1
77454963 Antisense, RP_070129_01_E06, Mouse strain C57BL/6J (56 days, male) 3.1

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