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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SELENOF is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
87.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
373.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
258.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
224.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
218.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
210.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
208.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
203.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
199.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
193.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
185.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
175.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
173.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
156.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
156.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
155.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
154.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
152.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
151.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
148.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
145.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
144.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
143.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
142.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
140.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
140.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
140.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
140.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
139.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
138.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
136.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
134.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
133.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
132.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
130.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
129.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
129.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
126.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
125.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
125.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
125.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
124.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
123.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
122.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
122.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
122.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
121.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
121.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
121.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
121.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
121.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
120.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
120.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
120.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
120.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
120.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
119.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
119.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
118.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
118.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
117.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
117.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
117.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
116.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
116.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
115.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
114.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
113.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
112.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
112.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
111.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
111.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
111.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
111.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
110.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
110.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
109.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
109.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
109.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
109.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
109.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
108.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
108.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
107.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
107.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
106.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
106.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
105.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
105.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
104.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
104.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
103.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
102.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
102.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
102.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
101.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
101.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
101.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
101.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
100.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
100.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
100.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
99.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
99.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
99.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
99.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
98.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
98.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
98.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
98.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
98.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
98.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
98.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
98.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
97.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
97.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
96.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
96.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
96.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
95.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
95.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
94.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
94.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
94.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
93.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
93.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
93.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
92.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
92.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
92.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
92.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
91.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
91.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
91.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
91.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
91.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
90.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
90.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
90.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
90.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
89.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
89.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
89.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
89.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
89.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
88.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
88.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
88.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
88.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
88.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
88.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
87.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
87.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
87.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
87.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
87.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
87.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
86.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
86.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
86.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
86.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
86.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
85.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
85.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
85.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
85.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
85.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
84.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
84.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
84.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
84.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
84.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
83.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
83.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
83.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
83.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
82.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
82.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
82.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
82.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
82.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
81.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
81.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
81.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
81.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
80.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
80.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
80.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
80.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
80.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
80.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
80.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
79.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
79.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
79.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
79.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
79.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
79.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
79.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
79.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
79.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
79.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
77.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
77.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
77.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
77.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
77.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
77.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
77.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
76.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
76.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
76.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
76.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
76.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
76.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
75.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
75.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
75.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
75.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
75.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
74.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
74.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
73.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
73.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
73.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
73.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
72.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
72.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
72.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
72.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
72.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
72.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
72.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
72.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
72.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
72.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
72.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
71.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
71.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
71.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
70.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
70.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
70.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
70.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
69.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
69.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
69.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
69.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
69.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
68.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
68.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
68.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
68.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
68.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
68.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
67.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
67.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
67.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
67.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
67.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
67.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
66.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
66.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
66.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
65.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
65.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
65.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
65.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
65.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
65.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
64.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
64.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
64.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
64.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
64.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
63.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
63.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
63.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
63.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
63.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
62.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
62.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
62.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
62.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
61.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
61.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
61.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
61.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
61.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
60.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
60.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
59.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
58.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
58.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
57.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
57.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
57.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
57.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
56.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
56.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
56.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
56.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
55.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
55.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
54.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
54.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
53.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
53.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
53.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
53.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
53.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
53.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
52.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
52.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
52.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
52.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
52.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
52.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
52.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
51.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
51.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
51.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
50.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
49.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
49.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
49.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
48.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
48.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
48.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
48.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
47.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
47.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
47.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
45.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
45.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
44.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
44.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
44.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
43.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
43.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
43.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
42.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
41.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
40.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
40.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
40.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
40.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
40.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
38.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
38.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
36.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
34.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
33.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
33.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
31.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
31.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
31.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
30.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
30.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
29.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
27.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
24.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
554
Normal
0.9
698
Normal
0.8
944
Normal
0.8
131
Tumor
0.8
1046
Normal
0.7
492
Normal
0.7
518
Normal
0.7
742
Normal
0.7
696
Normal
0.7
723
Tumor
0.7
538
Normal
0.6
746
Normal
0.6
938
Normal
0.6
695
Tumor
0.6
484
Normal
0.6
922
Normal
0.5
738
Normal
0.5
545
Tumor
0.5
1022
Normal
0.5
342
Normal
0.5
744
Normal
0.5
714
Normal
0.5
546
Normal
0.5
954
Normal
0.5
636
Normal
0.5
862
Normal
0.5
686
Normal
0.5
857
Tumor
0.5
278
Normal
0.5
534
Normal
0.5
1044
Normal
0.5
866
Normal
0.5
448
Normal
0.5
926
Normal
0.5
211
Tumor
0.4
517
Tumor
0.4
648
Normal
0.4
526
Normal
0.4
925
Tumor
0.4
1014
Normal
0.4
914
Normal
0.4
298
Normal
0.4
1032
Normal
0.4
172
Normal
0.4
514
Normal
0.4
488
Normal
0.4
536
Normal
0.4
494
Normal
0.4
114
Normal
0.4
124
Normal
0.4
436
Normal
0.4
232
Normal
0.4
878
Normal
0.4
924
Normal
0.4
918
Normal
0.4
426
Normal
0.4
111
Normal
0.4
956
Normal
0.4
911
Tumor
0.4
228
Normal
0.4
728
Normal
0.4
721
Tumor
0.4
955
Tumor
0.4
874
Normal
0.4
284
Normal
0.4
358
Normal
0.4
128
Normal
0.4
864
Normal
0.3
981
Tumor
0.3
286
Normal
0.3
662
Normal
0.3
466
Normal
0.3
474
Normal
0.3
516
Normal
0.3
376
Normal
0.3
186
Normal
0.3
816
Normal
0.3
148
Normal
0.3
917
Tumor
0.3
952
Normal
0.3
1028
Normal
0.3
498
Normal
0.3
1015
Tumor
0.3
524
Normal
0.3
916
Normal
0.3
868
Normal
0.3
616
Normal
0.3
1016
Normal
0.3
1026
Normal
0.3
618
Normal
0.3
727
Tumor
0.3
716
Normal
0.3
984
Normal
0.3
912
Normal
0.3
412
Normal
0.3
852
Normal
0.3
966
Normal
0.3
212
Normal
0.3
976
Normal
0.3
642
Normal
0.2
162
Normal
0.2
445
Tumor
0.2
487
Tumor
0.2
937
Tumor
0.2
258
Normal
0.2
136
Normal
0.2
968
Normal
0.2
713
Tumor
0.2
132
Normal
0.2
314
Normal
0.2
786
Normal
0.2
477
Tumor
0.2
724
Normal
0.2
858
Normal
0.2
222
Normal
0.2
568
Normal
0.2
572
Normal
0.2
138
Normal
0.2
982
Normal
0.2
395
Tumor
0.2
332
Normal
0.2
778
Normal
0.2
1042
Normal
0.2
525
Tumor
0.2
394
Normal
0.2
1025
Tumor
0.2
785
Tumor
0.2
482
Normal
0.2
722
Normal
0.2
462
Normal
0.2
628
Normal
0.2
354
Normal
0.2
915
Tumor
0.1
422
Normal
0.1
537
Tumor
0.1
262
Normal
0.1
414
Normal
0.1
362
Normal
0.1
921
Tumor
0.1
978
Normal
0.1
468
Normal
0.1
113
Tumor
0.1
882
Normal
0.1
558
Normal
0.1
196
Normal
0.1
481
Tumor
0.1
392
Normal
0.1
824
Normal
0.1
218
Normal
0.1
963
Tumor
0.1
743
Tumor
0.1
352
Normal
0.1
672
Normal
0.1
666
Normal
0.1
665
Tumor
0.1
223
Tumor
0.1
393
Tumor
0.1
388
Normal
0.1
535
Tumor
0.1
142
Normal
0.1
344
Normal
0.1
214
Normal
0.1
396
Normal
0.1
965
Tumor
0.1
452
Normal
0.1
958
Normal
0.1
472
Normal
0.1
615
Tumor
0.1
272
Normal
0.1
224
Normal
0.1
741
Tumor
0.1
964
Normal
0.1
755
Tumor
0.1
432
Normal
0.1
478
Normal
0.1
145
Tumor
0.0
685
Tumor
0.0
188
Normal
0.0
943
Tumor
0.0
126
Normal
0.0
957
Tumor
0.0
483
Tumor
0.0
574
Normal
0.0
366
Normal
0.0
435
Tumor
0.0
737
Tumor
0.0
364
Normal
0.0
528
Normal
0.0
975
Tumor
0.0
456
Normal
0.0
533
Tumor
0.0
428
Normal
0.0
491
Tumor
0.0
283
Tumor
0.0
564
Normal
0.0
146
Normal
0.0
823
Tumor
0.0
664
Normal
0.0
1045
Tumor
0.0
464
Normal
0.0
356
Normal
0.0
434
Normal
0.0
312
Normal
0.0
1043
Tumor
0.0
427
Tumor
0.0
341
Tumor
-0.1
884
Normal
-0.1
873
Tumor
-0.1
368
Normal
-0.1
268
Normal
-0.1
297
Tumor
-0.1
745
Tumor
-0.1
715
Tumor
-0.1
343
Tumor
-0.1
446
Normal
-0.1
328
Normal
-0.1
444
Normal
-0.1
635
Tumor
-0.1
573
Tumor
-0.1
386
Normal
-0.1
185
Tumor
-0.1
384
Normal
-0.2
351
Tumor
-0.2
497
Tumor
-0.2
1031
Tumor
-0.2
465
Tumor
-0.2
661
Tumor
-0.2
863
Tumor
-0.2
861
Tumor
-0.2
818
Normal
-0.2
135
Tumor
-0.2
424
Normal
-0.2
471
Tumor
-0.2
817
Tumor
-0.2
311
Tumor
-0.2
1041
Tumor
-0.2
195
Tumor
-0.3
867
Tumor
-0.3
913
Tumor
-0.3
387
Tumor
-0.3
756
Normal
-0.3
467
Tumor
-0.3
447
Tumor
-0.3
365
Tumor
-0.3
627
Tumor
-0.3
443
Tumor
-0.3
192
Normal
-0.3
277
Tumor
-0.3
493
Tumor
-0.3
515
Tumor
-0.3
923
Tumor
-0.3
415
Tumor
-0.3
527
Tumor
-0.3
112
Tumor
-0.3
473
Tumor
-0.3
617
Tumor
-0.3
271
Tumor
-0.3
137
Tumor
-0.4
261
Tumor
-0.4
553
Tumor
-0.4
191
Tumor
-0.4
881
Tumor
-0.4
267
Tumor
-0.4
383
Tumor
-0.4
461
Tumor
-0.4
125
Tumor
-0.4
455
Tumor
-0.4
523
Tumor
-0.4
416
Normal
-0.4
227
Tumor
-0.4
217
Tumor
-0.4
1021
Tumor
-0.4
967
Tumor
-0.4
327
Tumor
-0.4
647
Tumor
-0.4
361
Tumor
-0.4
355
Tumor
-0.4
161
Tumor
-0.5
127
Tumor
-0.5
257
Tumor
-0.5
353
Tumor
-0.5
697
Tumor
-0.5
285
Tumor
-0.5
367
Tumor
-0.5
187
Tumor
-0.5
865
Tumor
-0.5
883
Tumor
-0.5
813
Tumor
-0.5
425
Tumor
-0.5
147
Tumor
-0.5
421
Tumor
-0.5
423
Tumor
-0.5
977
Tumor
-0.6
563
Tumor
-0.6
1013
Tumor
-0.6
513
Tumor
-0.6
851
Tumor
-0.6
557
Tumor
-0.6
123
Tumor
-0.6
877
Tumor
-0.6
451
Tumor
-0.6
331
Tumor
-0.6
231
Tumor
-0.6
1027
Tumor
-0.6
385
Tumor
-0.6
433
Tumor
-0.6
983
Tumor
-0.6
814
Normal
-0.7
463
Tumor
-0.7
213
Tumor
-0.7
357
Tumor
-0.7
567
Tumor
-0.7
641
Tumor
-0.7
363
Tumor
-0.7
951
Tumor
-0.7
221
Tumor
-0.7
413
Tumor
-0.8
411
Tumor
-0.8
171
Tumor
-0.8
431
Tumor
-0.8
391
Tumor
-0.9
777
Tumor
-0.9
953
Tumor
-0.9
815
Tumor
-0.9
141
Tumor
-0.9
671
Tumor
-0.9
313
Tumor
-1.0
571
Tumor
-1.0
375
Tumor
-1.1
663
Tumor
-1.4
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.