HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:38.5 nTPM
HPA Brain:60.6 nTPM
GTEx:38.5 nTPM
FANTOM5:44.7 Scaled Tags Per Million
Pig:10.9 nTPM
Mouse:2.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023861Antibody HPA026536
Glial cells MediumNot detected
Neuronal cells MediumNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 60.6
Sample id Sample description nTPM
Hippocampus
nTPM: 45.6
1911 Female, age 85, right hemisphere 64.8
2529 Female, age 94, left hemisphere 44.5
2621 Female, age 67, right hemisphere 42.1
2148 Female, age 91, left hemisphere 41.7
1855 Male, age 76, left hemisphere 41.1
1898 Male, age 80, left hemisphere 39.1
Dentate gyrus
nTPM: 51.5
2530 Female, age 94, left hemisphere 71.0
2010 Male, age 76, both hemispheres 62.5
2246 Female, age 85, both hemispheres 52.0
2528 Male, age 74, both hemispheres 44.6
2531 Female, age 67, both hemispheres 41.5
1927 Female, age 91, both hemispheres 37.4
Entorhinal gyrus
nTPM: 54.6
2764 Male, age 80, right hemisphere 68.2
2117 Female, age 91, right hemisphere 58.5
2613 Female, age 94, left hemisphere 54.7
1787 Male, age 76, left hemisphere 54.3
2686 Male, age 75, right hemisphere 46.8
1938 Female, age 85, left hemisphere 44.9
Hippocampus, CA1
nTPM: 42.5
2082 Female, age 91, right hemisphere 48.9
2749 Male, age 80, left hemisphere 46.7
1873 Female, age 85, both hemispheres 44.4
2527 Male, age 74, both hemispheres 41.7
2045 Male, age 76, both hemispheres 31.0
Hippocampus, CA2
nTPM: 48.8
1963 Male, age 80, left hemisphere 56.3
1940 Female, age 85, left hemisphere 53.8
2113 Female, age 91, right hemisphere 47.9
2437 Female, age 94, left hemisphere 47.0
2249 Male, age 74, both hemispheres 45.6
1892 Male, age 76, both hemispheres 42.0
Hippocampus, CA3
nTPM: 46.4
1891 Female, age 85, both hemispheres 64.5
1867 Male, age 76, both hemispheres 63.6
2137 Male, age 80, left hemisphere 51.5
2861 Female, age 67, both hemispheres 34.3
2436 Male, age 74, both hemispheres 32.8
2620 Female, age 94, left hemisphere 31.6
Parahippocampal cortex
nTPM: 51.5
2018 Male, age 76, both hemispheres 65.2
2532 Female, age 72, left hemisphere 64.2
2692 Male, age 74, both hemispheres 61.4
1990 Female, age 91, right hemisphere 55.8
1850 Male, age 80, both hemispheres 53.3
1933 Female, age 85, both hemispheres 53.3
2245 Female, age 91, both hemispheres 45.3
2693 Female, age 94, both hemispheres 43.7
2622 Female, age 67, right hemisphere 39.7
2250 Female, age 67, right hemisphere 32.9
Perirhinal gyrus
nTPM: 44.3
2521 Female, age 94, right hemisphere 48.6
2848 Male, age 76, right hemisphere 45.4
1794 Male, age 80, right hemisphere 43.6
1847 Female, age 91, left hemisphere 43.6
1841 Female, age 85, right hemisphere 40.3
Subiculum
nTPM: 60.6
2042 Male, age 76, both hemispheres 83.7
1901 Male, age 80, both hemispheres 68.3
2438 Female, age 94, left hemisphere 59.5
1977 Female, age 85, both hemispheres 58.5
2619 Male, age 74, both hemispheres 52.5
2729 Female, age 91, right hemisphere 41.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 38.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.5
Samples: 197

Max nTPM: 138.3
Min nTPM: 12.4
Std nTPM: 18.2
Median nTPM: 35.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 138.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 108.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 87.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 83.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 79.9
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 79.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 77.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 77.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 76.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 73.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 72.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 44.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.7
FF:10169-103B7 60 years, female 50.8
FF:10153-102I9 76 years, female 38.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 10.9
Pig sample Sample description nTPM
Subiculum
nTPM: 10.2
Samples: 4

Max nTPM: 11.6
Min nTPM: 7.4
Sample A Female 7.4
Sample B Female 10.7
Sample C Male 11.6
Sample D Male 11.2
Dorsal hippocampus
nTPM: 9.7
Samples: 4

Max nTPM: 11.3
Min nTPM: 8.7
Sample A Female 9.0
Sample B Female 11.3
Sample C Male 8.7
Sample D Male 9.6
Entorhinal cortex
nTPM: 10.9
Samples: 4

Max nTPM: 12.8
Min nTPM: 8.9
Sample A Female 8.9
Sample B Female 12.8
Sample C Male 11.3
Sample D Male 10.5
Ventral hippocampus
nTPM: 10.9
Samples: 4

Max nTPM: 12.2
Min nTPM: 8.5
Sample A Female 8.5
Sample B Female 11.7
Sample C Male 12.2
Sample D Male 11.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 2.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.1
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.7
Sample A Male 1.7
Sample B Male 2.2
Sample C Female 2.4
Sample D Female 1.9
Hippocampal formation
nTPM: 1.2
Samples: 4

Max nTPM: 2.0
Min nTPM: 0.6
Sample A Male 2.0
Sample B Male 0.6
Sample C Female 0.9
Sample D Female 1.1

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