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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPNS2 is potential prognostic, high expression is favorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
8.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
8.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
7.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
6.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
5.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
4.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
4.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
3.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
3.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
3.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
3.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
3.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
3.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
2.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
2.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
1.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
1.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
1.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
1.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
1.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
1.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
1.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
1.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPNS2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
134.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
108.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
73.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
64.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
60.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
59.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
56.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
56.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
55.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
54.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
54.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
53.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
53.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
51.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
50.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
49.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
49.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
48.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
47.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
46.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
45.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
45.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
44.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
44.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
44.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
44.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
44.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
44.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
43.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
43.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
43.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
43.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
42.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
42.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
41.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
41.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
41.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
41.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
40.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
39.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
39.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
38.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
38.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
38.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
38.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
38.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
37.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
37.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
37.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
37.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
36.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
36.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
36.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
35.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
35.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
35.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
35.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
35.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
35.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
34.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
34.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
34.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
34.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
33.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
33.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
33.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
33.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
32.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
32.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
32.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
32.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
32.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
32.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
32.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
31.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
31.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
31.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
31.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
31.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
31.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
30.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
30.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
30.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
30.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
30.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
30.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
29.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
29.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
29.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
29.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
29.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
29.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
29.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
29.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
29.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
29.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
29.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
29.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
29.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
28.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
28.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
28.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
28.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
28.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
28.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
28.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
28.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
28.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
28.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
28.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
28.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
28.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
28.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
27.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
27.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
27.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
27.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
27.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
27.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
27.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
27.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
27.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
27.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
27.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
27.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
27.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
27.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
27.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
27.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
27.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
27.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
27.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
26.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
26.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
26.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
26.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
26.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
26.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
26.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
25.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
25.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
25.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
25.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
25.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
25.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
25.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
25.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
24.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
24.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
24.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
24.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
24.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
24.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
24.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
24.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
24.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
24.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
24.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
24.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
24.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
24.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
23.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
23.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
23.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
23.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
23.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
23.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
23.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
23.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
23.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
23.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
23.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
23.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
23.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
22.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
22.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
22.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
22.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
22.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
22.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
22.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
21.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
21.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
21.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
21.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
21.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
21.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
21.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
21.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
21.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
21.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
21.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
21.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
20.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
20.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
20.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
20.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
20.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
20.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
20.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
20.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
20.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
20.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
20.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
20.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
20.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
19.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
19.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
19.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
19.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
19.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
19.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
19.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
19.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
19.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
19.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
19.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
19.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
18.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
18.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
18.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
18.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
18.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
18.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
18.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
18.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
18.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
18.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
18.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
18.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
18.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
18.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
18.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
17.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
17.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
17.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
17.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
17.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
17.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
17.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
16.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
16.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
16.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
16.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
16.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
16.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
16.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
16.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
16.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
16.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
16.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
16.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
15.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
15.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
15.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
15.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
15.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
15.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
15.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
14.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
14.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
14.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
14.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
14.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
14.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
14.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
14.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
14.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
14.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
14.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
14.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
13.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
13.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
13.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
13.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
13.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
13.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
13.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
13.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
13.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
12.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
12.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
12.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
12.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
12.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
12.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
12.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
12.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
11.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
11.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
11.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
11.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
10.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
10.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
10.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
10.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
10.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
10.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
10.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
9.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
9.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
9.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
9.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
9.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
9.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
8.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
8.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
8.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
8.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
8.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
8.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
8.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
8.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
8.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
8.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
8.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
7.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
7.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
7.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
7.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
7.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
7.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
6.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
6.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
6.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
6.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
6.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
6.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
6.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
6.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
5.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
5.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
5.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
5.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
5.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
5.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
5.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
5.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
4.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
4.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
4.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
4.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
4.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
4.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
4.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
4.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
4.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
4.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
4.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
3.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
3.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
3.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
3.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
3.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
3.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
3.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
3.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
3.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
2.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
2.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
2.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
2.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
2.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
2.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
2.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
1.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
1.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
1.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
1.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
1.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
0.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
0.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPNS2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
69.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
63.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
59.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
54.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
47.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
47.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
46.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
43.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
43.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
41.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
41.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
41.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
41.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
41.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
41.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
41.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
41.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
39.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
37.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
36.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
36.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
35.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
35.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
34.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
34.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
33.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
33.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
32.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
31.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
31.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
31.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
30.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
30.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
29.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
29.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
29.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
28.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
27.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
27.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
27.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
26.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
26.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
26.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
26.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
26.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
25.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
24.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
24.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
22.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
22.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
21.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
20.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
20.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
19.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
18.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
18.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
17.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
16.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
16.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
16.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
15.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
14.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
12.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
12.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
12.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
11.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
11.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
10.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
10.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
10.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
10.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
10.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
10.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
8.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
8.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
7.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
6.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
6.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
6.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
5.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
4.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
4.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
4.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
2.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPNS2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
174.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
145.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
84.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
83.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
78.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
75.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
74.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
71.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
68.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
65.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
64.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
63.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
63.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
59.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
58.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
55.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
54.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
53.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
49.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
49.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
48.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
47.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
46.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
45.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
44.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
43.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
42.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
41.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
40.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
38.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
38.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
37.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
37.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
37.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
36.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
35.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
35.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
35.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
34.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
34.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
34.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
34.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
33.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
32.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
31.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
31.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
31.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
30.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
30.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
29.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
29.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
28.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
27.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
27.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
27.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
27.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
26.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
26.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
25.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
25.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
24.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
24.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
24.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
24.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
24.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
23.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
23.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
23.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
23.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
23.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
22.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
22.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
21.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
21.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
20.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
20.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
20.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
20.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
20.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
20.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
19.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
19.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
19.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
19.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
19.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
19.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
18.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
17.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
17.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
17.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
17.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
17.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
17.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
16.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
16.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
16.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
16.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
16.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
16.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
16.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
15.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
15.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
15.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
15.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
15.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
15.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
15.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
15.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
15.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
15.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
14.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
14.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
14.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
14.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
13.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
13.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
13.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
12.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
12.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
12.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
12.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
12.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
12.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
11.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
11.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
11.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
11.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
11.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
11.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
11.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
10.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
10.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
10.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
10.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
9.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
9.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
9.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
9.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
9.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
9.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
8.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
8.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
8.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
8.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
8.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
8.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
8.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
8.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
8.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
8.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
7.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
7.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
7.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
7.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
7.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
7.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
7.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
7.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
6.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
6.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
6.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
6.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
6.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
6.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
6.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
6.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
6.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
6.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
5.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
5.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
5.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
5.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
5.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
5.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
5.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
5.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
5.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
4.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
4.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
4.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
4.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
4.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
4.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
4.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
4.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
4.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
4.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
4.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
4.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
3.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
3.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
3.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
3.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
3.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
2.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
2.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
2.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
2.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
2.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
2.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
2.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
2.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
2.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
1.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
1.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
0.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
0.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
