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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SRPRA is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
68.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
232.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
223.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
167.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
164.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
163.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
155.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
138.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
138.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
138.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
136.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
135.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
135.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
133.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
133.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
132.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
131.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
128.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
127.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
127.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
125.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
125.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
122.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
122.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
118.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
116.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
116.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
115.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
114.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
114.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
114.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
113.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
111.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
108.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
107.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
105.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
104.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
103.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
103.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
102.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
102.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
102.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
101.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
101.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
100.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
100.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
100.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
100.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
99.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
99.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
99.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
98.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
98.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
98.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
98.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
98.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
97.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
97.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
96.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
96.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
96.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
96.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
95.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
95.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
95.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
94.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
94.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
94.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
93.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
93.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
93.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
93.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
93.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
92.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
92.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
91.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
91.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
90.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
90.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
90.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
89.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
89.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
89.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
89.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
89.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
88.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
88.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
88.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
86.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
86.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
86.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
85.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
85.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
85.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
85.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
84.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
84.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
84.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
84.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
83.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
83.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
83.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
83.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
83.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
83.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
83.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
82.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
82.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
81.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
81.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
81.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
81.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
81.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
81.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
80.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
80.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
80.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
80.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
79.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
79.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
79.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
79.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
78.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
78.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
78.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
77.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
77.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
76.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
76.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
76.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
76.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
75.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
75.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
75.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
75.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
74.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
74.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
74.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
73.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
73.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
73.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
73.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
72.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
72.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
72.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
71.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
71.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
71.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
71.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
71.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
71.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
71.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
71.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
70.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
70.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
70.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
70.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
69.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
69.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
69.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
69.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
69.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
69.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
69.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
69.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
69.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
68.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
68.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
68.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
67.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
67.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
67.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
67.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
67.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
66.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
65.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
65.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
65.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
65.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
64.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
64.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
64.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
64.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
64.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
64.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
64.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
64.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
63.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
63.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
63.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
63.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
63.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
63.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
63.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
62.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
62.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
62.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
62.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
62.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
62.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
62.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
62.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
62.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
62.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
62.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
60.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
60.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
60.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
60.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
60.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
59.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
59.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
59.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
59.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
58.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
58.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
58.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
58.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
58.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
58.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
57.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
57.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
57.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
57.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
57.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
57.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
56.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
56.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
56.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
56.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
56.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
56.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
56.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
55.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
55.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
55.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
55.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
55.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
54.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
54.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
54.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
54.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
53.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
53.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
53.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
53.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
52.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
52.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
52.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
52.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
52.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
52.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
51.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
51.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
51.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
51.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
50.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
50.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
49.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
49.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
49.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
48.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
48.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
48.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
48.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
47.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
47.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
47.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
46.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
46.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
45.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
45.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
45.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
45.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
45.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
45.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
45.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
44.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
44.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
44.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
43.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
43.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
43.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
42.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
42.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
41.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
41.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
41.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
40.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
40.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
40.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
40.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
40.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
39.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
39.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
39.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
38.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
38.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
38.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
37.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
37.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
37.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
37.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
36.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
36.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
36.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
35.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
35.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
34.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
34.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
34.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
34.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
34.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
34.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
34.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
34.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
34.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
33.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
33.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
33.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
33.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
33.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
33.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
33.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
32.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
32.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
31.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
31.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
31.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
30.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
30.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
30.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
29.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
29.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
29.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
28.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
28.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
27.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
26.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
26.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
26.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
25.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
25.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
24.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
24.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
24.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
24.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
24.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
23.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
23.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
23.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
22.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
22.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
22.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
21.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
20.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
20.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
20.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
18.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
18.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
14.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
11.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
327
Tumor
0.9
741
Tumor
0.8
851
Tumor
0.6
1021
Tumor
0.6
171
Tumor
0.5
647
Tumor
0.5
473
Tumor
0.5
863
Tumor
0.5
867
Tumor
0.5
911
Tumor
0.5
728
Normal
0.5
746
Normal
0.5
537
Tumor
0.5
353
Tumor
0.4
862
Normal
0.4
341
Tumor
0.4
745
Tumor
0.4
1014
Normal
0.4
723
Tumor
0.4
1016
Normal
0.4
913
Tumor
0.4
451
Tumor
0.4
436
Normal
0.4
572
Normal
0.4
616
Normal
0.4
231
Tumor
0.3
912
Normal
0.3
866
Normal
0.3
915
Tumor
0.3
147
Tumor
0.3
742
Normal
0.3
232
Normal
0.3
698
Normal
0.3
738
Normal
0.3
573
Tumor
0.3
1026
Normal
0.3
568
Normal
0.3
648
Normal
0.3
696
Normal
0.3
926
Normal
0.3
111
Normal
0.3
534
Normal
0.3
286
Normal
0.3
714
Normal
0.3
462
Normal
0.3
554
Normal
0.3
636
Normal
0.3
697
Tumor
0.3
864
Normal
0.3
1046
Normal
0.3
482
Normal
0.3
142
Normal
0.3
615
Tumor
0.3
1025
Tumor
0.3
1015
Tumor
0.3
484
Normal
0.3
222
Normal
0.3
882
Normal
0.3
722
Normal
0.3
356
Normal
0.3
528
Normal
0.3
664
Normal
0.3
868
Normal
0.3
481
Tumor
0.3
526
Normal
0.3
514
Normal
0.3
786
Normal
0.3
858
Normal
0.3
132
Normal
0.3
642
Normal
0.3
1022
Normal
0.3
824
Normal
0.3
518
Normal
0.3
365
Tumor
0.3
1027
Tumor
0.2
938
Normal
0.2
228
Normal
0.2
488
Normal
0.2
523
Tumor
0.2
1044
Normal
0.2
686
Normal
0.2
448
Normal
0.2
474
Normal
0.2
914
Normal
0.2
472
Normal
0.2
964
Normal
0.2
196
Normal
0.2
428
Normal
0.2
1032
Normal
0.2
298
Normal
0.2
564
Normal
0.2
137
Tumor
0.2
285
Tumor
0.2
466
Normal
0.2
446
Normal
0.2
218
Normal
0.2
515
Tumor
0.2
443
Tumor
0.2
546
Normal
0.2
922
Normal
0.2
978
Normal
0.2
924
Normal
0.2
981
Tumor
0.2
982
Normal
0.2
878
Normal
0.2
918
Normal
0.2
328
Normal
0.2
923
Tumor
0.2
258
Normal
0.2
816
Normal
0.2
494
Normal
0.2
525
Tumor
0.2
123
Tumor
0.2
412
Normal
0.2
574
Normal
0.2
136
Normal
0.2
392
Normal
0.2
426
Normal
0.2
128
Normal
0.2
778
Normal
0.2
195
Tumor
0.2
944
Normal
0.2
422
Normal
0.2
558
Normal
0.2
358
Normal
0.1
818
Normal
0.1
414
Normal
0.1
956
Normal
0.1
456
Normal
0.1
217
Tumor
0.1
744
Normal
0.1
817
Tumor
0.1
1013
Tumor
0.1
396
Normal
0.1
861
Tumor
0.1
148
Normal
0.1
342
Normal
0.1
424
Normal
0.1
968
Normal
0.1
1043
Tumor
0.1
435
Tumor
0.1
952
Normal
0.1
314
Normal
0.1
387
Tumor
0.1
332
Normal
0.1
464
Normal
0.1
618
Normal
0.1
421
Tumor
0.1
432
Normal
0.1
114
Normal
0.1
567
Tumor
0.1
628
Normal
0.1
716
Normal
0.1
162
Normal
0.1
662
Normal
0.1
1042
Normal
0.1
884
Normal
0.1
364
Normal
0.1
737
Tumor
0.1
672
Normal
0.1
214
Normal
0.1
487
Tumor
0.1
666
Normal
0.1
368
Normal
0.1
713
Tumor
0.1
186
Normal
0.1
966
Normal
0.1
756
Normal
0.1
362
Normal
0.1
212
Normal
0.1
921
Tumor
0.1
284
Normal
0.1
955
Tumor
0.1
958
Normal
0.1
376
Normal
0.1
161
Tumor
0.1
262
Normal
0.1
352
Normal
0.1
354
Normal
0.0
172
Normal
0.0
431
Tumor
0.0
138
Normal
0.0
113
Tumor
0.0
527
Tumor
0.0
187
Tumor
0.0
984
Normal
0.0
366
Normal
0.0
452
Normal
0.0
721
Tumor
0.0
394
Normal
0.0
524
Normal
0.0
416
Normal
0.0
312
Normal
0.0
977
Tumor
0.0
665
Tumor
0.0
916
Normal
0.0
124
Normal
0.0
517
Tumor
0.0
513
Tumor
0.0
445
Tumor
0.0
874
Normal
0.0
278
Normal
0.0
388
Normal
0.0
976
Normal
0.0
126
Normal
0.0
141
Tumor
0.0
146
Normal
0.0
1028
Normal
0.0
272
Normal
0.0
627
Tumor
0.0
957
Tumor
0.0
951
Tumor
0.0
852
Normal
0.0
391
Tumor
0.0
617
Tumor
0.0
498
Normal
0.0
465
Tumor
0.0
135
Tumor
0.0
131
Tumor
0.0
533
Tumor
-0.1
357
Tumor
-0.1
468
Normal
-0.1
433
Tumor
-0.1
483
Tumor
-0.1
125
Tumor
-0.1
386
Normal
-0.1
423
Tumor
-0.1
724
Normal
-0.1
954
Normal
-0.1
145
Tumor
-0.1
478
Normal
-0.1
434
Normal
-0.1
361
Tumor
-0.1
536
Normal
-0.1
355
Tumor
-0.1
393
Tumor
-0.1
727
Tumor
-0.1
777
Tumor
-0.1
375
Tumor
-0.1
331
Tumor
-0.1
785
Tumor
-0.1
937
Tumor
-0.1
384
Normal
-0.1
277
Tumor
-0.1
224
Normal
-0.1
257
Tumor
-0.1
755
Tumor
-0.1
695
Tumor
-0.1
415
Tumor
-0.1
685
Tumor
-0.2
344
Normal
-0.2
963
Tumor
-0.2
563
Tumor
-0.2
516
Normal
-0.2
461
Tumor
-0.2
211
Tumor
-0.2
271
Tumor
-0.2
965
Tumor
-0.2
1041
Tumor
-0.2
467
Tumor
-0.2
865
Tumor
-0.2
463
Tumor
-0.2
413
Tumor
-0.2
881
Tumor
-0.2
188
Normal
-0.2
367
Tumor
-0.2
492
Normal
-0.2
538
Normal
-0.2
221
Tumor
-0.2
268
Normal
-0.2
477
Tumor
-0.2
427
Tumor
-0.2
635
Tumor
-0.2
943
Tumor
-0.2
743
Tumor
-0.2
127
Tumor
-0.2
925
Tumor
-0.3
444
Normal
-0.3
351
Tumor
-0.3
497
Tumor
-0.3
661
Tumor
-0.3
571
Tumor
-0.3
455
Tumor
-0.3
557
Tumor
-0.3
983
Tumor
-0.3
191
Tumor
-0.3
283
Tumor
-0.3
395
Tumor
-0.3
261
Tumor
-0.3
227
Tumor
-0.3
425
Tumor
-0.3
823
Tumor
-0.3
192
Normal
-0.3
813
Tumor
-0.4
297
Tumor
-0.4
383
Tumor
-0.4
411
Tumor
-0.4
857
Tumor
-0.4
223
Tumor
-0.4
953
Tumor
-0.4
967
Tumor
-0.4
535
Tumor
-0.4
185
Tumor
-0.4
663
Tumor
-0.4
545
Tumor
-0.4
877
Tumor
-0.4
267
Tumor
-0.4
447
Tumor
-0.4
311
Tumor
-0.4
883
Tumor
-0.4
715
Tumor
-0.5
641
Tumor
-0.5
471
Tumor
-0.5
491
Tumor
-0.5
553
Tumor
-0.5
363
Tumor
-0.5
213
Tumor
-0.5
493
Tumor
-0.5
815
Tumor
-0.5
1031
Tumor
-0.5
1045
Tumor
-0.6
917
Tumor
-0.6
814
Normal
-0.6
975
Tumor
-0.6
385
Tumor
-0.7
671
Tumor
-0.7
112
Tumor
-0.7
343
Tumor
-0.8
873
Tumor
-0.8
313
Tumor
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.