We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ANXA2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
322.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2174.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
1677.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
1666.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
1651.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1425.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1385.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
1319.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1310.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1043.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
1034.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
1031.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
1024.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
1010.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
1010.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
941.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
936.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
919.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
918.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
916.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
914.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
878.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
849.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
847.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
845.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
805.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
804.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
795.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
762.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
749.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
741.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
730.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
729.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
726.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
722.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
721.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
720.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
717.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
695.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
675.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
628.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
624.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
567.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
566.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
559.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
549.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
548.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
548.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
546.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
545.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
537.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
525.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
524.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
523.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
522.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
511.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
502.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
497.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
493.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
483.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
481.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
481.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
480.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
476.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
466.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
465.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
465.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
464.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
455.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
452.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
451.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
439.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
433.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
430.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
428.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
428.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
425.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
422.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
417.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
414.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
413.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
410.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
410.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
409.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
408.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
403.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
400.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
399.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
397.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
397.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
397.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
396.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
394.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
393.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
389.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
388.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
387.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
387.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
384.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
380.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
380.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
379.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
376.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
375.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
370.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
354.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
353.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
352.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
351.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
347.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
339.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
337.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
337.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
334.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
334.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
333.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
330.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
325.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
324.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
322.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
322.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
320.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
319.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
319.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
317.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
315.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
315.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
315.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
315.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
315.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
311.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
307.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
306.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
304.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
303.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
302.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
301.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
299.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
298.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
294.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
289.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
289.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
287.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
286.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
278.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
277.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
273.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
272.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
272.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
271.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
271.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
271.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
269.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
269.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
268.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
267.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
265.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
265.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
264.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
263.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
263.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
259.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
259.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
256.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
256.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
256.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
255.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
254.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
251.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
248.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
248.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
247.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
247.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
245.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
245.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
244.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
240.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
240.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
239.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
238.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
238.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
238.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
237.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
236.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
233.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
232.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
231.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
230.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
229.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
227.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
227.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
225.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
225.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
224.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
224.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
223.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
223.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
222.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
222.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
218.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
218.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
218.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
217.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
216.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
216.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
215.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
215.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
213.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
211.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
209.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
209.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
208.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
207.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
207.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
203.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
201.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
197.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
197.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
195.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
194.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
194.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
192.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
192.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
192.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
190.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
189.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
186.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
184.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
184.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
182.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
182.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
179.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
178.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
177.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
177.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
176.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
176.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
176.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
176.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
175.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
175.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
175.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
175.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
174.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
174.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
173.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
172.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
170.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
170.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
170.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
170.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
169.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
169.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
168.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
168.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
168.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
167.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
165.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
164.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
161.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
160.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
160.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
159.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
159.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
158.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
155.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
155.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
153.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
153.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
153.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
152.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
151.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
151.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
149.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
148.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
147.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
147.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
144.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
144.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
143.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
143.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
142.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
139.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
138.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
138.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
134.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
134.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
133.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
132.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
132.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
129.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
128.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
127.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
126.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
124.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
121.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
121.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
121.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
118.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
117.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
116.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
116.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
115.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
113.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
111.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
111.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
110.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
110.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
109.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
109.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
109.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
103.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
102.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
102.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
101.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
101.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
100.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
98.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
95.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
94.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
94.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
93.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
93.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
89.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
87.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
87.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
87.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
87.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
86.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
86.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
86.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
85.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
85.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
82.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
81.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
81.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
81.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
79.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
76.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
74.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
74.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
70.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
70.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
68.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
66.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
65.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
64.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
63.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
62.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
61.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
61.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
60.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
59.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
57.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
56.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
51.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
50.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
47.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
46.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
46.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
35.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
27.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ANXA2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
268.5
Number of samples
231
Samples
Sample
Description
TPM
DO45307
0 years, female, NA, stage:4, dead, 240 days
2108.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
1989.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
1455.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
1352.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1311.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
1286.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
1280.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
1188.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
1082.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
1036.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
796.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
783.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
756.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
726.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
635.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
612.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
611.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
600.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
599.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
590.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
552.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
550.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
542.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
528.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
521.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
507.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
487.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
478.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
469.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
466.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
460.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
449.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
440.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
439.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
437.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
432.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
423.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
405.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
405.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
398.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
394.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
389.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
389.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
388.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
376.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
373.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
371.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
369.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
367.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
364.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
352.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
351.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
350.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
345.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
341.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
339.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
338.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
337.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
334.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
325.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
325.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
324.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
318.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
309.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
308.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
305.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
299.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
297.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
297.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
293.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
279.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
277.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
277.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
270.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
267.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
265.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
260.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
259.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
258.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
256.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
249.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
249.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
248.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
242.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
237.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
234.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
233.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
230.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
230.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
228.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
225.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
223.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
222.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
222.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
222.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
220.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
217.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
215.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
214.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
210.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
209.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
203.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
200.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
197.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
196.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
193.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
192.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
189.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
188.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
188.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
187.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
187.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
183.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
183.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
182.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
182.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
182.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
181.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
181.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
177.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
176.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
176.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
174.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
171.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
171.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
170.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
164.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
162.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
159.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
158.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
156.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
155.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
153.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
152.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
150.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
148.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
145.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
145.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
143.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
143.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
143.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
143.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
142.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
141.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
140.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
140.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
139.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
138.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
137.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
136.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
133.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
130.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
130.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
129.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
123.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
123.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
123.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
121.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
120.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
119.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
119.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
113.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
112.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
112.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
109.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
107.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
105.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
104.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
100.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
98.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
98.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
97.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
97.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
96.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
95.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
95.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
93.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
89.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
89.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
89.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
89.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
87.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
86.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
85.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
85.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
84.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
83.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
82.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
76.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
74.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
74.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
74.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
73.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
71.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
69.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
67.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
67.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
67.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
64.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
63.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
61.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
59.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
59.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
59.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
54.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
51.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
51.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
49.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
46.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
46.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
41.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
39.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
38.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
36.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
35.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
35.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
33.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
30.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
30.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
27.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
26.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
25.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
22.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
21.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
21.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
20.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
18.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
18.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
17.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
15.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
14.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
311
Tumor
1.6
135
Tumor
1.3
925
Tumor
1.3
421
Tumor
1.2
533
Tumor
1.1
455
Tumor
1.1
387
Tumor
1.0
617
Tumor
0.9
477
Tumor
0.9
685
Tumor
0.9
917
Tumor
0.9
1021
Tumor
0.9
881
Tumor
0.9
185
Tumor
0.9
911
Tumor
0.9
375
Tumor
0.8
283
Tumor
0.8
427
Tumor
0.8
563
Tumor
0.8
445
Tumor
0.7
271
Tumor
0.7
413
Tumor
0.7
913
Tumor
0.7
443
Tumor
0.7
137
Tumor
0.7
112
Tumor
0.7
223
Tumor
0.7
916
Normal
0.7
131
Tumor
0.7
883
Tumor
0.6
635
Tumor
0.6
813
Tumor
0.6
483
Tumor
0.6
737
Tumor
0.6
444
Normal
0.6
192
Normal
0.6
851
Tumor
0.6
1041
Tumor
0.6
471
Tumor
0.6
461
Tumor
0.6
525
Tumor
0.6
297
Tumor
0.6
953
Tumor
0.6
357
Tumor
0.6
535
Tumor
0.5
527
Tumor
0.5
513
Tumor
0.5
187
Tumor
0.5
423
Tumor
0.5
715
Tumor
0.5
557
Tumor
0.5
191
Tumor
0.5
478
Normal
0.5
492
Normal
0.5
113
Tumor
0.5
975
Tumor
0.5
268
Normal
0.5
383
Tumor
0.4
741
Tumor
0.4
433
Tumor
0.4
231
Tumor
0.4
536
Normal
0.4
395
Tumor
0.4
921
Tumor
0.4
213
Tumor
0.4
127
Tumor
0.4
355
Tumor
0.4
447
Tumor
0.4
341
Tumor
0.4
867
Tumor
0.4
817
Tumor
0.4
814
Normal
0.4
641
Tumor
0.4
267
Tumor
0.3
963
Tumor
0.3
857
Tumor
0.3
465
Tumor
0.3
665
Tumor
0.3
538
Normal
0.3
451
Tumor
0.3
567
Tumor
0.3
923
Tumor
0.3
1013
Tumor
0.3
161
Tumor
0.3
188
Normal
0.3
277
Tumor
0.3
363
Tumor
0.3
823
Tumor
0.3
365
Tumor
0.3
385
Tumor
0.3
435
Tumor
0.3
415
Tumor
0.2
493
Tumor
0.2
545
Tumor
0.2
1031
Tumor
0.2
863
Tumor
0.2
1028
Normal
0.2
873
Tumor
0.2
331
Tumor
0.2
1027
Tumor
0.2
361
Tumor
0.2
145
Tumor
0.2
1015
Tumor
0.2
537
Tumor
0.2
391
Tumor
0.2
745
Tumor
0.2
498
Normal
0.2
1045
Tumor
0.1
958
Normal
0.1
257
Tumor
0.1
386
Normal
0.1
977
Tumor
0.1
852
Normal
0.1
195
Tumor
0.1
312
Normal
0.1
434
Normal
0.1
943
Tumor
0.1
146
Normal
0.1
384
Normal
0.1
147
Tumor
0.1
224
Normal
0.1
141
Tumor
0.1
491
Tumor
0.1
125
Tumor
0.1
524
Normal
0.1
983
Tumor
0.1
1043
Tumor
0.0
327
Tumor
0.0
126
Normal
0.0
815
Tumor
0.0
284
Normal
0.0
661
Tumor
0.0
516
Normal
0.0
515
Tumor
0.0
573
Tumor
0.0
467
Tumor
0.0
353
Tumor
0.0
367
Tumor
0.0
868
Normal
0.0
553
Tumor
0.0
138
Normal
0.0
1032
Normal
0.0
671
Tumor
0.0
713
Tumor
0.0
211
Tumor
0.0
214
Normal
0.0
343
Tumor
-0.1
262
Normal
-0.1
431
Tumor
-0.1
463
Tumor
-0.1
721
Tumor
-0.1
915
Tumor
-0.1
136
Normal
-0.1
956
Normal
-0.1
124
Normal
-0.1
558
Normal
-0.1
473
Tumor
-0.1
313
Tumor
-0.1
874
Normal
-0.1
517
Tumor
-0.1
924
Normal
-0.1
362
Normal
-0.1
474
Normal
-0.1
422
Normal
-0.1
976
Normal
-0.2
627
Tumor
-0.2
574
Normal
-0.2
1042
Normal
-0.2
272
Normal
-0.2
354
Normal
-0.2
861
Tumor
-0.2
228
Normal
-0.2
1044
Normal
-0.2
392
Normal
-0.2
785
Tumor
-0.2
1025
Tumor
-0.2
278
Normal
-0.2
697
Tumor
-0.2
212
Normal
-0.2
878
Normal
-0.2
647
Tumor
-0.3
816
Normal
-0.3
966
Normal
-0.3
416
Normal
-0.3
954
Normal
-0.3
217
Tumor
-0.3
171
Tumor
-0.3
388
Normal
-0.3
968
Normal
-0.3
366
Normal
-0.3
642
Normal
-0.3
918
Normal
-0.3
672
Normal
-0.3
424
Normal
-0.3
528
Normal
-0.3
344
Normal
-0.3
172
Normal
-0.3
695
Tumor
-0.4
394
Normal
-0.4
724
Normal
-0.4
468
Normal
-0.4
984
Normal
-0.4
952
Normal
-0.4
716
Normal
-0.4
472
Normal
-0.4
285
Tumor
-0.4
494
Normal
-0.4
425
Tumor
-0.4
1022
Normal
-0.4
368
Normal
-0.4
564
Normal
-0.4
132
Normal
-0.4
978
Normal
-0.4
615
Tumor
-0.4
728
Normal
-0.4
328
Normal
-0.4
497
Tumor
-0.4
778
Normal
-0.4
364
Normal
-0.4
396
Normal
-0.4
452
Normal
-0.4
662
Normal
-0.4
428
Normal
-0.4
456
Normal
-0.4
722
Normal
-0.4
884
Normal
-0.4
466
Normal
-0.4
546
Normal
-0.4
914
Normal
-0.5
744
Normal
-0.5
352
Normal
-0.5
957
Tumor
-0.5
686
Normal
-0.5
186
Normal
-0.5
332
Normal
-0.5
114
Normal
-0.5
554
Normal
-0.5
864
Normal
-0.5
514
Normal
-0.5
414
Normal
-0.5
432
Normal
-0.5
426
Normal
-0.5
464
Normal
-0.5
448
Normal
-0.5
314
Normal
-0.5
746
Normal
-0.5
376
Normal
-0.5
616
Normal
-0.5
922
Normal
-0.5
534
Normal
-0.5
926
Normal
-0.5
142
Normal
-0.5
663
Tumor
-0.5
738
Normal
-0.5
446
Normal
-0.5
618
Normal
-0.5
777
Tumor
-0.5
232
Normal
-0.6
628
Normal
-0.6
221
Tumor
-0.6
572
Normal
-0.6
755
Tumor
-0.6
148
Normal
-0.6
412
Normal
-0.6
218
Normal
-0.6
488
Normal
-0.6
882
Normal
-0.6
982
Normal
-0.6
636
Normal
-0.6
196
Normal
-0.6
1026
Normal
-0.6
664
Normal
-0.6
696
Normal
-0.6
298
Normal
-0.6
666
Normal
-0.6
128
Normal
-0.6
162
Normal
-0.6
965
Tumor
-0.6
487
Tumor
-0.6
938
Normal
-0.6
261
Tumor
-0.7
526
Normal
-0.7
571
Tumor
-0.7
818
Normal
-0.7
951
Tumor
-0.7
866
Normal
-0.7
462
Normal
-0.7
123
Tumor
-0.7
393
Tumor
-0.7
714
Normal
-0.7
912
Normal
-0.7
111
Normal
-0.7
1014
Normal
-0.7
436
Normal
-0.7
756
Normal
-0.7
258
Normal
-0.7
944
Normal
-0.7
342
Normal
-0.7
955
Tumor
-0.7
358
Normal
-0.8
482
Normal
-0.8
723
Tumor
-0.8
286
Normal
-0.8
743
Tumor
-0.8
786
Normal
-0.8
824
Normal
-0.8
356
Normal
-0.8
568
Normal
-0.8
222
Normal
-0.8
937
Tumor
-0.8
967
Tumor
-0.8
411
Tumor
-0.9
1016
Normal
-0.9
1046
Normal
-0.9
648
Normal
-0.9
518
Normal
-0.9
698
Normal
-0.9
481
Tumor
-0.9
227
Tumor
-0.9
862
Normal
-0.9
964
Normal
-0.9
484
Normal
-0.9
523
Tumor
-0.9
858
Normal
-1.0
351
Tumor
-1.0
742
Normal
-1.0
877
Tumor
-1.1
865
Tumor
-1.1
727
Tumor
-1.1
981
Tumor
-1.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.