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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC3 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
53.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
42.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
38.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
34.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
33.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
31.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
26.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
26.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
25.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
24.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
22.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
22.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
22.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
22.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
21.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
20.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
20.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
20.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
20.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
19.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
19.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
19.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
18.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
18.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
18.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
18.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
18.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
18.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
17.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
17.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
16.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
16.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
16.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
16.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
15.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
15.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
15.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
15.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
15.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
14.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
14.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
14.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
14.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
14.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
14.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
14.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
14.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
14.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
14.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
13.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
13.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
13.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
13.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
13.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
12.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
12.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
12.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
12.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
12.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
12.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
12.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
12.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
11.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
11.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
11.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
11.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
11.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
11.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
11.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
11.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
11.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
11.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
11.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
11.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
11.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
10.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
10.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
10.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
10.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
10.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
10.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
10.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
10.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
10.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
10.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
10.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
10.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
10.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
9.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
9.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
9.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
9.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
9.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
9.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
9.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
9.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
9.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
9.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
9.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
9.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
9.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
9.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
9.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
9.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
9.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
8.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
8.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
8.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
8.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
8.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
8.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
8.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
8.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
8.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
8.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
8.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
7.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
7.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
7.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
7.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
7.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
7.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
7.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
7.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
7.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
7.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
7.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
7.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
7.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
7.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
7.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
7.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
7.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
7.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
6.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
6.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
6.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
6.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
6.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
6.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
6.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
6.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
6.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
6.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
6.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
6.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
6.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
6.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
6.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
6.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
6.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
6.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
6.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
6.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
6.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
6.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
6.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
5.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
5.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
5.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
5.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
5.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
5.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
4.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
4.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
4.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
4.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
4.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
4.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
4.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
4.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
4.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
4.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
3.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
3.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
3.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
3.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
3.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
3.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
3.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
3.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
3.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
3.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
3.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
3.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
3.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
3.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
3.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
3.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
3.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
3.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
3.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
3.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
2.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
2.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
2.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
2.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
2.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
2.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
2.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
2.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
2.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
2.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
2.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
2.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
2.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
2.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
2.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
2.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
2.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
1.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
1.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
1.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
1.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
1.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
1.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
1.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
0.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
0.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
0.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
0.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
0.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
0.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
0.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
0.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
0.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
0.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
0.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
0.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
0.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
0.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
0.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
0.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
0.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
0.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
0.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
0.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
0.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
0.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
0.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
0.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
0.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
0.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
0.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
0.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
0.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
0.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
0.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
0.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
0.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
0.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
0.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
0.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
0.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
0.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
0.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
0.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
0.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
0.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
0.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
0.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
0.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
0.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
0.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
0.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
0.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
0.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
0.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.0
Number of samples
231
Samples
Sample
Description
TPM
DO45189
0 years, female, NA, stage:2, alive, 1200 days
73.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
58.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
51.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
50.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
47.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
47.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
46.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
45.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
45.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
43.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
41.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
41.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
40.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
38.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
37.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
36.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
35.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
33.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
33.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
33.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
33.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
33.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
32.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
32.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
31.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
30.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
29.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
28.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
28.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
28.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
28.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
26.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
26.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
26.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
26.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
25.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
25.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
25.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
25.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
25.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
24.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
24.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
24.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
24.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
24.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
24.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
24.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
24.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
23.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
23.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
23.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
23.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
22.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
22.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
22.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
21.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
21.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
21.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
21.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
21.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
21.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
21.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
21.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
21.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
21.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
21.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
20.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
20.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
20.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
20.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
20.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
20.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
20.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
20.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
20.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
20.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
20.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
20.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
20.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
19.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
19.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
19.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
19.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
19.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
19.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
19.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
19.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
19.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
18.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
18.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
18.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
18.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
18.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
18.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
18.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
18.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
18.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
18.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
18.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
18.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
17.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
17.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
17.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
17.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
17.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
17.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
17.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
17.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
17.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
17.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
17.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
17.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
17.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
17.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
16.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
16.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
16.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
16.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
16.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
16.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
16.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
16.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
16.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
15.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
15.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
15.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
15.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
15.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
15.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
15.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
15.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
15.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
15.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
15.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
15.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
15.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
15.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
15.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
15.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
15.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
15.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
15.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
15.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
15.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
14.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
14.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
14.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
14.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
14.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
14.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
14.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
14.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
14.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
14.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
14.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
14.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
14.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
13.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
13.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
13.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
13.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
13.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
13.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
13.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
12.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
12.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
12.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
12.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
12.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
12.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
12.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
12.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
12.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
12.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
12.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
12.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
12.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
12.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
11.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
11.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
11.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
11.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
11.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
11.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
11.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
11.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
11.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
11.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
11.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
11.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
11.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
11.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
11.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
10.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
10.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
10.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
10.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
10.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
10.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
10.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
10.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
10.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
9.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
9.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
9.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
9.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
9.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
9.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
9.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
8.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
8.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
8.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
8.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
8.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
8.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
8.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
8.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
8.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
7.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
7.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
7.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
7.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
7.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
6.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
366
Normal
2.0
463
Tumor
1.9
368
Normal
1.9
567
Tumor
1.7
343
Tumor
1.7
376
Normal
1.7
557
Tumor
1.7
393
Tumor
1.6
227
Tumor
1.6
446
Normal
1.5
445
Tumor
1.5
361
Tumor
1.5
271
Tumor
1.4
125
Tumor
1.4
375
Tumor
1.4
451
Tumor
1.3
362
Normal
1.3
436
Normal
1.2
568
Normal
1.2
257
Tumor
1.2
131
Tumor
1.1
443
Tumor
1.1
267
Tumor
1.1
365
Tumor
1.1
367
Tumor
1.1
435
Tumor
1.1
413
Tumor
1.0
231
Tumor
1.0
423
Tumor
1.0
452
Normal
0.9
341
Tumor
0.9
391
Tumor
0.9
342
Normal
0.9
713
Tumor
0.9
384
Normal
0.9
351
Tumor
0.8
426
Normal
0.8
956
Normal
0.8
354
Normal
0.8
221
Tumor
0.8
112
Tumor
0.8
383
Tumor
0.8
671
Tumor
0.8
976
Normal
0.8
635
Tumor
0.8
455
Tumor
0.7
285
Tumor
0.7
161
Tumor
0.7
352
Normal
0.7
172
Normal
0.7
464
Normal
0.7
432
Normal
0.7
456
Normal
0.7
358
Normal
0.7
434
Normal
0.7
465
Tumor
0.7
433
Tumor
0.7
344
Normal
0.6
171
Tumor
0.6
545
Tumor
0.6
188
Normal
0.6
1021
Tumor
0.6
727
Tumor
0.6
743
Tumor
0.6
232
Normal
0.6
357
Tumor
0.5
697
Tumor
0.5
258
Normal
0.5
1043
Tumor
0.5
881
Tumor
0.5
353
Tumor
0.5
498
Normal
0.5
186
Normal
0.5
162
Normal
0.5
641
Tumor
0.5
466
Normal
0.5
468
Normal
0.5
964
Normal
0.5
472
Normal
0.5
185
Tumor
0.5
955
Tumor
0.5
474
Normal
0.5
911
Tumor
0.5
427
Tumor
0.5
573
Tumor
0.5
414
Normal
0.5
147
Tumor
0.5
882
Normal
0.5
148
Normal
0.5
462
Normal
0.5
187
Tumor
0.5
884
Normal
0.5
944
Normal
0.4
883
Tumor
0.4
123
Tumor
0.4
663
Tumor
0.4
394
Normal
0.4
223
Tumor
0.4
966
Normal
0.4
526
Normal
0.4
482
Normal
0.4
111
Normal
0.4
135
Tumor
0.4
878
Normal
0.4
492
Normal
0.4
467
Tumor
0.4
954
Normal
0.4
636
Normal
0.4
877
Tumor
0.3
553
Tumor
0.3
527
Tumor
0.3
431
Tumor
0.3
477
Tumor
0.3
814
Normal
0.3
938
Normal
0.3
481
Tumor
0.3
564
Normal
0.3
483
Tumor
0.3
191
Tumor
0.3
574
Normal
0.3
912
Normal
0.3
914
Normal
0.3
672
Normal
0.3
913
Tumor
0.2
1031
Tumor
0.2
392
Normal
0.2
1025
Tumor
0.2
723
Tumor
0.2
497
Tumor
0.2
756
Normal
0.2
444
Normal
0.2
642
Normal
0.2
478
Normal
0.2
228
Normal
0.2
424
Normal
0.2
268
Normal
0.2
484
Normal
0.2
491
Tumor
0.2
517
Tumor
0.2
386
Normal
0.1
514
Normal
0.1
572
Normal
0.1
494
Normal
0.1
714
Normal
0.1
546
Normal
0.1
571
Tumor
0.1
533
Tumor
0.1
744
Normal
0.1
128
Normal
0.1
728
Normal
0.1
272
Normal
0.1
395
Tumor
0.1
742
Normal
0.1
616
Normal
0.1
127
Tumor
0.1
113
Tumor
0.1
716
Normal
0.1
132
Normal
0.1
142
Normal
0.1
447
Tumor
0.1
648
Normal
0.1
218
Normal
0.1
114
Normal
0.1
952
Normal
0.1
141
Tumor
0.1
422
Normal
0.1
1045
Tumor
0.1
865
Tumor
0.1
615
Tumor
0.1
778
Normal
0.1
487
Tumor
0.0
618
Normal
0.0
428
Normal
0.0
515
Tumor
0.0
665
Tumor
0.0
627
Tumor
0.0
628
Normal
0.0
212
Normal
0.0
943
Tumor
0.0
813
Tumor
0.0
516
Normal
0.0
554
Normal
0.0
696
Normal
0.0
666
Normal
0.0
698
Normal
0.0
262
Normal
0.0
137
Tumor
0.0
488
Normal
0.0
396
Normal
0.0
217
Tumor
0.0
746
Normal
0.0
534
Normal
0.0
951
Tumor
0.0
617
Tumor
0.0
664
Normal
0.0
448
Normal
-0.1
518
Normal
-0.1
286
Normal
-0.1
777
Tumor
-0.1
1041
Tumor
-0.1
224
Normal
-0.1
195
Tumor
-0.1
145
Tumor
-0.1
537
Tumor
-0.1
421
Tumor
-0.1
126
Normal
-0.1
786
Normal
-0.1
1044
Normal
-0.1
493
Tumor
-0.1
863
Tumor
-0.1
136
Normal
-0.1
1046
Normal
-0.1
662
Normal
-0.1
937
Tumor
-0.1
1027
Tumor
-0.1
138
Normal
-0.2
388
Normal
-0.2
425
Tumor
-0.2
461
Tumor
-0.2
538
Normal
-0.2
953
Tumor
-0.2
738
Normal
-0.2
192
Normal
-0.2
695
Tumor
-0.2
471
Tumor
-0.2
558
Normal
-0.2
647
Tumor
-0.2
283
Tumor
-0.2
722
Normal
-0.2
528
Normal
-0.2
196
Normal
-0.2
473
Tumor
-0.2
146
Normal
-0.2
1022
Normal
-0.3
213
Tumor
-0.3
721
Tumor
-0.3
873
Tumor
-0.3
686
Normal
-0.3
261
Tumor
-0.3
785
Tumor
-0.3
222
Normal
-0.3
1032
Normal
-0.3
724
Normal
-0.4
661
Tumor
-0.4
214
Normal
-0.4
867
Tumor
-0.4
525
Tumor
-0.4
1042
Normal
-0.5
513
Tumor
-0.5
868
Normal
-0.5
284
Normal
-0.5
124
Normal
-0.5
536
Normal
-0.5
1026
Normal
-0.6
523
Tumor
-0.6
861
Tumor
-0.6
737
Tumor
-0.6
866
Normal
-0.6
968
Normal
-0.6
862
Normal
-0.7
563
Tumor
-0.7
874
Normal
-0.7
1028
Normal
-0.7
524
Normal
-0.7
387
Tumor
-0.7
745
Tumor
-0.8
741
Tumor
-0.8
755
Tumor
-0.8
864
Normal
-0.8
535
Tumor
-0.9
923
Tumor
-0.9
921
Tumor
-0.9
715
Tumor
-1.0
958
Normal
-1.1
685
Tumor
-1.1
211
Tumor
-1.3
926
Normal
-1.4
963
Tumor
-1.5
922
Normal
-1.5
925
Tumor
-1.7
924
Normal
-1.8
918
Normal
-1.8
385
Tumor
-1.9
965
Tumor
-2.0
915
Tumor
-2.0
916
Normal
-2.0
917
Tumor
-2.1
975
Tumor
-2.4
967
Tumor
-2.9
957
Tumor
-3.3
355
Tumor
N/A
356
Normal
N/A
363
Tumor
N/A
364
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
817
Tumor
N/A
818
Normal
N/A
823
Tumor
N/A
824
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
1013
Tumor
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
977
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
858
Normal
N/A
981
Tumor
N/A
982
Normal
N/A
983
Tumor
N/A
984
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
415
Tumor
N/A
416
Normal
N/A
311
Tumor
N/A
312
Normal
N/A
313
Tumor
N/A
314
Normal
N/A
327
Tumor
N/A
328
Normal
N/A
331
Tumor
N/A
332
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
