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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
28.2
nTPM
HPA Brain:
43.7
nTPM
GTEx:
28.2
nTPM
FANTOM5:
60.6
Scaled Tags Per Million
Pig:
18.2
nTPM
Mouse:
46.3
nTPM
Allen mouse:
7.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
43.7
Sample id
Sample description
nTPM
Amygdala nTPM: 39.3
2695
Female, age 67, right hemisphere
53.2
1987
Female, age 91, left hemisphere
42.2
2814
Male, age 76, right hemisphere
37.8
2517
Female, age 94, left hemisphere
34.8
2514
Male, age 75, right hemisphere
28.6
Basal amygdala nTPM: 37.2
2243
Female, age 91, right hemisphere
43.1
2609
Male, age 75, right hemisphere
42.9
2110
Male, age 80, left hemisphere
39.4
1955
Male, age 76, both hemispheres
38.4
2827
Female, age 67, right hemisphere
30.6
2685
Female, age 94, left hemisphere
29.0
Central amygdala nTPM: 43.7
2515
Male, age 75, right hemisphere
61.1
2239
Male, age 80, left hemisphere
41.7
1905
Male, age 76, both hemispheres
40.6
2701
Female, age 91, right hemisphere
38.4
2826
Female, age 94, left hemisphere
36.7
Corticomedial amygdala nTPM: 34.2
2829
Male, age 80, left hemisphere
39.2
2428
Male, age 75, right hemisphere
38.2
2240
Male, age 76, both hemispheres
34.9
2242
Female, age 91, right hemisphere
32.8
2429
Female, age 94, left hemisphere
31.2
2535
Female, age 67, right hemisphere
29.2
Lateral amygdala nTPM: 37.4
2256
Male, age 80, left hemisphere
44.1
2255
Female, age 91, right hemisphere
42.6
2830
Female, age 67, right hemisphere
40.2
2516
Male, age 75, right hemisphere
35.1
1883
Male, age 76, both hemispheres
34.6
2534
Female, age 94, left hemisphere
28.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
28.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 28.2
Samples: 152
Max nTPM: 151.9
Min nTPM: 9.0
Std nTPM: 18.9
Median nTPM: 22.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
151.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
118.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
103.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
76.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
69.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
69.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
68.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
59.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
56.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
54.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
53.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
52.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
50.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
49.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
46.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
45.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
43.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
42.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
42.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
42.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
41.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
39.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
39.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
38.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
38.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
38.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
38.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
37.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
37.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
36.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
36.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
36.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
36.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
36.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
34.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
34.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
34.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
32.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
32.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
32.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
31.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
31.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
30.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
30.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
30.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
29.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
29.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
29.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
29.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
28.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
28.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
28.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
27.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
27.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
27.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
27.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
27.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
26.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
26.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
26.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
26.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
26.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
25.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
25.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
25.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
24.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
24.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
24.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
23.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
23.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
23.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
23.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
23.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
23.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
22.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
22.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
22.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
22.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
22.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
22.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
22.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
22.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
22.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
22.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
21.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
21.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
21.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
21.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
21.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
21.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
21.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
21.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
21.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
21.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
20.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
20.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
20.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
20.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
20.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
20.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
20.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
19.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
19.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
19.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
18.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
18.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
18.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
18.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
18.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
18.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
17.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
17.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
17.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
17.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
17.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
17.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
17.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
16.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
16.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
16.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
16.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
16.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
16.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
16.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
16.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
15.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
15.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
15.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
15.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
15.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
14.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
14.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
14.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
13.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
13.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
13.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
13.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
13.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
13.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
12.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
12.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
12.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
12.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
12.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
11.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
11.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
11.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
11.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
11.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
11.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
9.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
9.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
46.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 46.3
Samples: 4
Max nTPM: 51.9
Min nTPM: 42.8
Sample A
Male
42.8
Sample B
Male
51.9
Sample C
Female
42.8
Sample D
Female
47.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.