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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FES is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
79.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
75.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
68.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
56.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
52.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
51.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
49.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
48.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
48.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
46.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
46.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
43.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
39.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
38.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
38.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
37.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
37.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
36.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
36.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
35.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
34.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
34.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
33.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
31.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
31.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
31.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
30.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
30.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
30.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
29.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
29.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
29.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
28.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
27.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
26.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
26.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
26.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
25.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
25.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
24.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
24.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
24.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
24.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
24.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
23.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
23.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
23.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
23.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
22.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
22.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
22.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
22.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
22.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
21.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
21.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
21.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
21.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
20.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
20.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
20.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
19.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
19.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
18.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
18.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
18.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
17.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
17.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
17.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
17.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
17.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
17.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
17.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
17.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
17.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
16.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
16.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
16.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
16.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
16.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
16.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
16.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
16.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
16.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
16.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
16.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
15.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
15.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
15.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
15.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
15.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
14.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
14.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
14.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
14.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
14.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
14.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
14.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
14.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
14.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
13.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
13.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
13.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
13.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
13.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
13.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
13.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
13.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
12.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
12.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
12.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
12.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
12.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
12.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
12.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
12.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
11.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
11.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
11.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
11.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
11.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
11.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
11.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
11.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
11.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
11.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
11.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
10.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
10.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
10.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
10.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
10.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
10.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
10.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
9.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
9.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
9.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
9.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
9.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
9.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
9.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
9.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
9.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
9.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
8.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
8.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
8.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
8.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
8.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
8.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
8.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
8.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
8.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
8.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
8.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
8.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
7.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
7.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
7.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
7.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
7.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
7.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
7.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
7.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
7.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
7.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
7.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
7.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
7.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
7.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
6.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
6.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
6.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
6.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
6.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
6.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
6.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
6.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
6.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
6.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
6.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
6.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
6.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
6.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
6.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
6.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
6.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
6.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
5.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
5.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
5.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
5.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
5.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
5.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
5.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
5.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
5.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
4.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
4.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
4.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
4.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
4.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
4.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
4.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
4.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
4.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
4.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
4.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
3.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
3.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
3.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
3.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
3.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
3.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
3.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
3.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
3.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
3.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
3.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
3.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
3.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
3.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
3.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
3.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
3.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
2.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
2.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
2.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
2.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
2.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
2.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
2.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
2.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
2.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
2.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
2.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
2.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
2.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
2.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
2.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
2.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
2.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
2.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
2.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
2.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
2.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
2.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
2.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
2.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
2.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
2.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
2.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
2.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
2.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
2.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
2.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
2.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
2.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
2.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
2.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
1.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
1.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
1.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
1.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
1.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
1.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
1.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
1.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
1.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
1.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
1.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
1.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
1.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
1.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
1.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
1.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
1.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
1.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
0.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
0.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
0.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FES is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.4
Number of samples
231
Samples
Sample
Description
TPM
DO45096
0 years, male, NA, stage:2, dead, 1290 days
70.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
46.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
44.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
40.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
38.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
37.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
37.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
34.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
34.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
32.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
31.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
31.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
31.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
31.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
29.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
29.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
28.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
28.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
28.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
27.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
26.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
24.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
22.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
22.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
21.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
21.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
20.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
19.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
19.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
19.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
18.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
18.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
18.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
18.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
18.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
17.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
16.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
16.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
16.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
15.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
15.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
15.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
15.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
14.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
14.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
14.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
14.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
14.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
13.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
13.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
13.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
13.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
13.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
13.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
13.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
13.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
13.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
12.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
12.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
12.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
12.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
12.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
12.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
11.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
11.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
11.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
11.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
11.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
11.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
11.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
11.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
11.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
9.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
9.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
9.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
9.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
9.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
9.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
9.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
9.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
9.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
9.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
8.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
8.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
8.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
8.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
8.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
7.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
7.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
7.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
7.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
7.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
6.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
6.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
6.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
6.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
6.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
6.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
6.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
6.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
6.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
6.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
6.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
6.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
6.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
6.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
6.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
5.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
5.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
5.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
5.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
5.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
5.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
5.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
5.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
5.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
5.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
5.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
5.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
5.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
5.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
5.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
5.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
5.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
4.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
4.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
4.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
4.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
4.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
4.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
4.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
4.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
4.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
4.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
4.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
4.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
4.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
4.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
3.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
3.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
3.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
3.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
3.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
3.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
3.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
3.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
3.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
3.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
3.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
3.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
3.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
3.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
3.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
3.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
3.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
3.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
2.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
2.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
2.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
2.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
2.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
2.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
2.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
2.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
2.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
2.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
2.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
2.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
2.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
2.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
2.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
2.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
2.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
2.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
2.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
2.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
2.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
2.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
2.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
2.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
2.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
2.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
2.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
1.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
1.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
1.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
1.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
1.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
1.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
1.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
1.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
1.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
1.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
1.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
1.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
1.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
1.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
1.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
1.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
1.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
0.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
0.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
0.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
0.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
0.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
0.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
0.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
0.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
0.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
0.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
0.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
0.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
0.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
0.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
0.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
357
Tumor
1.8
443
Tumor
1.2
533
Tumor
1.0
635
Tumor
0.9
445
Tumor
0.8
778
Normal
0.8
952
Normal
0.7
777
Tumor
0.7
477
Tumor
0.7
954
Normal
0.6
921
Tumor
0.6
926
Normal
0.6
271
Tumor
0.6
536
Normal
0.6
124
Normal
0.6
421
Tumor
0.6
746
Normal
0.6
146
Normal
0.6
528
Normal
0.6
162
Normal
0.6
1026
Normal
0.6
1014
Normal
0.6
1031
Tumor
0.5
554
Normal
0.5
1016
Normal
0.5
277
Tumor
0.5
444
Normal
0.5
218
Normal
0.5
728
Normal
0.5
195
Tumor
0.5
478
Normal
0.5
456
Normal
0.5
713
Tumor
0.5
1046
Normal
0.5
392
Normal
0.5
524
Normal
0.4
553
Tumor
0.4
436
Normal
0.4
461
Tumor
0.4
358
Normal
0.4
722
Normal
0.4
298
Normal
0.4
984
Normal
0.4
966
Normal
0.4
1022
Normal
0.4
858
Normal
0.4
862
Normal
0.4
727
Tumor
0.4
738
Normal
0.4
286
Normal
0.4
492
Normal
0.4
224
Normal
0.4
394
Normal
0.4
384
Normal
0.4
426
Normal
0.4
636
Normal
0.4
342
Normal
0.4
268
Normal
0.4
484
Normal
0.4
737
Tumor
0.4
344
Normal
0.4
744
Normal
0.4
434
Normal
0.4
128
Normal
0.4
214
Normal
0.4
114
Normal
0.4
627
Tumor
0.4
488
Normal
0.3
498
Normal
0.3
1045
Tumor
0.3
341
Tumor
0.3
472
Normal
0.3
937
Tumor
0.3
132
Normal
0.3
136
Normal
0.3
352
Normal
0.3
518
Normal
0.3
714
Normal
0.3
558
Normal
0.3
723
Tumor
0.3
698
Normal
0.3
332
Normal
0.3
538
Normal
0.3
433
Tumor
0.3
471
Tumor
0.3
951
Tumor
0.3
918
Normal
0.3
878
Normal
0.3
672
Normal
0.3
882
Normal
0.3
414
Normal
0.3
863
Tumor
0.3
172
Normal
0.3
424
Normal
0.3
664
Normal
0.3
111
Normal
0.3
1032
Normal
0.3
468
Normal
0.3
428
Normal
0.3
923
Tumor
0.3
186
Normal
0.2
983
Tumor
0.2
968
Normal
0.2
938
Normal
0.2
912
Normal
0.2
222
Normal
0.2
462
Normal
0.2
917
Tumor
0.2
813
Tumor
0.2
534
Normal
0.2
618
Normal
0.2
816
Normal
0.2
648
Normal
0.2
824
Normal
0.2
642
Normal
0.2
916
Normal
0.2
572
Normal
0.2
217
Tumor
0.2
526
Normal
0.2
914
Normal
0.2
564
Normal
0.2
448
Normal
0.2
1044
Normal
0.2
411
Tumor
0.2
364
Normal
0.2
571
Tumor
0.2
126
Normal
0.2
1021
Tumor
0.2
924
Normal
0.2
868
Normal
0.2
112
Tumor
0.2
232
Normal
0.2
343
Tumor
0.2
328
Normal
0.2
386
Normal
0.2
786
Normal
0.2
482
Normal
0.2
311
Tumor
0.2
474
Normal
0.2
662
Normal
0.2
412
Normal
0.2
278
Normal
0.2
464
Normal
0.2
327
Tumor
0.2
857
Tumor
0.2
376
Normal
0.2
467
Tumor
0.1
432
Normal
0.1
138
Normal
0.1
546
Normal
0.1
396
Normal
0.1
742
Normal
0.1
616
Normal
0.1
964
Normal
0.1
1028
Normal
0.1
196
Normal
0.1
866
Normal
0.1
354
Normal
0.1
356
Normal
0.1
944
Normal
0.1
641
Tumor
0.1
388
Normal
0.1
368
Normal
0.1
185
Tumor
0.1
628
Normal
0.1
221
Tumor
0.1
446
Normal
0.1
617
Tumor
0.1
148
Normal
0.1
366
Normal
0.1
312
Normal
0.1
514
Normal
0.1
716
Normal
0.1
422
Normal
0.1
884
Normal
0.1
695
Tumor
0.1
574
Normal
0.1
883
Tumor
0.1
161
Tumor
0.1
494
Normal
0.1
814
Normal
0.0
258
Normal
0.0
466
Normal
0.0
877
Tumor
0.0
568
Normal
0.0
756
Normal
0.0
393
Tumor
0.0
978
Normal
0.0
192
Normal
0.0
666
Normal
0.0
873
Tumor
0.0
545
Tumor
0.0
976
Normal
0.0
922
Normal
0.0
227
Tumor
0.0
696
Normal
0.0
818
Normal
0.0
982
Normal
0.0
284
Normal
0.0
671
Tumor
0.0
661
Tumor
0.0
525
Tumor
0.0
852
Normal
-0.1
958
Normal
-0.1
228
Normal
-0.1
385
Tumor
-0.1
272
Normal
-0.1
363
Tumor
-0.1
513
Tumor
-0.1
516
Normal
-0.1
517
Tumor
-0.1
563
Tumor
-0.1
1042
Normal
-0.1
362
Normal
-0.1
447
Tumor
-0.1
113
Tumor
-0.1
864
Normal
-0.1
188
Normal
-0.1
487
Tumor
-0.1
455
Tumor
-0.1
686
Normal
-0.1
297
Tumor
-0.1
416
Normal
-0.2
452
Normal
-0.2
465
Tumor
-0.2
874
Normal
-0.2
415
Tumor
-0.2
262
Normal
-0.2
125
Tumor
-0.2
963
Tumor
-0.2
647
Tumor
-0.2
212
Normal
-0.2
314
Normal
-0.2
975
Tumor
-0.2
697
Tumor
-0.2
283
Tumor
-0.2
491
Tumor
-0.2
527
Tumor
-0.2
823
Tumor
-0.3
721
Tumor
-0.3
925
Tumor
-0.3
387
Tumor
-0.3
331
Tumor
-0.3
481
Tumor
-0.3
213
Tumor
-0.3
375
Tumor
-0.3
142
Normal
-0.3
957
Tumor
-0.3
391
Tumor
-0.3
463
Tumor
-0.3
1025
Tumor
-0.3
187
Tumor
-0.4
127
Tumor
-0.4
383
Tumor
-0.4
515
Tumor
-0.4
395
Tumor
-0.4
191
Tumor
-0.4
956
Normal
-0.4
365
Tumor
-0.4
851
Tumor
-0.4
145
Tumor
-0.5
557
Tumor
-0.5
211
Tumor
-0.5
1013
Tumor
-0.5
367
Tumor
-0.5
943
Tumor
-0.5
1015
Tumor
-0.5
353
Tumor
-0.5
135
Tumor
-0.5
223
Tumor
-0.5
573
Tumor
-0.5
724
Normal
-0.5
535
Tumor
-0.5
427
Tumor
-0.6
131
Tumor
-0.6
745
Tumor
-0.6
147
Tumor
-0.6
313
Tumor
-0.6
663
Tumor
-0.6
257
Tumor
-0.6
425
Tumor
-0.6
881
Tumor
-0.6
413
Tumor
-0.6
977
Tumor
-0.6
913
Tumor
-0.6
141
Tumor
-0.6
955
Tumor
-0.7
665
Tumor
-0.7
435
Tumor
-0.7
815
Tumor
-0.7
537
Tumor
-0.7
615
Tumor
-0.7
861
Tumor
-0.7
567
Tumor
-0.7
867
Tumor
-0.7
261
Tumor
-0.7
423
Tumor
-0.7
137
Tumor
-0.7
231
Tumor
-0.7
785
Tumor
-0.7
1043
Tumor
-0.8
351
Tumor
-0.8
965
Tumor
-0.8
817
Tumor
-0.8
451
Tumor
-0.8
361
Tumor
-0.8
915
Tumor
-0.8
285
Tumor
-0.8
171
Tumor
-0.8
431
Tumor
-0.8
355
Tumor
-0.9
741
Tumor
-0.9
967
Tumor
-0.9
743
Tumor
-0.9
497
Tumor
-0.9
981
Tumor
-0.9
483
Tumor
-1.0
755
Tumor
-1.0
493
Tumor
-1.0
953
Tumor
-1.0
715
Tumor
-1.0
685
Tumor
-1.0
1027
Tumor
-1.0
473
Tumor
-1.0
267
Tumor
-1.0
1041
Tumor
-1.1
865
Tumor
-1.1
123
Tumor
-1.1
911
Tumor
-1.2
523
Tumor
-1.3
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
