We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EXOC7 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
64.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
62.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
57.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
56.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
55.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
53.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
53.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
53.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
51.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
50.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
48.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
47.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
46.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
44.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
44.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
44.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
44.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
44.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
42.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
42.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
42.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
40.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
40.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
40.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
40.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
39.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
39.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
39.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
39.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
39.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
39.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
38.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
36.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
36.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
34.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
33.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
33.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
33.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
33.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
33.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
33.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
33.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
33.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
33.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
32.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
32.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
31.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
31.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
31.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
30.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
30.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
30.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
30.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
30.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
29.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
29.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
29.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
29.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
29.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
29.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
29.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
29.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
28.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
28.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
28.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
28.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
28.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
28.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
28.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
28.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
28.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
27.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
27.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
27.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
27.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
27.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
27.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
27.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
27.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
27.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
27.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
27.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
27.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
27.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
27.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
27.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
27.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
27.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
27.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
26.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
26.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
26.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
26.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
26.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
26.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
26.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
26.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
26.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
26.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
25.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
25.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
25.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
25.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
25.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
25.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
25.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
24.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
24.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
24.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
24.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
24.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
24.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
24.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
24.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
24.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
24.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
24.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
23.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
23.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
23.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
23.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
23.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
23.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
23.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
23.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
23.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
23.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
23.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
23.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
23.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
23.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
22.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
22.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
22.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
22.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
22.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
22.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
22.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
21.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
21.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
21.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
21.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
21.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
21.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
21.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
21.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
21.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
21.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
21.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
21.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
21.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
21.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
20.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
20.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
20.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
20.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
20.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
20.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
20.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
20.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
20.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
20.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
20.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
20.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
19.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
19.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
19.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
19.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
19.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
19.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
19.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
19.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
19.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
19.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
19.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
19.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
19.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
19.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
18.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
18.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
18.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
18.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
18.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
18.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
18.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
18.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
18.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
18.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
18.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
18.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
18.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
18.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
18.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
17.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
17.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
17.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
17.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
17.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
17.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
17.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
17.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
17.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
17.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
17.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
17.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
17.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
16.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
16.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
16.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
16.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
16.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
16.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
16.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
16.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
16.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
16.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
16.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
16.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
16.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
15.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
15.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
15.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
15.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
15.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
15.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
15.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
15.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
15.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
15.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
15.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
14.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
14.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
14.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
14.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
14.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
14.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
14.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
14.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
14.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
14.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
13.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
13.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
13.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
13.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
13.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
13.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
13.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
13.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
13.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
13.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
13.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
13.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
13.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
13.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
13.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
12.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
12.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
12.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
12.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
12.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
12.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
12.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
12.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
12.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
12.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
12.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
12.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
12.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
12.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
12.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
11.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
11.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
11.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
11.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
11.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
11.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
11.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
11.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
11.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
11.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
11.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
11.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
11.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
11.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
11.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
11.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
11.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
10.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
10.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
10.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
10.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
10.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
10.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
10.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
10.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
10.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
9.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
9.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
9.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
9.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
9.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
9.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
9.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
9.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
9.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
9.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
9.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
9.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
9.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
8.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
8.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
8.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
8.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
8.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
8.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
8.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
8.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
7.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
7.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
7.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
7.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
7.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
7.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
7.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
7.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
7.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
6.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
6.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
6.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
6.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
6.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
6.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
6.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
6.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
5.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
5.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
5.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
5.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
4.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
4.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EXOC7 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.9
Number of samples
231
Samples
Sample
Description
TPM
DO48681
0 years, male, NA, stage:2, alive, 900 days
67.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
60.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
58.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
56.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
55.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
55.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
52.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
50.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
48.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
48.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
47.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
46.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
46.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
42.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
42.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
41.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
40.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
40.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
39.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
39.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
38.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
37.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
37.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
37.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
36.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
36.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
36.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
36.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
35.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
35.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
35.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
35.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
35.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
34.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
33.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
33.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
33.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
33.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
32.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
32.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
32.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
32.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
32.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
30.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
30.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
30.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
30.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
30.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
29.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
29.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
29.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
28.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
28.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
28.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
28.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
28.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
28.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
27.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
27.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
27.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
27.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
27.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
27.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
27.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
27.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
27.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
26.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
26.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
26.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
26.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
26.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
25.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
25.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
25.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
25.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
25.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
25.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
25.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
25.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
25.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
25.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
25.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
24.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
24.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
24.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
24.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
24.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
24.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
24.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
23.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
23.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
23.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
23.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
23.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
23.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
23.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
23.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
23.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
23.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
23.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
23.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
23.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
23.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
22.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
22.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
22.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
22.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
22.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
22.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
22.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
22.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
21.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
21.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
21.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
21.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
21.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
21.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
21.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
20.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
20.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
20.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
20.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
20.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
20.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
20.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
20.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
20.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
20.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
20.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
20.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
20.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
20.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
20.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
20.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
20.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
20.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
19.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
19.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
19.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
19.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
19.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
19.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
19.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
19.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
19.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
19.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
19.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
19.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
19.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
19.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
19.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
19.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
18.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
18.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
18.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
18.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
18.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
18.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
18.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
18.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
18.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
18.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
18.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
18.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
18.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
18.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
18.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
18.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
17.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
17.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
17.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
17.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
17.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
17.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
17.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
17.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
17.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
17.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
17.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
17.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
17.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
16.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
16.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
16.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
16.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
15.9
DO48728
0 years, female, NA, stage:2, alive, 150 days
15.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
15.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
15.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
15.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
15.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
15.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
15.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
15.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
15.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
15.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
15.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
15.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
15.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
15.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
14.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
14.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
14.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
14.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
14.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
14.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
14.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
13.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
13.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
13.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
13.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
12.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
12.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
11.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
11.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
11.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
11.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
11.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
11.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
11.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
11.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
10.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
10.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
10.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
9.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
9.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
8.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
6.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
5.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
533
Tumor
0.8
131
Tumor
0.7
271
Tumor
0.6
553
Tumor
0.6
257
Tumor
0.5
425
Tumor
0.5
135
Tumor
0.5
527
Tumor
0.5
1025
Tumor
0.4
817
Tumor
0.4
471
Tumor
0.4
363
Tumor
0.4
815
Tumor
0.4
1027
Tumor
0.4
395
Tumor
0.4
635
Tumor
0.4
491
Tumor
0.4
435
Tumor
0.4
695
Tumor
0.4
497
Tumor
0.3
297
Tumor
0.3
1031
Tumor
0.3
447
Tumor
0.3
343
Tumor
0.3
743
Tumor
0.3
431
Tumor
0.3
975
Tumor
0.3
917
Tumor
0.3
137
Tumor
0.3
455
Tumor
0.3
147
Tumor
0.3
445
Tumor
0.3
957
Tumor
0.3
881
Tumor
0.3
355
Tumor
0.3
538
Normal
0.3
127
Tumor
0.2
473
Tumor
0.2
125
Tumor
0.2
863
Tumor
0.2
852
Normal
0.2
478
Normal
0.2
427
Tumor
0.2
685
Tumor
0.2
444
Normal
0.2
1045
Tumor
0.2
524
Normal
0.2
913
Tumor
0.2
865
Tumor
0.2
477
Tumor
0.2
545
Tumor
0.2
727
Tumor
0.2
778
Normal
0.2
814
Normal
0.2
671
Tumor
0.2
884
Normal
0.2
261
Tumor
0.2
1021
Tumor
0.2
617
Tumor
0.2
492
Normal
0.2
311
Tumor
0.2
813
Tumor
0.2
921
Tumor
0.2
285
Tumor
0.2
786
Normal
0.2
554
Normal
0.2
525
Tumor
0.2
721
Tumor
0.2
421
Tumor
0.2
224
Normal
0.2
528
Normal
0.1
823
Tumor
0.1
546
Normal
0.1
513
Tumor
0.1
393
Tumor
0.1
1042
Normal
0.1
351
Tumor
0.1
745
Tumor
0.1
192
Normal
0.1
741
Tumor
0.1
498
Normal
0.1
536
Normal
0.1
851
Tumor
0.1
816
Normal
0.1
558
Normal
0.1
221
Tumor
0.1
227
Tumor
0.1
672
Normal
0.1
916
Normal
0.1
563
Tumor
0.1
1022
Normal
0.1
868
Normal
0.1
515
Tumor
0.1
883
Tumor
0.1
1028
Normal
0.1
284
Normal
0.1
146
Normal
0.1
777
Tumor
0.1
1044
Normal
0.1
1046
Normal
0.1
493
Tumor
0.1
924
Normal
0.1
534
Normal
0.1
518
Normal
0.1
411
Tumor
0.1
516
Normal
0.1
262
Normal
0.1
434
Normal
0.1
785
Tumor
0.1
113
Tumor
0.1
977
Tumor
0.1
461
Tumor
0.1
696
Normal
0.1
573
Tumor
0.1
861
Tumor
0.1
574
Normal
0.1
697
Tumor
0.1
647
Tumor
0.1
955
Tumor
0.1
526
Normal
0.1
953
Tumor
0.1
922
Normal
0.1
187
Tumor
0.1
873
Tumor
0.1
185
Tumor
0.1
385
Tumor
0.1
943
Tumor
0.1
918
Normal
0.1
313
Tumor
0.1
978
Normal
0.1
641
Tumor
0.1
926
Normal
0.1
874
Normal
0.1
877
Tumor
0.1
912
Normal
0.1
232
Normal
0.1
286
Normal
0.0
867
Tumor
0.0
984
Normal
0.0
126
Normal
0.0
864
Normal
0.0
422
Normal
0.0
663
Tumor
0.0
433
Tumor
0.0
627
Tumor
0.0
958
Normal
0.0
824
Normal
0.0
145
Tumor
0.0
467
Tumor
0.0
268
Normal
0.0
857
Tumor
0.0
966
Normal
0.0
277
Tumor
0.0
384
Normal
0.0
494
Normal
0.0
1032
Normal
0.0
212
Normal
0.0
124
Normal
0.0
517
Tumor
0.0
716
Normal
0.0
662
Normal
0.0
882
Normal
0.0
383
Tumor
0.0
428
Normal
0.0
982
Normal
0.0
357
Tumor
0.0
715
Tumor
0.0
914
Normal
0.0
396
Normal
0.0
686
Normal
0.0
211
Tumor
0.0
1026
Normal
0.0
462
Normal
0.0
112
Tumor
0.0
866
Normal
0.0
976
Normal
0.0
111
Normal
0.0
138
Normal
0.0
283
Tumor
0.0
141
Tumor
0.0
468
Normal
0.0
756
Normal
0.0
448
Normal
0.0
364
Normal
0.0
474
Normal
0.0
728
Normal
0.0
818
Normal
0.0
213
Tumor
0.0
312
Normal
0.0
954
Normal
0.0
188
Normal
0.0
911
Tumor
0.0
738
Normal
0.0
386
Normal
0.0
981
Tumor
0.0
443
Tumor
0.0
142
Normal
0.0
968
Normal
0.0
488
Normal
0.0
472
Normal
0.0
628
Normal
0.0
925
Tumor
0.0
514
Normal
0.0
484
Normal
0.0
481
Tumor
0.0
414
Normal
0.0
523
Tumor
0.0
698
Normal
0.0
944
Normal
0.0
1014
Normal
0.0
564
Normal
0.0
963
Tumor
0.0
661
Tumor
0.0
535
Tumor
0.0
1016
Normal
0.0
482
Normal
0.0
746
Normal
0.0
568
Normal
0.0
666
Normal
0.0
272
Normal
0.0
937
Tumor
0.0
572
Normal
0.0
956
Normal
0.0
636
Normal
0.0
737
Tumor
0.0
858
Normal
0.0
862
Normal
0.0
724
Normal
0.0
362
Normal
0.0
714
Normal
0.0
218
Normal
0.0
415
Tumor
0.0
923
Tumor
0.0
664
Normal
0.0
416
Normal
0.0
722
Normal
0.0
878
Normal
0.0
642
Normal
0.0
132
Normal
0.0
228
Normal
0.0
352
Normal
0.0
567
Tumor
0.0
128
Normal
0.0
332
Normal
0.0
344
Normal
0.0
723
Tumor
0.0
616
Normal
0.0
952
Normal
0.0
412
Normal
-0.1
648
Normal
-0.1
713
Tumor
-0.1
278
Normal
-0.1
424
Normal
-0.1
214
Normal
-0.1
114
Normal
-0.1
136
Normal
-0.1
258
Normal
-0.1
148
Normal
-0.1
356
Normal
-0.1
1041
Tumor
-0.1
423
Tumor
-0.1
964
Normal
-0.1
1015
Tumor
-0.1
744
Normal
-0.1
353
Tumor
-0.1
231
Tumor
-0.1
223
Tumor
-0.1
376
Normal
-0.1
938
Normal
-0.1
464
Normal
-0.1
394
Normal
-0.1
1043
Tumor
-0.1
413
Tumor
-0.1
456
Normal
-0.1
328
Normal
-0.1
298
Normal
-0.1
742
Normal
-0.1
392
Normal
-0.1
465
Tumor
-0.1
557
Tumor
-0.1
388
Normal
-0.1
361
Tumor
-0.1
665
Tumor
-0.1
965
Tumor
-0.1
451
Tumor
-0.1
432
Normal
-0.1
426
Normal
-0.1
466
Normal
-0.1
354
Normal
-0.1
436
Normal
-0.1
365
Tumor
-0.1
446
Normal
-0.1
983
Tumor
-0.1
314
Normal
-0.2
463
Tumor
-0.2
217
Tumor
-0.2
191
Tumor
-0.2
327
Tumor
-0.2
967
Tumor
-0.2
618
Normal
-0.2
267
Tumor
-0.2
196
Normal
-0.2
487
Tumor
-0.2
367
Tumor
-0.2
375
Tumor
-0.2
1013
Tumor
-0.2
171
Tumor
-0.2
186
Normal
-0.2
915
Tumor
-0.2
755
Tumor
-0.2
951
Tumor
-0.2
358
Normal
-0.2
366
Normal
-0.2
195
Tumor
-0.2
123
Tumor
-0.2
483
Tumor
-0.2
368
Normal
-0.2
162
Normal
-0.2
615
Tumor
-0.3
222
Normal
-0.3
571
Tumor
-0.3
537
Tumor
-0.3
172
Normal
-0.3
331
Tumor
-0.3
342
Normal
-0.3
161
Tumor
-0.3
391
Tumor
-0.3
452
Normal
-0.3
387
Tumor
-0.3
341
Tumor
-0.4
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.