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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C1S is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
638.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
2335.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
2210.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2197.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
2016.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
1905.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
1812.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
1776.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1745.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
1709.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
1709.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1668.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1649.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
1643.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
1632.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
1565.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
1558.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
1537.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1507.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1498.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1474.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
1467.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1447.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1441.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
1421.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1407.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
1377.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1368.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
1367.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
1337.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
1317.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1306.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1294.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
1283.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1281.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
1267.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
1266.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1222.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1208.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1207.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1206.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1194.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1194.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1183.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1183.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1180.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
1172.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1171.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1168.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
1165.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1163.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1157.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1150.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1125.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1121.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
1113.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
1112.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
1109.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
1105.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
1089.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1077.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1071.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
1063.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1061.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1051.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
1050.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1044.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1039.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1033.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
1031.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
1028.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1006.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1006.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
997.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
987.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
984.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
981.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
973.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
970.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
967.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
966.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
961.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
957.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
950.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
949.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
944.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
944.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
940.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
928.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
924.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
912.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
908.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
902.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
890.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
890.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
885.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
881.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
880.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
879.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
868.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
864.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
863.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
859.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
850.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
847.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
833.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
812.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
809.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
806.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
805.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
804.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
802.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
797.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
796.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
791.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
791.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
784.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
774.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
757.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
755.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
752.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
749.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
747.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
740.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
735.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
729.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
723.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
721.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
719.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
718.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
718.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
716.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
713.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
712.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
707.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
707.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
699.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
697.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
692.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
686.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
686.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
682.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
672.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
670.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
668.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
664.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
664.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
664.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
662.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
653.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
652.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
643.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
637.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
635.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
632.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
629.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
629.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
625.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
624.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
618.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
613.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
613.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
612.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
611.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
609.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
608.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
608.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
607.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
603.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
602.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
602.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
599.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
593.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
588.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
581.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
579.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
578.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
578.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
568.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
563.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
562.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
551.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
550.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
549.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
548.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
548.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
543.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
542.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
540.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
537.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
536.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
528.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
522.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
514.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
512.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
509.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
507.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
505.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
503.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
501.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
500.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
499.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
497.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
496.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
495.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
492.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
481.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
480.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
480.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
479.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
475.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
472.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
465.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
464.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
462.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
458.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
456.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
452.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
450.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
441.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
440.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
438.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
435.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
434.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
430.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
429.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
428.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
426.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
419.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
410.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
409.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
407.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
404.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
394.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
392.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
390.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
385.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
383.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
382.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
380.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
378.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
376.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
375.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
370.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
369.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
367.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
366.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
364.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
363.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
361.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
345.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
337.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
334.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
333.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
331.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
329.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
327.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
324.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
321.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
321.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
319.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
319.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
316.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
313.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
310.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
309.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
299.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
294.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
292.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
289.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
288.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
288.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
287.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
286.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
285.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
280.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
280.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
274.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
265.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
262.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
262.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
260.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
259.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
256.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
254.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
253.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
245.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
243.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
242.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
235.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
234.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
234.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
232.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
230.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
228.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
228.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
226.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
217.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
209.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
203.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
202.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
202.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
200.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
200.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
200.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
199.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
197.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
195.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
186.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
183.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
178.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
175.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
175.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
171.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
171.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
169.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
166.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
159.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
155.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
154.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
154.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
153.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
150.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
144.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
142.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
138.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
129.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
125.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
119.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
119.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
118.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
115.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
110.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
108.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
108.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
104.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
98.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
96.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
85.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
82.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
81.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
80.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
74.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
72.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
68.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
67.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
66.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
65.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
62.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
59.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
58.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
58.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
55.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
49.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
48.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
48.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
46.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
44.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
36.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
30.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
25.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
23.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C1S is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
758.6
Number of samples
231
Samples
Sample
Description
TPM
DO23511
0 years, female, NA, stage:3, dead, 180 days
2591.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
2379.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
2291.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
2109.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
1990.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
1964.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
1917.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
1869.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1864.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
1860.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
1790.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
1760.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1634.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
1602.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
1599.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
1588.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1575.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
1535.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
1520.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
1492.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
1486.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
1459.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
1402.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1402.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
1377.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
1346.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1345.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
1345.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
1331.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
1310.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
1262.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
1259.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
1227.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
1216.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
1207.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
1199.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
1191.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
1182.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
1178.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
1176.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
1171.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
1163.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
1163.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
1161.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
1159.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
1159.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
1147.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
1145.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
1135.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
1126.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1114.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
1112.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
1086.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
1078.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
1076.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
1066.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
1057.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1032.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1026.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
1015.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
1005.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
1001.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
993.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
987.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
985.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
983.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
983.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
982.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
968.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
965.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
955.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
954.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
951.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
951.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
949.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
948.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
931.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
931.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
926.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
889.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
880.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
865.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
865.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
865.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
862.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
859.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
856.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
852.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
850.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
837.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
831.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
820.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
818.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
813.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
811.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
809.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
779.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
779.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
773.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
769.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
767.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
765.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
765.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
764.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
764.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
761.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
757.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
748.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
736.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
735.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
729.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
723.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
723.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
717.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
716.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
714.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
706.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
701.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
675.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
667.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
667.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
656.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
655.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
651.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
651.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
650.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
635.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
634.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
628.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
619.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
611.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
603.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
601.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
593.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
589.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
573.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
570.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
567.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
564.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
549.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
547.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
541.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
536.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
533.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
529.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
526.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
519.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
511.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
508.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
505.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
503.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
503.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
501.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
481.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
476.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
469.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
458.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
450.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
432.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
418.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
411.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
408.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
406.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
405.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
400.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
389.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
389.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
378.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
378.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
376.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
368.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
362.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
360.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
360.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
359.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
352.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
351.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
343.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
342.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
334.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
332.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
328.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
326.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
321.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
310.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
298.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
294.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
293.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
287.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
283.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
278.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
277.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
276.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
274.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
272.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
270.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
253.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
244.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
239.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
238.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
231.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
230.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
228.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
228.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
218.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
215.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
213.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
190.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
185.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
178.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
178.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
177.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
173.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
163.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
152.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
150.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
119.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
118.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
111.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
109.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
104.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
101.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
88.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
78.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
74.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
74.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
70.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
53.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
45.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
31.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
13.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
635
Tumor
2.0
937
Tumor
1.4
425
Tumor
1.3
745
Tumor
1.0
113
Tumor
1.0
573
Tumor
0.9
823
Tumor
0.8
975
Tumor
0.8
697
Tumor
0.7
135
Tumor
0.7
981
Tumor
0.7
857
Tumor
0.6
713
Tumor
0.6
411
Tumor
0.6
1015
Tumor
0.6
393
Tumor
0.5
195
Tumor
0.5
477
Tumor
0.5
665
Tumor
0.5
538
Normal
0.5
557
Tumor
0.5
525
Tumor
0.5
327
Tumor
0.5
755
Tumor
0.5
1044
Normal
0.4
492
Normal
0.4
217
Tumor
0.4
267
Tumor
0.4
392
Normal
0.4
526
Normal
0.4
545
Tumor
0.4
817
Tumor
0.4
471
Tumor
0.4
218
Normal
0.4
313
Tumor
0.4
421
Tumor
0.4
355
Tumor
0.4
877
Tumor
0.4
112
Tumor
0.4
527
Tumor
0.3
636
Normal
0.3
523
Tumor
0.3
615
Tumor
0.3
187
Tumor
0.3
554
Normal
0.3
498
Normal
0.3
353
Tumor
0.3
515
Tumor
0.3
723
Tumor
0.3
883
Tumor
0.3
1045
Tumor
0.3
455
Tumor
0.3
363
Tumor
0.3
223
Tumor
0.2
785
Tumor
0.2
647
Tumor
0.2
443
Tumor
0.2
448
Normal
0.2
924
Normal
0.2
452
Normal
0.2
563
Tumor
0.2
426
Normal
0.2
944
Normal
0.2
536
Normal
0.2
982
Normal
0.2
192
Normal
0.2
956
Normal
0.2
375
Tumor
0.2
491
Tumor
0.2
433
Tumor
0.2
963
Tumor
0.2
286
Normal
0.2
423
Tumor
0.2
474
Normal
0.2
444
Normal
0.2
568
Normal
0.2
422
Normal
0.2
696
Normal
0.2
461
Tumor
0.2
514
Normal
0.2
224
Normal
0.2
343
Tumor
0.2
816
Normal
0.1
1028
Normal
0.1
141
Tumor
0.1
483
Tumor
0.1
145
Tumor
0.1
813
Tumor
0.1
352
Normal
0.1
147
Tumor
0.1
395
Tumor
0.1
913
Tumor
0.1
1014
Normal
0.1
916
Normal
0.1
383
Tumor
0.1
415
Tumor
0.1
818
Normal
0.1
277
Tumor
0.1
142
Normal
0.1
978
Normal
0.1
396
Normal
0.1
311
Tumor
0.1
394
Normal
0.1
546
Normal
0.1
354
Normal
0.1
1043
Tumor
0.1
618
Normal
0.1
984
Normal
0.1
342
Normal
0.1
746
Normal
0.1
1026
Normal
0.1
467
Tumor
0.1
424
Normal
0.1
368
Normal
0.1
938
Normal
0.1
861
Tumor
0.1
862
Normal
0.1
212
Normal
0.1
196
Normal
0.1
915
Tumor
0.1
686
Normal
0.0
778
Normal
0.0
742
Normal
0.0
387
Tumor
0.0
518
Normal
0.0
866
Normal
0.0
957
Tumor
0.0
384
Normal
0.0
917
Tumor
0.0
261
Tumor
0.0
744
Normal
0.0
262
Normal
0.0
922
Normal
0.0
955
Tumor
0.0
465
Tumor
0.0
528
Normal
0.0
858
Normal
0.0
344
Normal
0.0
874
Normal
0.0
616
Normal
0.0
756
Normal
0.0
191
Tumor
0.0
1022
Normal
0.0
558
Normal
0.0
462
Normal
0.0
361
Tumor
0.0
162
Normal
0.0
376
Normal
0.0
666
Normal
0.0
358
Normal
0.0
332
Normal
0.0
524
Normal
0.0
232
Normal
0.0
1016
Normal
0.0
574
Normal
0.0
564
Normal
0.0
472
Normal
0.0
446
Normal
0.0
714
Normal
0.0
414
Normal
0.0
958
Normal
0.0
553
Tumor
0.0
111
Normal
0.0
487
Tumor
0.0
284
Normal
0.0
516
Normal
0.0
952
Normal
0.0
494
Normal
0.0
447
Tumor
0.0
451
Tumor
0.0
976
Normal
0.0
466
Normal
0.0
124
Normal
0.0
213
Tumor
0.0
721
Tumor
0.0
517
Tumor
0.0
852
Normal
0.0
672
Normal
0.0
222
Normal
-0.1
642
Normal
-0.1
214
Normal
-0.1
824
Normal
-0.1
1025
Tumor
-0.1
884
Normal
-0.1
1042
Normal
-0.1
648
Normal
-0.1
138
Normal
-0.1
1046
Normal
-0.1
728
Normal
-0.1
314
Normal
-0.1
468
Normal
-0.1
185
Tumor
-0.1
427
Tumor
-0.1
478
Normal
-0.1
464
Normal
-0.1
628
Normal
-0.1
428
Normal
-0.1
456
Normal
-0.1
964
Normal
-0.1
786
Normal
-0.1
257
Tumor
-0.1
136
Normal
-0.1
365
Tumor
-0.1
132
Normal
-0.1
482
Normal
-0.1
364
Normal
-0.1
873
Tumor
-0.1
445
Tumor
-0.1
172
Normal
-0.1
484
Normal
-0.1
926
Normal
-0.1
954
Normal
-0.1
114
Normal
-0.1
814
Normal
-0.1
851
Tumor
-0.1
572
Normal
-0.1
137
Tumor
-0.1
268
Normal
-0.1
534
Normal
-0.1
386
Normal
-0.1
148
Normal
-0.1
297
Tumor
-0.1
1021
Tumor
-0.1
227
Tumor
-0.1
968
Normal
-0.1
228
Normal
-0.1
664
Normal
-0.1
864
Normal
-0.1
567
Tumor
-0.1
722
Normal
-0.1
741
Tumor
-0.1
535
Tumor
-0.1
966
Normal
-0.2
617
Tumor
-0.2
716
Normal
-0.2
671
Tumor
-0.2
388
Normal
-0.2
328
Normal
-0.2
727
Tumor
-0.2
881
Tumor
-0.2
662
Normal
-0.2
146
Normal
-0.2
698
Normal
-0.2
186
Normal
-0.2
356
Normal
-0.2
431
Tumor
-0.2
882
Normal
-0.2
914
Normal
-0.2
493
Tumor
-0.2
488
Normal
-0.2
868
Normal
-0.2
738
Normal
-0.2
126
Normal
-0.2
312
Normal
-0.2
436
Normal
-0.2
434
Normal
-0.2
943
Tumor
-0.2
1041
Tumor
-0.2
432
Normal
-0.2
412
Normal
-0.2
977
Tumor
-0.2
863
Tumor
-0.2
188
Normal
-0.2
272
Normal
-0.2
878
Normal
-0.2
513
Tumor
-0.3
867
Tumor
-0.3
918
Normal
-0.3
416
Normal
-0.3
481
Tumor
-0.3
715
Tumor
-0.3
362
Normal
-0.3
777
Tumor
-0.3
128
Normal
-0.3
258
Normal
-0.3
685
Tumor
-0.3
161
Tumor
-0.3
1032
Normal
-0.3
298
Normal
-0.3
912
Normal
-0.3
391
Tumor
-0.3
278
Normal
-0.3
533
Tumor
-0.3
283
Tumor
-0.3
663
Tumor
-0.3
366
Normal
-0.3
127
Tumor
-0.4
737
Tumor
-0.4
911
Tumor
-0.4
367
Tumor
-0.4
627
Tumor
-0.4
923
Tumor
-0.4
271
Tumor
-0.4
925
Tumor
-0.4
865
Tumor
-0.4
537
Tumor
-0.4
385
Tumor
-0.4
341
Tumor
-0.5
331
Tumor
-0.5
131
Tumor
-0.5
571
Tumor
-0.5
695
Tumor
-0.5
921
Tumor
-0.5
724
Normal
-0.5
967
Tumor
-0.5
497
Tumor
-0.5
951
Tumor
-0.5
641
Tumor
-0.6
953
Tumor
-0.6
221
Tumor
-0.6
357
Tumor
-0.6
983
Tumor
-0.6
463
Tumor
-0.7
1027
Tumor
-0.7
1013
Tumor
-0.7
171
Tumor
-0.7
285
Tumor
-0.8
211
Tumor
-0.8
473
Tumor
-0.8
1031
Tumor
-0.8
231
Tumor
-0.8
413
Tumor
-0.8
815
Tumor
-0.9
125
Tumor
-0.9
351
Tumor
-1.0
123
Tumor
-1.1
435
Tumor
-1.1
965
Tumor
-1.2
661
Tumor
-1.4
743
Tumor
-1.5
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
