HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:20.8 nTPM
HPA Brain:49.1 nTPM
GTEx:20.8 nTPM
FANTOM5:79.9 Scaled Tags Per Million
Pig:90.7 nTPM
Mouse:133.5 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003303Antibody HPA028872Antibody HPA030445Antibody CAB073417
Glial cells Not detectedLowNot detectedNot detected
Neuronal cells MediumMediumNot detectedLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 49.1
Sample id Sample description nTPM
Hippocampus
nTPM: 42.0
1898 Male, age 80, left hemisphere 61.0
1855 Male, age 76, left hemisphere 51.5
2621 Female, age 67, right hemisphere 46.0
1911 Female, age 85, right hemisphere 33.8
2148 Female, age 91, left hemisphere 30.3
2529 Female, age 94, left hemisphere 29.3
Dentate gyrus
nTPM: 40.3
1927 Female, age 91, both hemispheres 48.7
2010 Male, age 76, both hemispheres 48.7
2246 Female, age 85, both hemispheres 43.0
2530 Female, age 94, left hemisphere 38.3
2531 Female, age 67, both hemispheres 37.4
2528 Male, age 74, both hemispheres 25.9
Entorhinal gyrus
nTPM: 33.0
2764 Male, age 80, right hemisphere 37.4
1938 Female, age 85, left hemisphere 34.6
1787 Male, age 76, left hemisphere 32.2
2686 Male, age 75, right hemisphere 32.2
2613 Female, age 94, left hemisphere 31.5
2117 Female, age 91, right hemisphere 30.0
Hippocampus, CA1
nTPM: 44.5
2749 Male, age 80, left hemisphere 64.7
1873 Female, age 85, both hemispheres 47.4
2045 Male, age 76, both hemispheres 45.9
2082 Female, age 91, right hemisphere 32.7
2527 Male, age 74, both hemispheres 31.7
Hippocampus, CA2
nTPM: 42.8
1892 Male, age 76, both hemispheres 63.6
1963 Male, age 80, left hemisphere 55.9
1940 Female, age 85, left hemisphere 39.2
2437 Female, age 94, left hemisphere 35.4
2113 Female, age 91, right hemisphere 31.5
2249 Male, age 74, both hemispheres 31.5
Hippocampus, CA3
nTPM: 43.5
2137 Male, age 80, left hemisphere 56.2
2620 Female, age 94, left hemisphere 53.7
1867 Male, age 76, both hemispheres 52.3
1891 Female, age 85, both hemispheres 45.6
2436 Male, age 74, both hemispheres 30.5
2861 Female, age 67, both hemispheres 22.7
Parahippocampal cortex
nTPM: 38.7
1850 Male, age 80, both hemispheres 55.3
2245 Female, age 91, both hemispheres 42.5
1933 Female, age 85, both hemispheres 41.2
2018 Male, age 76, both hemispheres 41.2
2693 Female, age 94, both hemispheres 40.2
2532 Female, age 72, left hemisphere 39.8
2622 Female, age 67, right hemisphere 35.4
1990 Female, age 91, right hemisphere 33.8
2250 Female, age 67, right hemisphere 30.2
2692 Male, age 74, both hemispheres 27.0
Perirhinal gyrus
nTPM: 49.1
1841 Female, age 85, right hemisphere 59.3
1794 Male, age 80, right hemisphere 51.0
2521 Female, age 94, right hemisphere 47.3
1847 Female, age 91, left hemisphere 46.4
2848 Male, age 76, right hemisphere 41.7
Subiculum
nTPM: 36.9
1901 Male, age 80, both hemispheres 52.6
2042 Male, age 76, both hemispheres 37.6
1977 Female, age 85, both hemispheres 36.3
2438 Female, age 94, left hemisphere 35.4
2619 Male, age 74, both hemispheres 32.2
2729 Female, age 91, right hemisphere 27.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 20.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.8
Samples: 197

Max nTPM: 64.1
Min nTPM: 6.0
Std nTPM: 9.8
Median nTPM: 18.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 64.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 52.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 50.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 49.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 46.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 45.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 43.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 43.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 42.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 41.1
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 40.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 79.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.9
FF:10169-103B7 60 years, female 101.7
FF:10153-102I9 76 years, female 58.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 90.7
Pig sample Sample description nTPM
Subiculum
nTPM: 70.3
Samples: 4

Max nTPM: 84.9
Min nTPM: 63.4
Sample A Female 84.9
Sample B Female 66.7
Sample C Male 63.4
Sample D Male 66.1
Dorsal hippocampus
nTPM: 90.7
Samples: 4

Max nTPM: 108.8
Min nTPM: 75.6
Sample A Female 108.8
Sample B Female 92.1
Sample C Male 86.1
Sample D Male 75.6
Entorhinal cortex
nTPM: 66.7
Samples: 4

Max nTPM: 70.2
Min nTPM: 63.6
Sample A Female 67.1
Sample B Female 70.2
Sample C Male 63.6
Sample D Male 66.0
Ventral hippocampus
nTPM: 73.8
Samples: 4

Max nTPM: 95.1
Min nTPM: 65.4
Sample A Female 65.6
Sample B Female 65.4
Sample C Male 69.0
Sample D Male 95.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 133.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 100.2
Samples: 4

Max nTPM: 109.9
Min nTPM: 85.4
Sample A Male 96.7
Sample B Male 108.9
Sample C Female 109.9
Sample D Female 85.4
Hippocampal formation
nTPM: 133.5
Samples: 4

Max nTPM: 140.7
Min nTPM: 120.1
Sample A Male 140.7
Sample B Male 138.0
Sample C Female 135.2
Sample D Female 120.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
70539166 Antisense, RP_050324_02_B12, Mouse strain C57BL/6J (56 days, male) 2.1

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