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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MOB2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
50.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
35.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
35.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
34.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
34.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
33.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
32.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
31.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
30.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
30.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
29.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
29.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
29.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
29.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
28.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
28.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
28.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
27.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
27.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
27.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
27.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
27.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
26.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
26.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
26.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
26.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
26.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
25.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
25.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
25.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
25.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
25.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
25.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
24.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
24.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
24.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
24.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
24.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
24.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
24.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
24.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
23.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
23.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
23.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
23.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
22.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
22.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
22.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
22.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
22.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
22.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
22.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
22.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
22.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
21.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
21.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
21.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
21.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
21.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
21.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
21.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
21.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
21.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
21.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
21.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
21.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
20.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
20.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
20.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
20.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
20.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
20.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
20.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
20.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
20.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
20.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
20.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
20.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
20.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
20.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
20.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
19.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
19.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
19.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
19.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
19.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
19.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
19.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
19.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
19.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
19.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
19.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
19.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
19.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
19.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
19.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
19.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
19.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
18.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
18.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
18.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
18.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
18.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
18.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
18.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
18.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
18.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
18.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
18.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
18.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
18.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
18.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
18.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
18.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
18.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
18.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
18.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
18.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
18.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
18.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
17.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
17.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
17.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
17.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
17.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
17.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
17.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
17.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
17.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
17.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
17.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
17.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
17.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
17.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
17.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
17.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
17.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
17.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
17.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
17.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
17.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
17.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
17.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
17.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
17.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
16.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
16.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
16.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
16.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
16.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
16.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
16.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
16.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
16.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
16.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
16.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
16.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
16.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
16.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
16.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
16.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
16.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
16.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
16.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
16.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
16.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
16.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
16.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
16.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
16.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
16.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
16.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
16.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
15.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
15.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
15.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
15.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
15.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
15.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
15.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
15.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
15.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
15.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
15.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
15.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
15.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
15.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
15.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
15.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
15.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
15.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
15.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
15.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
15.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
15.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
15.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
15.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
15.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
15.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
15.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
15.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
14.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
14.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
14.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
14.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
14.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
14.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
14.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
14.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
14.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
14.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
14.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
14.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
14.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
14.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
14.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
14.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
14.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
14.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
14.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
14.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
14.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
14.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
14.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
14.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
14.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
14.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
14.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
14.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
14.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
13.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
13.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
13.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
13.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
13.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
13.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
13.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
13.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
13.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
13.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
13.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
13.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
13.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
13.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
13.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
13.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
13.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
13.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
13.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
13.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
13.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
13.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
13.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
13.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
13.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
13.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
13.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
13.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
13.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
12.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
12.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
12.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
12.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
12.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
12.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
12.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
12.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
12.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
12.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
12.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
12.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
12.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
12.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
12.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
12.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
12.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
12.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
12.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
12.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
12.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
12.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
12.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
12.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
11.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
11.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
11.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
11.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
11.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
11.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
11.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
11.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
11.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
11.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
11.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
11.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
11.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
11.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
11.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
11.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
11.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
11.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
11.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
11.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
11.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
11.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
11.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
11.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
11.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
11.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
11.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
10.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
10.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
10.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
10.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
10.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
10.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
10.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
10.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
10.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
10.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
10.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
10.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
10.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
10.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
10.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
10.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
10.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
10.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
10.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
10.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
10.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
10.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
10.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
10.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
10.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
10.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
10.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
9.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
9.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
9.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
9.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
9.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
9.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
8.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
8.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
8.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
7.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
7.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
6.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
6.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MOB2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.5
Number of samples
231
Samples
Sample
Description
TPM
DO45299
0 years, female, NA, stage:1, alive, 1440 days
36.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
34.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
32.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
32.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
29.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
27.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
27.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
27.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
27.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
26.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
25.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
25.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
25.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
25.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
23.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
23.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
23.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
22.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
22.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
21.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
20.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
20.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
20.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
20.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
19.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
19.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
19.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
19.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
19.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
19.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
18.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
18.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
18.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
18.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
18.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
18.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
18.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
17.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
17.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
17.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
17.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
17.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
17.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
17.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
17.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
17.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
17.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
16.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
16.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
16.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
16.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
16.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
16.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
16.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
16.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
16.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
16.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
16.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
16.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
16.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
16.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
15.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
15.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
15.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
15.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
15.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
15.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
15.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
15.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
15.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
15.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
15.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
15.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
15.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
14.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
14.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
14.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
14.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
14.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
14.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
14.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
14.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
14.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
14.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
14.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
14.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
14.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
13.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
13.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
13.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
13.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
13.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
13.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
13.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
13.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
13.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
13.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
13.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
13.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
13.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
13.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
13.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
13.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
13.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
13.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
13.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
13.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
13.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
13.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
13.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
12.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
12.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
12.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
12.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
12.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
12.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
12.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
12.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
12.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
12.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
12.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
12.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
12.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
12.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
11.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
11.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
11.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
11.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
11.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
11.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
11.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
11.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
11.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
11.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
11.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
11.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
11.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
11.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
11.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
11.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
11.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
11.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
11.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
10.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
10.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
10.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
10.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
10.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
10.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
10.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
10.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
10.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
10.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
10.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
10.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
10.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
10.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
10.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
10.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
9.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
9.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
9.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
9.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
9.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
9.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
9.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
9.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
9.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
9.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
9.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
9.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
9.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
9.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
9.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
9.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
9.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
9.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
9.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
9.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
9.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
8.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
8.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
8.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
8.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
8.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
8.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
8.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
8.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
8.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
8.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
8.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
8.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
8.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
8.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
8.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
8.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
8.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
8.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
7.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
7.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
7.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
7.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
7.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
7.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
7.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
7.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
7.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
7.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
7.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
7.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
7.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
6.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
6.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
6.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
6.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
6.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
6.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
6.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
5.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
5.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
5.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
4.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1027
Tumor
0.8
545
Tumor
0.7
285
Tumor
0.7
473
Tumor
0.6
857
Tumor
0.5
916
Normal
0.5
513
Tumor
0.5
737
Tumor
0.5
483
Tumor
0.5
913
Tumor
0.4
487
Tumor
0.4
463
Tumor
0.4
536
Normal
0.4
925
Tumor
0.4
817
Tumor
0.4
777
Tumor
0.4
461
Tumor
0.4
952
Normal
0.4
883
Tumor
0.4
981
Tumor
0.3
724
Normal
0.3
1032
Normal
0.3
958
Normal
0.3
721
Tumor
0.3
955
Tumor
0.3
617
Tumor
0.3
1042
Normal
0.3
924
Normal
0.3
851
Tumor
0.3
415
Tumor
0.3
472
Normal
0.3
1021
Tumor
0.3
956
Normal
0.3
713
Tumor
0.3
492
Normal
0.3
865
Tumor
0.3
538
Normal
0.3
147
Tumor
0.3
1022
Normal
0.3
728
Normal
0.3
528
Normal
0.3
915
Tumor
0.3
938
Normal
0.3
1044
Normal
0.3
493
Tumor
0.3
498
Normal
0.3
852
Normal
0.3
921
Tumor
0.3
478
Normal
0.3
963
Tumor
0.3
978
Normal
0.3
785
Tumor
0.3
471
Tumor
0.3
823
Tumor
0.3
954
Normal
0.3
484
Normal
0.3
1015
Tumor
0.3
212
Normal
0.3
723
Tumor
0.3
815
Tumor
0.3
546
Normal
0.3
746
Normal
0.3
984
Normal
0.3
968
Normal
0.2
1031
Tumor
0.2
714
Normal
0.2
918
Normal
0.2
563
Tumor
0.2
884
Normal
0.2
1014
Normal
0.2
686
Normal
0.2
514
Normal
0.2
1045
Tumor
0.2
967
Tumor
0.2
922
Normal
0.2
516
Normal
0.2
873
Tumor
0.2
647
Tumor
0.2
616
Normal
0.2
917
Tumor
0.2
283
Tumor
0.2
257
Tumor
0.2
716
Normal
0.2
957
Tumor
0.2
741
Tumor
0.2
524
Normal
0.2
171
Tumor
0.2
882
Normal
0.2
943
Tumor
0.2
671
Tumor
0.2
518
Normal
0.2
328
Normal
0.2
742
Normal
0.2
494
Normal
0.2
944
Normal
0.2
912
Normal
0.2
982
Normal
0.2
964
Normal
0.2
923
Tumor
0.2
818
Normal
0.2
481
Tumor
0.2
477
Tumor
0.2
722
Normal
0.2
786
Normal
0.2
824
Normal
0.2
975
Tumor
0.2
416
Normal
0.2
474
Normal
0.2
966
Normal
0.2
937
Tumor
0.2
868
Normal
0.2
1013
Tumor
0.2
1041
Tumor
0.2
572
Normal
0.1
695
Tumor
0.1
1028
Normal
0.1
535
Tumor
0.1
861
Tumor
0.1
863
Tumor
0.1
462
Normal
0.1
488
Normal
0.1
1026
Normal
0.1
448
Normal
0.1
553
Tumor
0.1
738
Normal
0.1
533
Tumor
0.1
715
Tumor
0.1
364
Normal
0.1
356
Normal
0.1
926
Normal
0.1
878
Normal
0.1
778
Normal
0.1
862
Normal
0.1
1046
Normal
0.1
874
Normal
0.1
311
Tumor
0.1
558
Normal
0.1
482
Normal
0.1
327
Tumor
0.1
866
Normal
0.1
697
Tumor
0.1
211
Tumor
0.1
1043
Tumor
0.1
421
Tumor
0.1
365
Tumor
0.1
756
Normal
0.1
911
Tumor
0.1
224
Normal
0.1
515
Tumor
0.1
696
Normal
0.1
635
Tumor
0.1
412
Normal
0.1
983
Tumor
0.1
341
Tumor
0.1
534
Normal
0.1
977
Tumor
0.1
188
Normal
0.1
297
Tumor
0.1
228
Normal
0.1
127
Tumor
0.1
816
Normal
0.1
858
Normal
0.1
615
Tumor
0.1
881
Tumor
0.1
362
Normal
0.1
755
Tumor
0.1
1025
Tumor
0.0
363
Tumor
0.0
527
Tumor
0.0
355
Tumor
0.0
976
Normal
0.0
455
Tumor
0.0
665
Tumor
0.0
142
Normal
0.0
877
Tumor
0.0
867
Tumor
0.0
698
Normal
0.0
525
Tumor
0.0
554
Normal
0.0
284
Normal
0.0
744
Normal
0.0
864
Normal
0.0
1016
Normal
0.0
914
Normal
0.0
444
Normal
0.0
951
Tumor
0.0
221
Tumor
0.0
431
Tumor
0.0
376
Normal
0.0
185
Tumor
0.0
137
Tumor
0.0
141
Tumor
0.0
312
Normal
0.0
628
Normal
0.0
517
Tumor
0.0
361
Tumor
0.0
384
Normal
0.0
662
Normal
0.0
192
Normal
0.0
435
Tumor
0.0
368
Normal
0.0
433
Tumor
0.0
666
Normal
0.0
383
Tumor
-0.1
537
Tumor
-0.1
526
Normal
-0.1
953
Tumor
-0.1
568
Normal
-0.1
286
Normal
-0.1
436
Normal
-0.1
161
Tumor
-0.1
434
Normal
-0.1
664
Normal
-0.1
641
Tumor
-0.1
427
Tumor
-0.1
672
Normal
-0.1
465
Tumor
-0.1
573
Tumor
-0.1
814
Normal
-0.1
366
Normal
-0.1
618
Normal
-0.1
223
Tumor
-0.1
213
Tumor
-0.1
965
Tumor
-0.1
642
Normal
-0.1
112
Tumor
-0.1
557
Tumor
-0.1
146
Normal
-0.1
272
Normal
-0.1
386
Normal
-0.1
128
Normal
-0.1
523
Tumor
-0.1
422
Normal
-0.1
375
Tumor
-0.1
648
Normal
-0.1
111
Normal
-0.1
196
Normal
-0.1
663
Tumor
-0.1
271
Tumor
-0.1
278
Normal
-0.1
138
Normal
-0.1
344
Normal
-0.1
464
Normal
-0.1
217
Tumor
-0.1
367
Tumor
-0.1
352
Normal
-0.1
451
Tumor
-0.1
126
Normal
-0.1
162
Normal
-0.1
218
Normal
-0.1
491
Tumor
-0.1
136
Normal
-0.1
172
Normal
-0.2
447
Tumor
-0.2
135
Tumor
-0.2
332
Normal
-0.2
428
Normal
-0.2
564
Normal
-0.2
424
Normal
-0.2
445
Tumor
-0.2
268
Normal
-0.2
394
Normal
-0.2
187
Tumor
-0.2
343
Tumor
-0.2
298
Normal
-0.2
497
Tumor
-0.2
426
Normal
-0.2
395
Tumor
-0.2
396
Normal
-0.2
132
Normal
-0.2
314
Normal
-0.2
685
Tumor
-0.2
467
Tumor
-0.2
446
Normal
-0.2
727
Tumor
-0.2
148
Normal
-0.2
114
Normal
-0.2
432
Normal
-0.2
452
Normal
-0.2
358
Normal
-0.2
466
Normal
-0.2
391
Tumor
-0.2
331
Tumor
-0.2
385
Tumor
-0.2
191
Tumor
-0.2
423
Tumor
-0.2
227
Tumor
-0.2
262
Normal
-0.2
443
Tumor
-0.2
214
Normal
-0.2
342
Normal
-0.2
413
Tumor
-0.2
354
Normal
-0.2
392
Normal
-0.2
468
Normal
-0.2
258
Normal
-0.2
456
Normal
-0.2
277
Tumor
-0.2
411
Tumor
-0.2
388
Normal
-0.2
222
Normal
-0.2
627
Tumor
-0.2
745
Tumor
-0.2
145
Tumor
-0.2
414
Normal
-0.2
186
Normal
-0.2
261
Tumor
-0.2
125
Tumor
-0.3
195
Tumor
-0.3
232
Normal
-0.3
353
Tumor
-0.3
743
Tumor
-0.3
123
Tumor
-0.3
574
Normal
-0.3
113
Tumor
-0.3
636
Normal
-0.3
313
Tumor
-0.3
124
Normal
-0.4
813
Tumor
-0.4
393
Tumor
-0.4
131
Tumor
-0.4
425
Tumor
-0.4
567
Tumor
-0.5
661
Tumor
-0.5
267
Tumor
-0.6
387
Tumor
-0.6
351
Tumor
-0.6
571
Tumor
-0.7
357
Tumor
-0.7
231
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
