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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C5orf24 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
41.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
37.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
33.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
30.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
30.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
30.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
28.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
28.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
27.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
27.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
27.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
26.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
26.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
26.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
25.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
25.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
25.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
25.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
24.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
24.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
24.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
24.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
24.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
23.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
23.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
23.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
23.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
23.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
23.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
22.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
22.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
22.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
22.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
21.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
21.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
21.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
21.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
20.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
20.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
20.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
19.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
19.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
19.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
19.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
19.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
19.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
19.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
19.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
19.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
19.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
19.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
18.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
18.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
18.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
18.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
18.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
18.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
18.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
18.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
18.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
17.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
17.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
17.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
17.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
16.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
16.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
16.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
16.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
16.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
16.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
16.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
16.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
16.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
16.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
16.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
16.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
16.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
16.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
16.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
16.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
16.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
16.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
16.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
16.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
15.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
15.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
15.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
15.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
15.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
15.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
15.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
15.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
15.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
15.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
15.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
15.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
15.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
15.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
15.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
15.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
15.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
14.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
14.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
14.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
14.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
14.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
14.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
14.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
14.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
14.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
14.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
14.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
14.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
14.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
14.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
14.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
14.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
14.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
14.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
14.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
14.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
14.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
13.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
13.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
13.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
13.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
13.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
13.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
13.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
13.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
13.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
13.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
13.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
13.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
13.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
13.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
13.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
13.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
13.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
12.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
12.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
12.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
12.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
12.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
12.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
12.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
12.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
12.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
12.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
12.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
12.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
12.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
12.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
12.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
12.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
12.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
12.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
12.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
12.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
11.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
11.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
11.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
11.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
11.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
11.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
11.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
11.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
11.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
11.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
11.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
11.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
11.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
11.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
11.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
11.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
11.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
11.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
11.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
11.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
11.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
11.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
11.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
11.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
11.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
11.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
11.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
11.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
11.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
10.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
10.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
10.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
10.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
10.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
10.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
10.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
10.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
10.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
10.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
10.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
9.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
9.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
9.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
9.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
9.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
9.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
9.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
9.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
9.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
9.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
9.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
9.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
9.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
9.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
9.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
9.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
9.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
9.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
9.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
9.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
9.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
9.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
8.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
8.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
8.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
8.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
8.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
8.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
8.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
8.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
8.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
8.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
8.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
8.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
8.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
8.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
8.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
8.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
8.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
8.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
8.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
8.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
8.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
8.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
7.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
7.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
7.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
7.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
7.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
7.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
7.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
7.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
7.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
7.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
7.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
7.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
7.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
7.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
7.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
7.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
7.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
7.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
7.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
6.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
6.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
6.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
6.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
6.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
6.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
6.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
6.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
6.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
6.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
6.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
6.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
6.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
6.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
6.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
5.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
5.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
5.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
5.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
5.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
5.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
5.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
5.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
5.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
5.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
5.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
5.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
5.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
5.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
5.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
5.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
5.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
4.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
4.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
4.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
4.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
4.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
4.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
4.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
4.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
3.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C5orf24 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.9
Number of samples
231
Samples
Sample
Description
TPM
DO45099
0 years, male, NA, stage:3, alive, 1590 days
35.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
32.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
30.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
28.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
24.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
23.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
23.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
23.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
23.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
21.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
21.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
21.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
21.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
20.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
20.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
20.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
20.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
20.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
20.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
20.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
20.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
20.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
20.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
19.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
19.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
19.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
19.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
19.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
18.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
18.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
18.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
18.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
18.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
18.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
18.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
18.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
18.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
18.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
17.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
17.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
17.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
17.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
17.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
17.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
17.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
17.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
17.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
17.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
17.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
16.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
16.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
16.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
16.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
16.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
16.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
16.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
16.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
16.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
16.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
16.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
15.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
15.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
15.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
15.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
15.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
15.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
15.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
15.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
15.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
15.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
15.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
14.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
14.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
14.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
14.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
14.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
14.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
14.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
14.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
14.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
14.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
14.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
14.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
14.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
14.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
14.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
14.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
13.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
13.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
13.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
13.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
13.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
13.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
13.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
13.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
13.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
13.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
13.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
13.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
13.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
13.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
12.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
12.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
12.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
12.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
12.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
12.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
12.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
12.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
12.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
12.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
12.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
12.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
12.3
DO45249
0 years, male, NA, stage:1, alive, 630 days
12.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
12.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
12.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
12.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
12.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
12.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
12.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
12.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
12.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
11.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
11.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
11.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
11.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
11.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
11.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
11.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
11.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
11.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
11.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
11.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
11.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
11.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
11.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
11.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
11.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
10.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
10.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
10.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
10.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
10.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
10.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
10.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
10.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
10.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
10.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
10.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
10.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
10.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
10.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
10.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
9.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
9.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
9.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
9.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
9.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
9.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
9.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
9.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
9.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
9.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
9.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
9.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
9.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
9.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
9.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
9.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
9.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
9.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
9.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
8.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
8.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
8.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
8.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
8.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
8.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
8.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
8.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
8.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
8.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
8.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
8.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
8.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
8.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
8.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
8.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
8.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
7.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
7.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
7.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
7.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
7.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
7.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
7.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
7.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
7.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
7.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
7.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
7.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
7.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
6.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
6.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
6.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
6.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
6.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
6.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
6.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
5.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
5.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
5.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
5.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
4.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
4.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
3.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
3.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
1.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
865
Tumor
2.2
523
Tumor
1.9
663
Tumor
1.5
161
Tumor
1.5
1013
Tumor
1.4
965
Tumor
1.4
977
Tumor
1.4
131
Tumor
1.3
497
Tumor
1.3
487
Tumor
1.2
355
Tumor
1.2
743
Tumor
1.2
647
Tumor
1.2
877
Tumor
1.1
1025
Tumor
1.1
425
Tumor
1.1
921
Tumor
1.1
473
Tumor
1.1
123
Tumor
1.1
515
Tumor
1.0
695
Tumor
1.0
431
Tumor
1.0
823
Tumor
1.0
635
Tumor
1.0
737
Tumor
1.0
881
Tumor
0.9
883
Tumor
0.9
1041
Tumor
0.9
715
Tumor
0.9
863
Tumor
0.9
467
Tumor
0.9
493
Tumor
0.8
1031
Tumor
0.8
923
Tumor
0.8
963
Tumor
0.8
937
Tumor
0.8
517
Tumor
0.8
1021
Tumor
0.7
557
Tumor
0.7
925
Tumor
0.7
411
Tumor
0.7
527
Tumor
0.7
911
Tumor
0.6
913
Tumor
0.6
975
Tumor
0.6
918
Normal
0.6
915
Tumor
0.6
685
Tumor
0.6
912
Normal
0.6
357
Tumor
0.6
1043
Tumor
0.6
955
Tumor
0.5
777
Tumor
0.5
873
Tumor
0.5
967
Tumor
0.5
917
Tumor
0.5
477
Tumor
0.5
112
Tumor
0.5
951
Tumor
0.5
984
Normal
0.5
916
Normal
0.5
465
Tumor
0.5
341
Tumor
0.5
461
Tumor
0.5
483
Tumor
0.5
884
Normal
0.5
627
Tumor
0.4
615
Tumor
0.4
957
Tumor
0.4
721
Tumor
0.4
878
Normal
0.4
351
Tumor
0.4
617
Tumor
0.4
533
Tumor
0.4
926
Normal
0.4
813
Tumor
0.4
665
Tumor
0.4
922
Normal
0.4
814
Normal
0.4
641
Tumor
0.4
455
Tumor
0.4
778
Normal
0.4
553
Tumor
0.4
924
Normal
0.4
1014
Normal
0.4
267
Tumor
0.4
943
Tumor
0.4
983
Tumor
0.4
481
Tumor
0.4
744
Normal
0.4
447
Tumor
0.3
285
Tumor
0.3
817
Tumor
0.3
953
Tumor
0.3
383
Tumor
0.3
727
Tumor
0.3
484
Normal
0.3
443
Tumor
0.3
1032
Normal
0.3
415
Tumor
0.3
1045
Tumor
0.3
141
Tumor
0.3
127
Tumor
0.3
491
Tumor
0.3
714
Normal
0.3
433
Tumor
0.3
857
Tumor
0.3
471
Tumor
0.2
882
Normal
0.2
361
Tumor
0.2
952
Normal
0.2
958
Normal
0.2
353
Tumor
0.2
211
Tumor
0.2
518
Normal
0.2
498
Normal
0.2
513
Tumor
0.2
867
Tumor
0.2
492
Normal
0.2
968
Normal
0.2
1046
Normal
0.2
427
Tumor
0.2
524
Normal
0.2
818
Normal
0.2
435
Tumor
0.2
191
Tumor
0.2
824
Normal
0.2
545
Tumor
0.2
365
Tumor
0.2
563
Tumor
0.2
413
Tumor
0.2
954
Normal
0.2
716
Normal
0.2
864
Normal
0.2
526
Normal
0.2
217
Tumor
0.1
861
Tumor
0.1
482
Normal
0.1
536
Normal
0.1
978
Normal
0.1
525
Tumor
0.1
171
Tumor
0.1
261
Tumor
0.1
221
Tumor
0.1
786
Normal
0.1
428
Normal
0.1
1022
Normal
0.1
785
Tumor
0.1
862
Normal
0.1
1016
Normal
0.1
938
Normal
0.1
213
Tumor
0.1
472
Normal
0.1
696
Normal
0.1
858
Normal
0.1
195
Tumor
0.1
966
Normal
0.1
868
Normal
0.1
746
Normal
0.1
463
Tumor
0.1
964
Normal
0.1
231
Tumor
0.1
866
Normal
0.1
537
Tumor
0.1
1042
Normal
0.1
535
Tumor
0.1
528
Normal
0.1
815
Tumor
0.1
223
Tumor
0.0
192
Normal
0.0
741
Tumor
0.0
514
Normal
0.0
412
Normal
0.0
852
Normal
0.0
554
Normal
0.0
421
Tumor
0.0
628
Normal
0.0
426
Normal
0.0
516
Normal
0.0
448
Normal
0.0
478
Normal
0.0
618
Normal
0.0
364
Normal
0.0
462
Normal
0.0
567
Tumor
0.0
328
Normal
0.0
724
Normal
0.0
384
Normal
0.0
446
Normal
0.0
474
Normal
0.0
436
Normal
0.0
642
Normal
0.0
672
Normal
0.0
534
Normal
0.0
451
Tumor
0.0
488
Normal
0.0
375
Tumor
0.0
271
Tumor
0.0
284
Normal
0.0
1026
Normal
0.0
1044
Normal
0.0
222
Normal
0.0
444
Normal
0.0
416
Normal
0.0
616
Normal
-0.1
914
Normal
-0.1
422
Normal
-0.1
424
Normal
-0.1
572
Normal
-0.1
546
Normal
-0.1
874
Normal
-0.1
697
Tumor
-0.1
1015
Tumor
-0.1
1028
Normal
-0.1
283
Tumor
-0.1
755
Tumor
-0.1
722
Normal
-0.1
698
Normal
-0.1
573
Tumor
-0.1
664
Normal
-0.1
538
Normal
-0.1
366
Normal
-0.1
113
Tumor
-0.1
135
Tumor
-0.1
367
Tumor
-0.1
944
Normal
-0.1
224
Normal
-0.1
494
Normal
-0.1
423
Tumor
-0.1
982
Normal
-0.1
414
Normal
-0.1
228
Normal
-0.1
218
Normal
-0.1
742
Normal
-0.1
816
Normal
-0.1
257
Tumor
-0.1
196
Normal
-0.1
327
Tumor
-0.1
756
Normal
-0.2
445
Tumor
-0.2
728
Normal
-0.2
368
Normal
-0.2
464
Normal
-0.2
376
Normal
-0.2
686
Normal
-0.2
662
Normal
-0.2
352
Normal
-0.2
981
Tumor
-0.2
432
Normal
-0.2
286
Normal
-0.2
648
Normal
-0.2
212
Normal
-0.2
362
Normal
-0.2
571
Tumor
-0.2
636
Normal
-0.2
137
Tumor
-0.3
354
Normal
-0.3
111
Normal
-0.3
564
Normal
-0.3
363
Tumor
-0.3
456
Normal
-0.3
976
Normal
-0.3
558
Normal
-0.3
568
Normal
-0.3
574
Normal
-0.3
147
Tumor
-0.3
851
Tumor
-0.3
466
Normal
-0.3
124
Normal
-0.3
723
Tumor
-0.3
187
Tumor
-0.3
666
Normal
-0.3
713
Tumor
-0.3
214
Normal
-0.4
671
Tumor
-0.4
356
Normal
-0.4
745
Tumor
-0.4
132
Normal
-0.4
268
Normal
-0.4
272
Normal
-0.4
434
Normal
-0.4
344
Normal
-0.4
738
Normal
-0.4
661
Tumor
-0.4
114
Normal
-0.4
185
Tumor
-0.4
358
Normal
-0.4
128
Normal
-0.4
956
Normal
-0.4
468
Normal
-0.4
258
Normal
-0.4
232
Normal
-0.4
343
Tumor
-0.4
452
Normal
-0.5
142
Normal
-0.5
262
Normal
-0.5
186
Normal
-0.5
342
Normal
-0.5
162
Normal
-0.5
1027
Tumor
-0.5
125
Tumor
-0.6
136
Normal
-0.6
227
Tumor
-0.6
188
Normal
-0.6
138
Normal
-0.7
145
Tumor
-0.7
146
Normal
-0.8
148
Normal
-0.8
126
Normal
-0.8
172
Normal
-0.9
385
Tumor
N/A
386
Normal
N/A
387
Tumor
N/A
388
Normal
N/A
391
Tumor
N/A
392
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
278
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
311
Tumor
N/A
312
Normal
N/A
313
Tumor
N/A
314
Normal
N/A
331
Tumor
N/A
332
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
