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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
7.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
7.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
6.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
2.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
2.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
1.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
1.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM252 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
394.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
355.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
266.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
181.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
156.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
148.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
111.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
92.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
85.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
79.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
79.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
78.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
78.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
74.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
60.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
57.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
57.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
57.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
55.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
55.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
54.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
54.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
53.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
50.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
49.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
47.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
44.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
44.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
43.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
43.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
43.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
42.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
41.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
40.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
40.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
40.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
40.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
39.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
39.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
38.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
38.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
37.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
37.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
36.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
36.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
36.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
36.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
34.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
34.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
33.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
33.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
33.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
32.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
32.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
32.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
31.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
31.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
30.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
30.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
30.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
30.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
30.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
30.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
29.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
29.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
29.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
29.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
28.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
28.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
28.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
28.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
27.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
27.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
27.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
27.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
26.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
26.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
26.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
26.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
25.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
25.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
25.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
25.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
25.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
24.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
24.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
24.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
23.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
23.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
23.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
23.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
23.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
22.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
22.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
22.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
22.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
22.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
22.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
22.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
22.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
22.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
21.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
21.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
21.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
21.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
21.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
20.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
20.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
20.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
20.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
20.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
19.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
19.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
19.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
18.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
18.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
18.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
18.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
18.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
18.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
18.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
17.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
17.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
17.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
17.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
17.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
16.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
16.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
16.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
16.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
15.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
15.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
15.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
15.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
15.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
15.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
15.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
15.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
15.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
14.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
14.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
14.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
14.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
14.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
14.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
14.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
14.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
14.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
14.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
13.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
13.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
13.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
13.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
13.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
13.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
12.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
12.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
12.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
12.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
12.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
11.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
11.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
11.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
11.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
11.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
11.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
11.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
11.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
11.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
10.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
10.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
10.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
10.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
10.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
10.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
10.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
10.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
10.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
10.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
10.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
10.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
10.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
9.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
9.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
9.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
9.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
9.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
9.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
9.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
8.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
8.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
8.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
8.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
8.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
8.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
8.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
8.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
8.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
8.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
7.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
7.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
7.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
7.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
7.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
7.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
7.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
7.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
7.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
7.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
7.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
7.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
7.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
7.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
6.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
6.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
6.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
6.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
6.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
6.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
6.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
6.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
6.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
6.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
6.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
6.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
6.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
6.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
6.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
6.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
5.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
5.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
5.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
5.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
5.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
5.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
5.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
5.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
5.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
5.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
5.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
5.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
5.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
5.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
5.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
5.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
5.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
5.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
5.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
5.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
5.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
5.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
5.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
5.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
5.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
4.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
4.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
4.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
4.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
4.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
4.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
4.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
4.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
4.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
4.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
4.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
4.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
4.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
4.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
4.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
4.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
4.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
4.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
4.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
4.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
4.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
4.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
4.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
4.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
4.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
4.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
4.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
4.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
4.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
4.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
4.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
4.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
4.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
4.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
4.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
4.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
4.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
3.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
3.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
3.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
3.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
3.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
3.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
3.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
3.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
3.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
3.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
3.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
3.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
3.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
3.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
3.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
3.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
3.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
3.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
3.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
3.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
3.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
3.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
3.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
3.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
3.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
3.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
3.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
2.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
2.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
2.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
2.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
2.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
2.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
2.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
2.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
2.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
2.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
2.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
2.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
2.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
2.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
2.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
2.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
2.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
2.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
2.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
2.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
2.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
2.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
2.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
2.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
2.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
2.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
2.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
2.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
2.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
2.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
1.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
1.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
1.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
1.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
1.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
1.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
1.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
1.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
1.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
1.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
1.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
1.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
1.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
1.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
1.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
1.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
1.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
1.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
1.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
1.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
1.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
1.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
1.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
1.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
1.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
1.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
1.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
1.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
1.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
1.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
1.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
1.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
1.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
1.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
1.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
1.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
1.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
1.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
1.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
1.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
1.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
1.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
0.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
0.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
0.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
0.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
0.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
0.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
0.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
0.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
0.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
0.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
0.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
0.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
0.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
0.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
0.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
0.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
0.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
0.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
0.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
0.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
0.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
0.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
0.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
0.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
0.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
0.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
0.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
0.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
0.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
0.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
0.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
0.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
0.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
0.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
0.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
0.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
0.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
0.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
0.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
0.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
0.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
0.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
0.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
0.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
0.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
0.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM252 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
131.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
77.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
66.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
62.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
49.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
49.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
46.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
46.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
45.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
44.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
41.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
39.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
39.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
38.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
38.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
35.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
35.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
34.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
31.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
31.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
31.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
29.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
28.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
25.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
25.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
24.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
24.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
23.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
21.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
20.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
20.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
20.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
19.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
17.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
17.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
16.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
15.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
14.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
12.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
10.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
8.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
8.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
7.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
7.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
7.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
6.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
6.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
6.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
5.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
5.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
5.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
5.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
5.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
4.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
4.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
4.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
4.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
3.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
3.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
3.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
3.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
3.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
3.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
3.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
3.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
2.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
2.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
2.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
2.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
2.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
2.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
2.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
1.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
1.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
1.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
1.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
1.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
1.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
1.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
1.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
1.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
1.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
0.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
0.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
0.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
0.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
0.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
0.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
0.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM252 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
112.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
2527.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
1079.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
1048.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
945.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
906.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
902.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
732.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
697.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
676.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
625.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
622.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
590.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
537.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
489.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
461.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
450.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
448.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
428.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
427.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
417.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
365.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
361.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
358.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
342.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
309.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
308.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
298.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
288.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
272.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
270.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
266.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
263.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
258.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
257.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
239.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
224.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
224.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
224.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
223.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
221.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
207.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
198.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
196.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
189.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
184.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
176.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
174.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
174.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
167.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
155.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
148.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
146.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
143.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
139.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
139.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
138.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
138.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
137.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
137.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
135.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
134.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
134.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
126.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
125.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
123.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
122.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
119.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
116.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
115.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
114.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
112.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
111.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
110.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
109.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
108.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
106.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
102.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
99.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
97.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
96.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
95.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
93.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
91.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
89.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
87.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
84.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
79.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
79.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
75.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
75.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
75.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
75.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
69.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
68.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
67.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
66.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
66.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
66.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
66.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
66.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
65.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
65.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
65.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
64.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
63.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
62.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
61.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
61.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
60.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
60.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
59.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
58.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
57.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
57.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
56.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
56.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
55.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
55.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
53.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
53.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
53.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
52.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
49.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
48.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
48.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
47.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
46.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
44.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
44.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
44.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
43.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
43.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
42.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
42.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
41.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
40.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
40.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
40.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
40.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
39.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
39.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
38.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
38.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
38.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
37.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
37.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
36.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
36.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
35.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
35.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
35.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
34.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
33.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
32.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
32.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
32.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
32.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
32.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
32.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
31.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
31.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
30.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
29.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
29.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
29.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
29.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
27.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
27.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
27.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
27.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
27.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
26.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
26.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
26.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
26.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
24.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
23.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
22.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
21.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
20.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
19.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
19.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
19.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
18.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
17.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
17.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
16.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
16.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
16.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
14.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
13.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
13.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
12.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
11.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
10.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
10.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
10.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
10.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
10.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
9.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
9.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
7.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
7.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
6.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
6.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
6.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
6.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
5.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
5.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
4.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
4.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
4.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
4.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
4.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
4.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
4.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
3.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
3.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
3.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
2.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
2.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
2.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
2.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
2.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
2.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
2.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
1.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
1.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
1.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
1.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
1.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
0.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
0.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
0.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
0.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
0.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
0.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.