HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:10.3 nTPM
HPA Brain:21.2 nTPM
GTEx:10.3 nTPM
FANTOM5:26.3 Scaled Tags Per Million
Pig:29.9 nTPM
Mouse:20.6 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003720
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 21.2
Sample id Sample description nTPM
Hippocampus
nTPM: 20.5
1855 Male, age 76, left hemisphere 23.1
1898 Male, age 80, left hemisphere 23.0
1911 Female, age 85, right hemisphere 19.9
2529 Female, age 94, left hemisphere 19.7
2148 Female, age 91, left hemisphere 19.2
2621 Female, age 67, right hemisphere 18.2
Dentate gyrus
nTPM: 19.6
2010 Male, age 76, both hemispheres 21.9
2528 Male, age 74, both hemispheres 20.8
2530 Female, age 94, left hemisphere 20.6
2246 Female, age 85, both hemispheres 19.4
1927 Female, age 91, both hemispheres 19.3
2531 Female, age 67, both hemispheres 15.8
Entorhinal gyrus
nTPM: 19.0
2117 Female, age 91, right hemisphere 23.1
1938 Female, age 85, left hemisphere 21.2
2764 Male, age 80, right hemisphere 18.3
1787 Male, age 76, left hemisphere 18.1
2686 Male, age 75, right hemisphere 17.8
2613 Female, age 94, left hemisphere 15.8
Hippocampus, CA1
nTPM: 21.2
2749 Male, age 80, left hemisphere 22.2
1873 Female, age 85, both hemispheres 22.1
2045 Male, age 76, both hemispheres 21.6
2527 Male, age 74, both hemispheres 21.1
2082 Female, age 91, right hemisphere 19.0
Hippocampus, CA2
nTPM: 19.7
1963 Male, age 80, left hemisphere 20.8
2113 Female, age 91, right hemisphere 20.7
1892 Male, age 76, both hemispheres 19.7
2249 Male, age 74, both hemispheres 19.7
1940 Female, age 85, left hemisphere 18.7
2437 Female, age 94, left hemisphere 18.5
Hippocampus, CA3
nTPM: 19.4
1891 Female, age 85, both hemispheres 21.0
2436 Male, age 74, both hemispheres 20.7
2137 Male, age 80, left hemisphere 19.2
1867 Male, age 76, both hemispheres 18.9
2861 Female, age 67, both hemispheres 18.8
2620 Female, age 94, left hemisphere 17.7
Parahippocampal cortex
nTPM: 19.7
1850 Male, age 80, both hemispheres 22.4
2250 Female, age 67, right hemisphere 21.6
2692 Male, age 74, both hemispheres 21.0
1933 Female, age 85, both hemispheres 20.6
2693 Female, age 94, both hemispheres 20.2
1990 Female, age 91, right hemisphere 19.3
2245 Female, age 91, both hemispheres 19.2
2018 Male, age 76, both hemispheres 19.1
2622 Female, age 67, right hemisphere 16.8
2532 Female, age 72, left hemisphere 16.3
Perirhinal gyrus
nTPM: 20.2
1794 Male, age 80, right hemisphere 21.7
2521 Female, age 94, right hemisphere 20.7
1841 Female, age 85, right hemisphere 19.8
1847 Female, age 91, left hemisphere 19.8
2848 Male, age 76, right hemisphere 19.2
Subiculum
nTPM: 19.7
2042 Male, age 76, both hemispheres 21.6
2729 Female, age 91, right hemisphere 20.9
1901 Male, age 80, both hemispheres 20.2
2619 Male, age 74, both hemispheres 20.0
1977 Female, age 85, both hemispheres 19.9
2438 Female, age 94, left hemisphere 15.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.3
Samples: 197

Max nTPM: 15.2
Min nTPM: 5.0
Std nTPM: 1.6
Median nTPM: 10.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 15.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 14.4
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 14.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 14.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 13.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 13.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 13.4
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 13.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 13.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 13.1
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 13.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 26.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.3
FF:10153-102I9 76 years, female 26.6
FF:10169-103B7 60 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 29.9
Pig sample Sample description nTPM
Subiculum
nTPM: 28.6
Samples: 4

Max nTPM: 33.0
Min nTPM: 26.7
Sample A Female 33.0
Sample B Female 27.9
Sample C Male 26.9
Sample D Male 26.7
Dorsal hippocampus
nTPM: 29.9
Samples: 4

Max nTPM: 33.4
Min nTPM: 25.7
Sample A Female 33.4
Sample B Female 30.7
Sample C Male 29.8
Sample D Male 25.7
Entorhinal cortex
nTPM: 27.6
Samples: 4

Max nTPM: 29.0
Min nTPM: 24.9
Sample A Female 27.6
Sample B Female 29.0
Sample C Male 28.9
Sample D Male 24.9
Ventral hippocampus
nTPM: 28.2
Samples: 4

Max nTPM: 30.7
Min nTPM: 26.0
Sample A Female 30.7
Sample B Female 26.0
Sample C Male 26.4
Sample D Male 29.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 20.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 22.1
Min nTPM: 16.7
Sample A Male 19.3
Sample B Male 19.8
Sample C Female 16.7
Sample D Female 22.1
Hippocampal formation
nTPM: 20.6
Samples: 4

Max nTPM: 22.4
Min nTPM: 17.1
Sample A Male 17.1
Sample B Male 21.4
Sample C Female 22.4
Sample D Female 21.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68797691 Antisense, RP_050210_02_H12, Mouse strain C57BL/6J (56 days, male) 0.4

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