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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
67.2
nTPM
FANTOM5:
50.9
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
67.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 59.9
2301
Female, age 85, both hemispheres
62.1
1984
Male, age 76, both hemispheres
61.8
2090
Male, age 80, both hemispheres
58.7
2188
Female, age 91, both hemispheres
57.1
Dorsal cochlear nucleus nTPM: 59.1
2058
Male, age 76, both hemispheres
67.5
2378
Male, age 80, both hemispheres
60.2
2370
Male, age 61, both hemispheres
60.0
2187
Female, age 91, both hemispheres
54.9
2802
Male, age 74, right hemisphere
52.8
Dorsal tegmental nucleus nTPM: 55.4
1936
Male, age 76, left hemisphere
62.2
2326
Male, age 74, both hemispheres
54.8
2358
Male, age 61, both hemispheres
52.8
2083
Male, age 80, both hemispheres
51.7
Dorsolateral tegmental area nTPM: 59.4
2141
Male, age 76, both hemispheres
70.0
2360
Male, age 74, both hemispheres
63.3
2337
Male, age 61, both hemispheres
57.7
2751
Female, age 85, both hemispheres
57.3
2654
Male, age 80, both hemispheres
48.9
Kolliker-Fuse nucleus nTPM: 59.2
2315
Male, age 76, right hemisphere
62.0
2793
Female, age 91, left hemisphere
59.6
2163
Male, age 80, both hemispheres
56.0
Lateral lemniscal nuclei nTPM: 62.2
2320
Female, age 91, left hemisphere
72.4
2169
Male, age 76, both hemispheres
60.8
2746
Female, age 85, left hemisphere
60.7
2036
Male, age 80, both hemispheres
59.0
2453
Male, age 74, right hemisphere
58.1
Lateral parabrachial nucleus nTPM: 60.0
2790
Male, age 61, both hemispheres
64.5
2792
Male, age 76, both hemispheres
63.6
2139
Female, age 85, right hemisphere
58.1
2013
Male, age 80, both hemispheres
53.6
Lateral vestibular nucleus nTPM: 60.8
2184
Male, age 76, both hemispheres
65.2
2311
Male, age 80, both hemispheres
56.4
Locus coeruleus nTPM: 60.3
2162
Male, age 80, both hemispheres
65.8
2788
Male, age 74, unknown
64.3
1980
Male, age 76, both hemispheres
63.8
2317
Female, age 72, unknown
59.8
2014
Male, age 55, unknown
59.0
2720
Male, age 74, both hemispheres
56.7
2123
Female, age 91, both hemispheres
52.3
Medial parabrachial nucleus nTPM: 58.6
2786
Male, age 76, both hemispheres
68.5
2156
Male, age 61, both hemispheres
60.1
2463
Female, age 85, right hemisphere
57.5
2854
Male, age 80, both hemispheres
54.3
2170
Female, age 91, both hemispheres
52.5
Medial periolivary nuclei nTPM: 62.1
2458
Female, age 91, both hemispheres
71.0
2081
Male, age 80, both hemispheres
63.6
2171
Female, age 85, both hemispheres
60.8
2791
Male, age 74, right hemisphere
58.8
2063
Male, age 76, both hemispheres
56.4
Motor facial nucleus nTPM: 59.6
2327
Male, age 80, both hemispheres
73.0
2126
Male, age 61, both hemispheres
66.2
2697
Female, age 85, both hemispheres
59.0
2795
Female, age 91, both hemispheres
56.6
2365
Male, age 74, right hemisphere
52.4
2062
Male, age 76, both hemispheres
50.3
Motor trigeminal nucleus nTPM: 67.2
2309
Male, age 76, both hemispheres
73.9
2321
Female, age 91, both hemispheres
73.6
2079
Male, age 80, both hemispheres
64.9
2335
Male, age 61, both hemispheres
63.6
2560
Male, age 74, both hemispheres
59.7
Nuclei of the trapezoid body nTPM: 62.6
2166
Male, age 80, both hemispheres
67.9
2368
Female, age 91, both hemispheres
66.4
2735
Female, age 85, both hemispheres
65.9
2159
Male, age 61, both hemispheres
61.5
1983
Male, age 76, both hemispheres
51.2
Nucleus raphe magnus nTPM: 59.5
2328
Male, age 80, both hemispheres
68.6
2172
Female, age 85, both hemispheres
64.8
2459
Female, age 91, both hemispheres
62.8
2160
Male, age 61, both hemispheres
55.9
2455
Male, age 74, both hemispheres
53.0
2051
Male, age 76, both hemispheres
51.8
Paramedian reticular nucleus nTPM: 55.8
2052
Male, age 76, both hemispheres
58.3
2313
Male, age 61, both hemispheres
55.1
2057
Male, age 80, both hemispheres
55.0
2050
Female, age 85, both hemispheres
54.7
Pedunculopontine tegmental nucleus nTPM: 57.9
1921
Female, age 85, both hemispheres
59.7
2338
Male, age 61, both hemispheres
57.7
2334
Male, age 80, both hemispheres
56.3
Pontine nuclei nTPM: 58.2
2115
Male, age 80, left hemisphere
66.1
2454
Male, age 74, left hemisphere
64.4
2727
Male, age 61, right hemisphere
62.4
2319
Female, age 91, both hemispheres
60.5
1968
Male, age 76, left hemisphere
54.6
2109
Female, age 72, unknown
53.9
2787
Female, age 85, both hemispheres
52.7
1863
Male, age 55, unknown
50.9
Pontine raphe nucleus nTPM: 62.6
2853
Male, age 76, midline
64.3
2122
Female, age 85, midline
60.8
Posteroventral cochlear nucleus nTPM: 61.1
2070
Male, age 76, both hemispheres
69.7
2371
Male, age 61, both hemispheres
64.5
2135
Female, age 91, both hemispheres
59.6
2752
Female, age 85, both hemispheres
59.0
2341
Male, age 80, both hemispheres
52.5
Principal sensory trigeminal nucleus nTPM: 62.8
2324
Male, age 76, both hemispheres
65.6
2158
Male, age 61, both hemispheres
64.5
2008
Male, age 80, left hemisphere
61.0
2367
Female, age 91, left hemisphere
60.0
Reticular pontine nucleus, caudal nTPM: 62.9
2332
Male, age 80, right hemisphere
71.7
2559
Male, age 74, both hemispheres
63.0
2092
Male, age 76, both hemispheres
60.9
2457
Female, age 91, both hemispheres
56.2
Reticular pontine nucleus, oral nTPM: 58.3
2366
Female, age 91, both hemispheres
65.8
2167
Male, age 76, both hemispheres
64.6
2012
Female, age 85, both hemispheres
57.7
1939
Male, age 80, both hemispheres
51.9
2361
Male, age 74, both hemispheres
51.7
Reticulotegmental nucleus nTPM: 60.1
2452
Male, age 74, both hemispheres
60.7
2325
Male, age 76, both hemispheres
60.6
2322
Female, age 91, both hemispheres
59.8
2333
Male, age 80, both hemispheres
59.3
Spinal trigeminal nucleus, oral nTPM: 59.6
1978
Male, age 76, both hemispheres
64.4
2737
Female, age 85, both hemispheres
59.2
2164
Male, age 80, both hemispheres
55.3
Subcoeruleus area nTPM: 59.9
2089
Male, age 76, left hemisphere
67.3
2451
Male, age 74, both hemispheres
60.4
2369
Female, age 85, left hemisphere
59.5
2323
Female, age 91, left hemisphere
59.2
1958
Male, age 80, both hemispheres
52.9
Superior olive nTPM: 59.8
2561
Female, age 91, both hemispheres
71.6
2329
Male, age 80, right hemisphere
71.1
2020
Male, age 76, both hemispheres
53.3
2364
Male, age 74, right hemisphere
52.4
1875
Female, age 85, both hemispheres
50.7
Ventral periolivary nuclei nTPM: 64.3
2794
Female, age 91, left hemisphere
72.1
2130
Female, age 85, both hemispheres
66.7
2165
Male, age 80, both hemispheres
62.5
2023
Male, age 76, both hemispheres
55.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 58.9
2456
Female, age 91, both hemispheres
65.0
2449
Male, age 74, both hemispheres
63.0
2161
Male, age 80, both hemispheres
57.3
1959
Male, age 76, both hemispheres
56.9
2359
Male, age 61, both hemispheres
55.7
2840
Female, age 85, both hemispheres
55.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
