HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:7.8 nTPM
HPA Brain:30.0 nTPM
GTEx:7.8 nTPM
FANTOM5:14.7 Scaled Tags Per Million
Pig:3.3 nTPM
Mouse:12.0 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020272
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 30.0
Sample id Sample description nTPM
Hippocampus
nTPM: 27.4
2148 Female, age 91, left hemisphere 32.6
2621 Female, age 67, right hemisphere 30.3
2529 Female, age 94, left hemisphere 26.6
1911 Female, age 85, right hemisphere 26.5
1855 Male, age 76, left hemisphere 25.5
1898 Male, age 80, left hemisphere 23.0
Dentate gyrus
nTPM: 27.9
2531 Female, age 67, both hemispheres 32.9
1927 Female, age 91, both hemispheres 29.1
2246 Female, age 85, both hemispheres 28.2
2530 Female, age 94, left hemisphere 27.3
2528 Male, age 74, both hemispheres 25.9
2010 Male, age 76, both hemispheres 23.7
Entorhinal gyrus
nTPM: 25.2
2613 Female, age 94, left hemisphere 27.1
2764 Male, age 80, right hemisphere 26.4
1787 Male, age 76, left hemisphere 25.9
2686 Male, age 75, right hemisphere 24.6
1938 Female, age 85, left hemisphere 23.7
2117 Female, age 91, right hemisphere 23.5
Hippocampus, CA1
nTPM: 26.8
2749 Male, age 80, left hemisphere 28.3
2045 Male, age 76, both hemispheres 28.0
1873 Female, age 85, both hemispheres 27.5
2527 Male, age 74, both hemispheres 25.2
2082 Female, age 91, right hemisphere 25.1
Hippocampus, CA2
nTPM: 25.0
1940 Female, age 85, left hemisphere 27.1
1892 Male, age 76, both hemispheres 25.7
1963 Male, age 80, left hemisphere 25.3
2113 Female, age 91, right hemisphere 24.6
2437 Female, age 94, left hemisphere 24.6
2249 Male, age 74, both hemispheres 22.6
Hippocampus, CA3
nTPM: 30.0
2620 Female, age 94, left hemisphere 46.4
2861 Female, age 67, both hemispheres 37.0
2137 Male, age 80, left hemisphere 27.2
1867 Male, age 76, both hemispheres 24.1
1891 Female, age 85, both hemispheres 23.7
2436 Male, age 74, both hemispheres 21.8
Parahippocampal cortex
nTPM: 24.8
2245 Female, age 91, both hemispheres 29.1
2622 Female, age 67, right hemisphere 27.3
2532 Female, age 72, left hemisphere 25.7
2692 Male, age 74, both hemispheres 25.5
2693 Female, age 94, both hemispheres 25.5
2250 Female, age 67, right hemisphere 24.6
1990 Female, age 91, right hemisphere 23.5
1933 Female, age 85, both hemispheres 23.3
1850 Male, age 80, both hemispheres 22.0
2018 Male, age 76, both hemispheres 21.9
Perirhinal gyrus
nTPM: 22.9
1794 Male, age 80, right hemisphere 24.4
2521 Female, age 94, right hemisphere 23.0
1841 Female, age 85, right hemisphere 22.7
1847 Female, age 91, left hemisphere 22.4
2848 Male, age 76, right hemisphere 22.1
Subiculum
nTPM: 24.2
2438 Female, age 94, left hemisphere 25.7
2729 Female, age 91, right hemisphere 25.7
2619 Male, age 74, both hemispheres 24.4
1977 Female, age 85, both hemispheres 23.4
2042 Male, age 76, both hemispheres 23.2
1901 Male, age 80, both hemispheres 22.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 7.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.8
Samples: 197

Max nTPM: 13.8
Min nTPM: 4.2
Std nTPM: 1.7
Median nTPM: 7.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 13.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 12.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 12.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 12.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 12.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 11.9
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 11.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 11.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 11.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 11.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 10.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 14.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.7
FF:10153-102I9 76 years, female 19.0
FF:10169-103B7 60 years, female 10.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 3.3
Pig sample Sample description nTPM
Subiculum
nTPM: 3.0
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.8
Sample A Female 2.8
Sample B Female 3.4
Sample C Male 3.1
Sample D Male 2.8
Dorsal hippocampus
nTPM: 2.9
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.2
Sample A Female 2.2
Sample B Female 3.2
Sample C Male 2.7
Sample D Male 3.4
Entorhinal cortex
nTPM: 3.3
Samples: 4

Max nTPM: 3.8
Min nTPM: 3.0
Sample A Female 3.2
Sample B Female 3.3
Sample C Male 3.0
Sample D Male 3.8
Ventral hippocampus
nTPM: 3.2
Samples: 4

Max nTPM: 3.6
Min nTPM: 2.9
Sample A Female 3.0
Sample B Female 2.9
Sample C Male 3.6
Sample D Male 3.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 12.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 12.3
Min nTPM: 11.5
Sample A Male 12.1
Sample B Male 12.2
Sample C Female 11.5
Sample D Female 12.3
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 13.2
Min nTPM: 10.2
Sample A Male 11.1
Sample B Male 13.2
Sample C Female 12.5
Sample D Female 10.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70795712 Antisense, RP_050712_01_G12, Mouse strain C57BL/6J (56 days, male) 0.6
70608427 Antisense, RP_050630_01_B12, Mouse strain C57BL/6J (56 days, male) 0.0

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