HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:40.2 nTPM
HPA Brain:45.8 nTPM
GTEx:40.2 nTPM
FANTOM5:47.7 Scaled Tags Per Million
Pig:65.4 nTPM
Mouse:162.0 nTPM
Allen mouse:21.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000595
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 45.8
Sample id Sample description nTPM
Hippocampus
nTPM: 30.4
1898 Male, age 80, left hemisphere 40.3
2529 Female, age 94, left hemisphere 30.2
1855 Male, age 76, left hemisphere 29.5
2621 Female, age 67, right hemisphere 29.5
2148 Female, age 91, left hemisphere 27.3
1911 Female, age 85, right hemisphere 25.5
Dentate gyrus
nTPM: 32.0
2531 Female, age 67, both hemispheres 36.3
1927 Female, age 91, both hemispheres 34.8
2246 Female, age 85, both hemispheres 34.6
2528 Male, age 74, both hemispheres 31.8
2010 Male, age 76, both hemispheres 30.9
2530 Female, age 94, left hemisphere 23.6
Entorhinal gyrus
nTPM: 34.6
2764 Male, age 80, right hemisphere 44.3
1938 Female, age 85, left hemisphere 36.4
1787 Male, age 76, left hemisphere 34.8
2613 Female, age 94, left hemisphere 34.8
2117 Female, age 91, right hemisphere 29.2
2686 Male, age 75, right hemisphere 27.9
Hippocampus, CA1
nTPM: 37.4
2749 Male, age 80, left hemisphere 48.6
2045 Male, age 76, both hemispheres 37.7
2082 Female, age 91, right hemisphere 34.3
2527 Male, age 74, both hemispheres 33.3
1873 Female, age 85, both hemispheres 33.0
Hippocampus, CA2
nTPM: 31.5
1892 Male, age 76, both hemispheres 39.4
1963 Male, age 80, left hemisphere 33.6
2249 Male, age 74, both hemispheres 32.5
2113 Female, age 91, right hemisphere 30.6
1940 Female, age 85, left hemisphere 26.6
2437 Female, age 94, left hemisphere 26.6
Hippocampus, CA3
nTPM: 34.0
2137 Male, age 80, left hemisphere 42.9
1867 Male, age 76, both hemispheres 38.5
2620 Female, age 94, left hemisphere 36.3
1891 Female, age 85, both hemispheres 29.7
2861 Female, age 67, both hemispheres 28.7
2436 Male, age 74, both hemispheres 27.9
Parahippocampal cortex
nTPM: 34.8
1850 Male, age 80, both hemispheres 44.0
2245 Female, age 91, both hemispheres 40.4
2250 Female, age 67, right hemisphere 38.1
1933 Female, age 85, both hemispheres 37.1
2532 Female, age 72, left hemisphere 36.7
1990 Female, age 91, right hemisphere 35.0
2018 Male, age 76, both hemispheres 33.2
2693 Female, age 94, both hemispheres 33.1
2622 Female, age 67, right hemisphere 26.6
2692 Male, age 74, both hemispheres 24.0
Perirhinal gyrus
nTPM: 45.8
1847 Female, age 91, left hemisphere 52.6
1794 Male, age 80, right hemisphere 50.9
2521 Female, age 94, right hemisphere 43.6
1841 Female, age 85, right hemisphere 42.6
2848 Male, age 76, right hemisphere 39.5
Subiculum
nTPM: 32.4
1977 Female, age 85, both hemispheres 42.8
1901 Male, age 80, both hemispheres 34.6
2438 Female, age 94, left hemisphere 32.2
2042 Male, age 76, both hemispheres 29.3
2619 Male, age 74, both hemispheres 28.0
2729 Female, age 91, right hemisphere 27.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 40.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.2
Samples: 197

Max nTPM: 116.6
Min nTPM: 13.6
Std nTPM: 15.0
Median nTPM: 39.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 116.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 107.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 106.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 72.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 67.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 67.4
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 66.0
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 65.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 65.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 65.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 61.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 47.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.7
FF:10153-102I9 76 years, female 48.7
FF:10169-103B7 60 years, female 46.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 65.4
Pig sample Sample description nTPM
Subiculum
nTPM: 57.7
Samples: 4

Max nTPM: 75.3
Min nTPM: 43.8
Sample A Female 75.3
Sample B Female 52.7
Sample C Male 58.8
Sample D Male 43.8
Dorsal hippocampus
nTPM: 62.1
Samples: 4

Max nTPM: 71.3
Min nTPM: 54.7
Sample A Female 71.3
Sample B Female 67.3
Sample C Male 55.1
Sample D Male 54.7
Entorhinal cortex
nTPM: 49.1
Samples: 4

Max nTPM: 52.7
Min nTPM: 46.7
Sample A Female 52.7
Sample B Female 49.6
Sample C Male 47.3
Sample D Male 46.7
Ventral hippocampus
nTPM: 65.4
Samples: 4

Max nTPM: 77.0
Min nTPM: 50.4
Sample A Female 69.4
Sample B Female 50.4
Sample C Male 77.0
Sample D Male 64.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 162.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 162.0
Samples: 4

Max nTPM: 168.6
Min nTPM: 144.2
Sample A Male 144.2
Sample B Male 167.8
Sample C Female 167.4
Sample D Female 168.6
Hippocampal formation
nTPM: 160.7
Samples: 4

Max nTPM: 166.7
Min nTPM: 157.5
Sample A Male 166.7
Sample B Male 160.3
Sample C Female 157.5
Sample D Female 158.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 21.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.7
74581229 Antisense, RP_060215_02_G12, Mouse strain C57BL/6J (56 days, male) 21.7

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