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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCEAL8 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
166.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
143.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
131.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
129.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
128.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
125.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
124.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
123.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
118.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
115.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
109.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
106.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
98.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
97.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
96.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
91.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
89.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
88.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
88.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
86.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
85.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
79.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
78.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
78.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
77.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
76.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
75.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
75.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
74.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
74.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
74.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
73.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
73.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
70.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
70.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
70.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
67.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
66.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
66.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
63.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
63.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
62.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
61.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
61.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
61.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
61.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
60.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
60.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
60.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
60.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
59.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
58.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
57.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
56.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
56.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
55.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
55.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
54.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
53.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
53.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
53.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
52.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
52.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
52.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
52.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
52.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
52.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
51.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
51.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
50.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
50.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
50.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
49.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
49.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
48.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
48.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
48.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
48.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
47.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
47.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
47.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
46.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
45.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
45.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
44.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
44.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
43.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
43.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
43.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
43.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
43.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
42.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
42.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
42.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
41.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
41.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
41.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
40.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
40.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
40.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
40.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
39.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
39.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
39.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
39.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
39.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
38.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
38.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
38.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
38.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
37.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
37.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
36.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
36.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
36.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
36.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
36.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
36.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
36.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
34.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
34.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
34.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
34.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
34.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
34.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
33.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
33.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
33.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
33.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
33.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
33.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
33.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
32.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
32.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
32.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
32.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
32.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
32.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
32.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
31.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
31.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
30.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
30.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
29.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
29.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
29.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
29.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
29.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
29.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
29.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
28.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
28.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
28.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
28.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
27.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
27.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
27.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
27.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
27.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
27.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
26.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
26.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
26.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
26.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
26.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
26.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
25.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
25.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
25.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
25.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
25.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
25.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
25.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
24.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
24.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
24.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
24.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
24.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
24.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
23.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
22.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
22.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
22.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
22.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
21.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
21.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
21.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
21.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
21.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
21.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
21.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
21.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
21.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
21.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
20.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
20.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
20.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
20.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
20.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
20.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
20.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
20.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
20.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
20.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
19.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
19.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
19.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
18.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
18.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
18.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
18.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
18.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
18.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
18.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
18.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
18.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
17.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
17.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
16.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
16.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
16.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
16.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
15.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
15.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
15.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
15.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
15.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
15.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
15.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
15.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
15.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
15.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
15.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
15.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
15.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
15.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
14.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
14.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
14.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
14.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
14.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
14.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
14.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
14.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
13.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
13.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
13.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
13.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
13.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
13.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
13.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
13.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
13.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
13.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
13.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
12.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
12.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
12.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
12.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
12.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
12.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
11.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
11.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
11.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
11.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
11.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
11.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
10.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
10.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
10.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
10.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
9.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
9.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
9.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
9.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
9.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
9.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
8.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
8.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
8.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
8.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
7.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
7.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
7.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
7.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
7.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
6.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
6.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
6.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
5.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
5.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
5.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
5.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
5.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
5.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
4.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
4.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
4.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
4.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
4.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
4.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
4.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
3.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
3.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
3.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
3.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
3.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
3.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
3.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
2.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
2.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
2.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
2.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
2.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
1.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
0.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
0.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCEAL8 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.4
Number of samples
231
Samples
Sample
Description
TPM
DO45183
0 years, female, NA, stage:2, dead, 570 days
124.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
123.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
107.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
105.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
104.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
101.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
98.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
97.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
85.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
76.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
72.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
71.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
69.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
68.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
67.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
67.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
66.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
64.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
63.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
59.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
59.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
56.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
56.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
55.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
54.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
53.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
53.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
52.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
52.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
52.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
52.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
51.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
50.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
50.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
49.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
49.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
48.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
48.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
46.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
45.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
45.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
43.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
41.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
40.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
40.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
37.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
36.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
36.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
35.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
35.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
35.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
34.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
34.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
34.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
34.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
34.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
33.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
33.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
33.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
33.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
32.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
32.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
32.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
32.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
31.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
31.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
31.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
31.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
31.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
31.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
30.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
30.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
30.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
30.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
30.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
30.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
30.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
29.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
28.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
28.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
28.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
28.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
28.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
27.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
27.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
27.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
27.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
27.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
27.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
27.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
27.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
27.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
26.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
26.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
26.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
26.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
26.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
26.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
26.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
25.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
24.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
24.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
24.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
24.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
24.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
24.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
23.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
23.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
23.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
23.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
22.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
22.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
21.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
21.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
21.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
20.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
20.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
20.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
19.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
19.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
19.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
19.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
19.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
19.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
18.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
18.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
18.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
18.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
18.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
18.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
17.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
17.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
17.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
17.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
17.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
16.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
16.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
16.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
16.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
16.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
15.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
15.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
15.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
15.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
15.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
15.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
15.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
14.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
14.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
14.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
14.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
14.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
13.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
13.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
12.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
12.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
12.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
11.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
11.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
11.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
11.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
11.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
10.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
10.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
10.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
10.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
10.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
10.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
10.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
10.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
9.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
9.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
9.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
9.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
9.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
9.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
9.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
8.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
8.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
8.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
8.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
7.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
7.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
7.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
7.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
6.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
6.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
6.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
6.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
6.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
5.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
5.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
5.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
5.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
5.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
5.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
4.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
4.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
4.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
4.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
3.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
3.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
3.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
3.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
3.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
3.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
3.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
3.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
2.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
2.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
2.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
2.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
2.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
2.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
1.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
1.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
1.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
1.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
1.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
1.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
1.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
1.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
1.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
1.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
1.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
0.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.