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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HCLS1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
54.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
53.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
31.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
27.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
25.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
25.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
21.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
21.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
19.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
19.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
16.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
15.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
15.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
14.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
14.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
14.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
14.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
11.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
11.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
11.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
10.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
10.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
9.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
9.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
9.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
8.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
5.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
5.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
4.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
4.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
3.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
3.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
3.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
3.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
1.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HCLS1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
190.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
156.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
154.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
140.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
139.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
132.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
121.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
116.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
109.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
107.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
105.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
101.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
100.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
100.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
99.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
99.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
98.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
95.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
95.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
94.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
93.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
93.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
92.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
92.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
92.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
92.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
91.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
90.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
90.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
89.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
86.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
86.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
85.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
85.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
85.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
84.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
84.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
83.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
83.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
83.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
83.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
83.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
82.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
81.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
81.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
80.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
80.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
79.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
79.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
77.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
77.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
77.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
76.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
75.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
75.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
75.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
75.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
74.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
74.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
73.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
73.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
73.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
73.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
72.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
72.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
72.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
72.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
72.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
72.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
72.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
72.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
71.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
70.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
70.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
70.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
70.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
69.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
69.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
69.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
69.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
69.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
69.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
69.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
69.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
69.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
69.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
69.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
68.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
68.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
68.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
68.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
68.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
68.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
68.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
67.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
67.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
66.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
66.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
66.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
65.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
65.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
64.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
64.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
64.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
64.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
64.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
64.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
64.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
64.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
63.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
63.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
63.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
63.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
63.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
63.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
62.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
62.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
62.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
62.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
62.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
62.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
62.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
62.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
61.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
61.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
61.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
61.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
60.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
60.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
60.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
60.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
60.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
60.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
59.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
59.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
59.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
59.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
59.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
58.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
58.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
58.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
58.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
58.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
58.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
58.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
57.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
57.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
57.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
57.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
57.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
57.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
56.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
56.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
56.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
56.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
56.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
56.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
56.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
55.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
55.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
55.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
55.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
54.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
54.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
54.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
54.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
54.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
54.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
54.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
54.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
54.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
54.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
54.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
54.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
54.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
54.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
53.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
53.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
53.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
53.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
53.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
53.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
53.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
53.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
53.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
53.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
53.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
53.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
52.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
52.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
52.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
52.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
52.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
52.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
52.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
52.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
51.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
51.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
51.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
51.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
51.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
50.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
50.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
50.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
50.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
50.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
50.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
50.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
50.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
50.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
49.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
49.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
49.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
49.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
49.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
49.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
49.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
49.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
48.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
48.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
48.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
48.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
48.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
48.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
48.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
48.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
48.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
48.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
48.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
48.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
48.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
48.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
48.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
48.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
47.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
47.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
47.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
47.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
47.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
47.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
47.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
47.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
47.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
46.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
46.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
46.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
46.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
46.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
46.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
46.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
46.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
46.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
46.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
45.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
45.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
45.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
45.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
45.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
45.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
45.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
45.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
45.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
45.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
45.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
44.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
44.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
44.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
44.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
44.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
44.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
44.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
44.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
44.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
44.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
44.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
44.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
44.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
44.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
44.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
43.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
43.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
43.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
43.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
43.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
42.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
42.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
42.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
42.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
42.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
42.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
42.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
41.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
41.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
41.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
41.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
41.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
41.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
41.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
41.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
41.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
41.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
40.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
40.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
40.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
40.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
40.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
40.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
39.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
39.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
39.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
39.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
39.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
39.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
39.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
39.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
38.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
38.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
38.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
38.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
38.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
38.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
38.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
38.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
38.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
38.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
37.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
37.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
37.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
37.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
36.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
36.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
36.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
36.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
36.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
36.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
36.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
36.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
35.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
35.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
35.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
35.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
35.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
35.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
35.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
35.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
34.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
34.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
34.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
34.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
34.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
34.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
34.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
34.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
34.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
34.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
34.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
33.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
33.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
33.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
33.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
33.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
33.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
33.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
33.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
33.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
33.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
33.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
33.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
32.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
32.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
32.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
32.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
31.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
31.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
31.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
31.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
31.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
31.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
31.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
31.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
31.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
30.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
30.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
30.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
30.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
30.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
30.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
30.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
29.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
29.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
29.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
29.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
29.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
29.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
29.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
29.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
29.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
28.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
28.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
28.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
28.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
28.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
28.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
28.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
27.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
27.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
27.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
27.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
27.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
27.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
27.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
27.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
27.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
27.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
27.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
27.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
26.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
26.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
26.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
26.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
26.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
26.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
26.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
25.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
25.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
25.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
25.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
25.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
25.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
24.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
24.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
24.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
24.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
24.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
24.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
24.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
24.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
24.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
23.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
23.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
23.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
23.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
23.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
23.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
23.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
22.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
22.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
22.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
22.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
22.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
22.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
21.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
21.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
21.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
21.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
21.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
21.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
21.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
20.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
20.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
20.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
20.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
20.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
20.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
20.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
20.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
19.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
19.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
19.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
19.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
19.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
19.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
19.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
19.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
18.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
17.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
17.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
16.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
16.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
16.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
16.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
16.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
15.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
14.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
14.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
13.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
13.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
13.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
13.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
13.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
10.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
9.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
8.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
7.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
6.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
4.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
3.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
3.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
3.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HCLS1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
142.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
141.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
119.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
117.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
96.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
92.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
90.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
87.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
85.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
85.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
82.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
82.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
78.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
76.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
73.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
73.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
72.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
69.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
68.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
67.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
67.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
66.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
66.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
64.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
64.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
64.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
62.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
61.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
60.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
60.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
59.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
58.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
57.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
56.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
56.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
56.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
54.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
53.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
52.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
51.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
51.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
51.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
49.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
49.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
49.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
48.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
47.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
47.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
47.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
47.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
46.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
45.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
44.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
43.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
43.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
42.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
42.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
42.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
42.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
42.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
39.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
39.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
39.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
38.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
38.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
38.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
38.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
37.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
37.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
37.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
36.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
35.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
33.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
33.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
32.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
31.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
31.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
30.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
29.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
29.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
29.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
28.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
28.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
26.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
26.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
23.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
22.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
22.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
21.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
19.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
18.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
13.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
13.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
11.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HCLS1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
125.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
106.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
103.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
97.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
80.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
77.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
77.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
74.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
74.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
69.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
66.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
62.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
60.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
60.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
56.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
55.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
55.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
55.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
55.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
55.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
54.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
54.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
53.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
51.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
51.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
49.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
48.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
48.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
47.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
47.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
47.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
46.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
45.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
45.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
44.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
43.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
42.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
42.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
42.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
42.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
41.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
40.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
40.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
40.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
39.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
39.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
39.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
38.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
38.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
38.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
37.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
36.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
36.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
36.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
36.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
35.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
34.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
34.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
34.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
33.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
33.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
33.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
33.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
33.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
32.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
32.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
32.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
32.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
32.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
32.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
32.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
32.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
31.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
31.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
30.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
30.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
30.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
29.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
29.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
29.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
29.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
29.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
29.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
29.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
29.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
29.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
28.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
28.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
28.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
28.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
27.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
26.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
25.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
25.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
25.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
24.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
24.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
24.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
24.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
24.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
23.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
23.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
23.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
23.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
23.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
23.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
23.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
22.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
22.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
22.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
21.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
21.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
21.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
21.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
21.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
21.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
21.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
20.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
20.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
20.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
20.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
20.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
19.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
19.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
19.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
19.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
19.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
19.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
18.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
18.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
18.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
18.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
18.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
18.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
18.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
18.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
17.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
17.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
17.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
17.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
17.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
17.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
17.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
17.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
17.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
16.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
16.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
16.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
16.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
16.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
16.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
16.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
16.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
16.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
15.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
15.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
15.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
15.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
15.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
14.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
14.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
14.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
14.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
14.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
14.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
14.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
13.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
13.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
13.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
13.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
13.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
13.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
13.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
12.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
12.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
12.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
12.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
12.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
12.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
12.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
11.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
11.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
11.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
10.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
10.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
10.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
10.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
10.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
10.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
9.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
9.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
9.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
9.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
9.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
9.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
8.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
8.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
8.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
8.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
8.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
8.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
8.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
8.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
7.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
7.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
7.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
7.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
7.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
6.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
6.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
5.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
5.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
5.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
5.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
5.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
5.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
5.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
4.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
4.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
4.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
4.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
4.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
4.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
4.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
4.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
3.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
2.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
2.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
2.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
1.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
2.0
CPT0017410003
Tumor
1.5
CPT0079380003
Tumor
1.4
CPT0012180003
Tumor
1.4
CPT0081880003
Tumor
1.2
CPT0078990003
Tumor
1.1
CPT0075560003
Tumor
1.0
CPT0092730003
Tumor
0.9
CPT0010110003
Tumor
0.9
CPT0001180009
Tumor
0.9
CPT0092160003
Tumor
0.9
CPT0017850003
Tumor
0.9
CPT0001540009
Tumor
0.9
CPT0066480003
Tumor
0.8
CPT0078510003
Tumor
0.8
CPT0065430003
Tumor
0.8
CPT0065870003
Tumor
0.7
CPT0000640003
Tumor
0.7
CPT0011240003
Tumor
0.7
CPT0001260009
Tumor
0.7
CPT0077320001
Normal
0.7
CPT0025290003
Tumor
0.7
CPT0025050003
Tumor
0.7
CPT0084560003
Tumor
0.6
CPT0065690003
Tumor
0.6
CPT0092190003
Normal
0.6
CPT0002350011
Tumor
0.6
CPT0088630003
Tumor
0.6
CPT0023350003
Tumor
0.6
CPT0086360003
Tumor
0.6
CPT0015910003
Tumor
0.6
CPT0075130003
Tumor
0.6
CPT0009060003
Tumor
0.6
CPT0026410003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0023690003
Tumor
0.5
CPT0081600003
Tumor
0.5
CPT0086870003
Tumor
0.5
CPT0025880003
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0065810003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0025170003
Tumor
0.4
CPT0075170001
Normal
0.4
CPT0020120003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0088900003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0000870016
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0014470001
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0019990003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0069160003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0006630003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0024680001
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0086950003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0065750003
Tumor
-0.2
CPT0006530001
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0018250001
Normal
-0.3
CPT0012920003
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0025580004
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0000660001
Normal
-0.3
CPT0001340003
Tumor
-0.4
CPT0069190001
Normal
-0.4
CPT0088710001
Normal
-0.4
CPT0025060001
Normal
-0.5
CPT0078660003
Tumor
-0.5
CPT0088970003
Tumor
-0.5
CPT0023360001
Normal
-0.5
CPT0063640001
Normal
-0.5
CPT0063330001
Normal
-0.5
CPT0078530001
Normal
-0.5
CPT0013790003
Normal
-0.5
CPT0014130001
Normal
-0.5
CPT0079300001
Normal
-0.5
CPT0086970003
Normal
-0.5
CPT0009020003
Normal
-0.5
CPT0088920001
Normal
-0.6
CPT0079430001
Normal
-0.6
CPT0086830003
Normal
-0.6
CPT0025610001
Normal
-0.6
CPT0002370001
Normal
-0.6
CPT0089040001
Normal
-0.6
CPT0012640003
Normal
-0.7
CPT0001510001
Normal
-0.7
CPT0077500001
Normal
-0.7
CPT0069010001
Normal
-0.7
CPT0014350001
Normal
-0.7
CPT0001550001
Normal
-0.7
CPT0092740003
Normal
-0.7
CPT0012090003
Normal
-0.7
CPT0082010001
Normal
-0.7
CPT0081620001
Normal
-0.7
CPT0019160001
Normal
-0.7
CPT0092310003
Normal
-0.7
CPT0087050003
Normal
-0.7
CPT0010170001
Normal
-0.7
CPT0001230001
Normal
-0.7
CPT0092800003
Normal
-0.7
CPT0007470001
Normal
-0.8
CPT0076350001
Normal
-0.8
CPT0078840001
Normal
-0.8
CPT0078940001
Normal
-0.8
CPT0086370003
Normal
-0.8
CPT0006950001
Normal
-0.8
CPT0079000001
Normal
-0.8
CPT0006730001
Normal
-0.8
CPT0088500001
Normal
-0.9
CPT0001350001
Normal
-0.9
CPT0079510001
Normal
-0.9
CPT0088640003
Normal
-0.9
CPT0078670001
Normal
-0.9
CPT0086890003
Normal
-0.9
CPT0088780001
Normal
-0.9
CPT0064400001
Normal
-0.9
CPT0026420001
Normal
-1.0
CPT0012570003
Normal
-1.0
CPT0025920001
Normal
-1.0
CPT0020020001
Normal
-1.0
CPT0009080003
Normal
-1.0
CPT0065450001
Normal
-1.0
CPT0000790001
Normal
-1.0
CPT0023710001
Normal
-1.0
CPT0020130001
Normal
-1.1
CPT0079180003
Tumor
-1.1
CPT0089480003
Normal
-1.2
CPT0066430001
Normal
-1.2
CPT0077140001
Normal
-1.2
CPT0012770003
Normal
-1.2
CPT0007870001
Normal
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
