HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.8 nTPM
HPA Brain:20.5 nTPM
GTEx:11.8 nTPM
FANTOM5:39.2 Scaled Tags Per Million
Pig:17.5 nTPM
Mouse:16.2 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 20.5
Sample id Sample description nTPM
Hippocampus
nTPM: 19.6
2621 Female, age 67, right hemisphere 20.7
1855 Male, age 76, left hemisphere 20.5
1911 Female, age 85, right hemisphere 20.3
1898 Male, age 80, left hemisphere 19.4
2148 Female, age 91, left hemisphere 19.4
2529 Female, age 94, left hemisphere 17.2
Dentate gyrus
nTPM: 20.0
2010 Male, age 76, both hemispheres 21.3
2531 Female, age 67, both hemispheres 20.8
2246 Female, age 85, both hemispheres 20.2
1927 Female, age 91, both hemispheres 19.6
2530 Female, age 94, left hemisphere 19.3
2528 Male, age 74, both hemispheres 18.5
Entorhinal gyrus
nTPM: 18.4
2764 Male, age 80, right hemisphere 19.5
2117 Female, age 91, right hemisphere 19.4
1787 Male, age 76, left hemisphere 19.3
1938 Female, age 85, left hemisphere 17.6
2613 Female, age 94, left hemisphere 17.2
2686 Male, age 75, right hemisphere 17.2
Hippocampus, CA1
nTPM: 20.4
2045 Male, age 76, both hemispheres 23.5
2749 Male, age 80, left hemisphere 21.4
2527 Male, age 74, both hemispheres 20.4
1873 Female, age 85, both hemispheres 19.4
2082 Female, age 91, right hemisphere 17.3
Hippocampus, CA2
nTPM: 19.5
1892 Male, age 76, both hemispheres 22.5
1963 Male, age 80, left hemisphere 19.9
1940 Female, age 85, left hemisphere 19.7
2437 Female, age 94, left hemisphere 18.8
2249 Male, age 74, both hemispheres 18.5
2113 Female, age 91, right hemisphere 17.6
Hippocampus, CA3
nTPM: 19.9
2436 Male, age 74, both hemispheres 21.2
2137 Male, age 80, left hemisphere 20.9
1891 Female, age 85, both hemispheres 20.4
2620 Female, age 94, left hemisphere 19.7
1867 Male, age 76, both hemispheres 19.6
2861 Female, age 67, both hemispheres 17.5
Parahippocampal cortex
nTPM: 19.4
2692 Male, age 74, both hemispheres 23.1
1850 Male, age 80, both hemispheres 21.0
2693 Female, age 94, both hemispheres 20.5
2532 Female, age 72, left hemisphere 20.2
1990 Female, age 91, right hemisphere 19.4
2245 Female, age 91, both hemispheres 18.6
2622 Female, age 67, right hemisphere 18.1
1933 Female, age 85, both hemispheres 18.0
2018 Male, age 76, both hemispheres 17.7
2250 Female, age 67, right hemisphere 17.6
Perirhinal gyrus
nTPM: 19.0
2848 Male, age 76, right hemisphere 20.0
1794 Male, age 80, right hemisphere 19.2
2521 Female, age 94, right hemisphere 19.1
1847 Female, age 91, left hemisphere 18.9
1841 Female, age 85, right hemisphere 17.8
Subiculum
nTPM: 20.5
2438 Female, age 94, left hemisphere 22.3
2619 Male, age 74, both hemispheres 21.6
1901 Male, age 80, both hemispheres 20.8
2042 Male, age 76, both hemispheres 20.7
1977 Female, age 85, both hemispheres 19.5
2729 Female, age 91, right hemisphere 18.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.8
Samples: 197

Max nTPM: 22.3
Min nTPM: 5.7
Std nTPM: 2.4
Median nTPM: 11.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 22.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 18.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 18.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 18.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 18.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 17.0
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 16.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 16.3
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 16.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 16.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 15.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 39.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.2
FF:10169-103B7 60 years, female 46.7
FF:10153-102I9 76 years, female 31.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 17.5
Pig sample Sample description nTPM
Subiculum
nTPM: 15.8
Samples: 4

Max nTPM: 17.6
Min nTPM: 14.5
Sample A Female 17.6
Sample B Female 14.5
Sample C Male 16.1
Sample D Male 14.9
Dorsal hippocampus
nTPM: 16.3
Samples: 4

Max nTPM: 17.9
Min nTPM: 14.8
Sample A Female 17.9
Sample B Female 16.6
Sample C Male 15.8
Sample D Male 14.8
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 19.4
Min nTPM: 16.6
Sample A Female 19.4
Sample B Female 17.1
Sample C Male 16.6
Sample D Male 17.0
Ventral hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 16.8
Min nTPM: 13.7
Sample A Female 15.0
Sample B Female 13.7
Sample C Male 16.8
Sample D Male 16.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 16.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 15.5
Min nTPM: 13.0
Sample A Male 13.4
Sample B Male 13.0
Sample C Female 14.4
Sample D Female 15.5
Hippocampal formation
nTPM: 16.2
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.2
Sample A Male 14.6
Sample B Male 17.9
Sample C Female 18.0
Sample D Female 14.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
74578377 Antisense, RP_060215_01_B12, Mouse strain C57BL/6J (56 days, male) 7.2
73927790 Antisense, RP_051219_01_G08, Mouse strain C57BL/6J (56 days, male) 0.0

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