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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MYADM is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
94.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
86.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
84.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
84.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
80.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
79.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
79.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
72.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
70.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
69.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
69.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
65.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
62.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
60.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
59.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
57.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
57.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
57.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
55.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
54.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
54.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
54.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
52.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
52.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
51.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
51.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
50.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
50.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
49.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
49.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
49.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
48.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
47.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
45.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
45.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
44.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
43.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
43.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
43.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
43.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
42.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
41.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
41.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
41.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
41.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
41.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
40.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
39.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
39.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
39.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
38.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
37.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
37.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
37.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
37.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
37.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
37.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
37.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
36.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
35.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
35.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
34.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
33.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
33.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
33.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
33.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
32.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
32.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
32.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
32.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
31.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
31.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
31.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
31.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
31.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
31.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
30.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
30.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
30.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
30.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
29.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
29.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
28.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
28.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
28.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
27.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
27.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
27.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
27.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
27.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
26.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
26.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
26.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
26.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
26.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
26.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
26.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
26.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
26.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
26.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
26.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
26.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
25.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
25.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
25.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
25.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
25.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
25.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
25.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
24.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
24.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
24.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
24.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
24.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
23.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
23.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
23.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
23.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
23.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
22.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
22.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
22.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
22.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
22.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
22.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
22.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
22.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
21.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
21.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
21.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
21.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
20.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
20.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
20.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
20.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
20.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
20.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
20.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
20.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
20.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
20.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
20.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
20.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
20.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
20.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
19.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
19.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
19.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
19.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
19.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
19.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
19.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
19.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
19.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
19.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
19.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
18.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
18.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
18.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
18.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
18.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
17.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
17.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
17.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
17.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
17.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
17.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
17.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
17.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
17.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
17.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
17.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
17.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
17.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
17.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
16.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
16.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
16.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
16.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
16.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
16.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
16.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
16.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
16.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
16.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
16.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
16.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
15.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
15.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
15.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
15.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
15.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
15.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
15.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
15.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
15.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
15.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
15.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
15.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
15.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
15.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
15.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
15.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
14.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
14.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
14.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
14.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
14.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
14.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
14.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
14.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
14.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
14.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
14.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
14.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
14.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
14.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
13.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
13.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
13.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
13.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
13.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
13.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
13.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
13.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
13.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
13.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
13.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
13.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
13.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
13.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
13.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
12.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
12.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
12.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
12.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
12.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
12.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
12.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
12.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
12.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
12.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
12.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
12.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
12.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
12.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
12.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
12.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
12.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
11.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
11.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
11.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
11.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
11.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
11.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
11.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
11.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
11.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
11.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
10.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
10.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
10.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
10.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
10.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
10.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
10.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
10.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
10.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
9.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
9.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
9.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
9.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
9.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
9.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
9.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
9.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
9.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
9.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
9.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
9.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
9.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
8.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
8.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
8.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
8.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
8.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
8.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
7.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
7.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
7.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
7.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
7.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
7.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
7.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
7.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
7.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
7.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
7.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
7.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
7.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
6.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
6.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
6.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
6.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
6.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
5.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
5.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
5.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
5.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
4.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
4.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
4.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
4.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
4.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
4.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
3.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
3.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
2.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MYADM is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.8
Number of samples
231
Samples
Sample
Description
TPM
DO45299
0 years, female, NA, stage:1, alive, 1440 days
149.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
97.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
89.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
84.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
78.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
70.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
64.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
61.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
60.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
59.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
58.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
58.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
57.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
56.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
50.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
48.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
48.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
45.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
43.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
41.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
39.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
39.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
39.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
38.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
37.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
35.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
35.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
34.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
34.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
33.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
32.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
32.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
32.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
31.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
30.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
30.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
29.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
28.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
28.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
27.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
27.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
27.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
26.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
26.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
26.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
26.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
25.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
25.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
25.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
25.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
24.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
24.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
24.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
24.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
23.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
23.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
23.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
23.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
23.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
23.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
23.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
22.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
22.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
22.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
22.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
22.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
21.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
21.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
21.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
20.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
20.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
20.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
20.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
20.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
20.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
20.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
19.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
19.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
19.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
19.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
18.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
18.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
18.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
18.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
18.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
18.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
18.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
17.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
17.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
17.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
17.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
15.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
15.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
15.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
15.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
15.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
15.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
14.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
14.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
14.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
14.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
14.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
14.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
14.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
14.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
14.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
14.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
13.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
13.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
13.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
13.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
13.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
13.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
13.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
13.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
13.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
12.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
12.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
12.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
12.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
12.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
12.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
12.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
12.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
12.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
12.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
12.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
12.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
12.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
11.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
11.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
11.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
11.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
11.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
11.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
11.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
11.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
11.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
11.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
10.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
10.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
10.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
10.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
10.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
10.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
9.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
9.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
9.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
9.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
9.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
9.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
9.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
9.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
9.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
8.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
8.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
8.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
8.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
8.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
8.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
8.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
8.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
8.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
8.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
8.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
8.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
8.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
8.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
7.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
7.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
7.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
7.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
7.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
7.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
7.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
7.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
6.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
6.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
6.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
6.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
6.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
6.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
6.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
6.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
6.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
5.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
5.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
5.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
5.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
5.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
5.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
5.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
5.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
5.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
5.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
5.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
4.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
4.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
4.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
4.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
4.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
4.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
4.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
4.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
4.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
3.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
3.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
3.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
3.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
3.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
3.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
3.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
3.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
3.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
2.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
2.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
1.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
435
Tumor
0.9
1025
Tumor
0.8
311
Tumor
0.8
192
Normal
0.7
297
Tumor
0.7
343
Tumor
0.7
413
Tumor
0.6
331
Tumor
0.6
665
Tumor
0.6
685
Tumor
0.6
425
Tumor
0.5
421
Tumor
0.5
975
Tumor
0.5
147
Tumor
0.5
283
Tumor
0.5
815
Tumor
0.5
124
Normal
0.5
277
Tumor
0.4
444
Normal
0.4
433
Tumor
0.4
817
Tumor
0.4
271
Tumor
0.4
671
Tumor
0.4
672
Normal
0.4
567
Tumor
0.4
185
Tumor
0.4
344
Normal
0.4
146
Normal
0.3
221
Tumor
0.3
211
Tumor
0.3
393
Tumor
0.3
434
Normal
0.3
471
Tumor
0.3
455
Tumor
0.3
363
Tumor
0.3
214
Normal
0.3
641
Tumor
0.3
385
Tumor
0.3
368
Normal
0.3
213
Tumor
0.3
141
Tumor
0.3
171
Tumor
0.3
142
Normal
0.3
341
Tumor
0.3
351
Tumor
0.3
463
Tumor
0.2
878
Normal
0.2
354
Normal
0.2
715
Tumor
0.2
881
Tumor
0.2
432
Normal
0.2
131
Tumor
0.2
744
Normal
0.2
666
Normal
0.2
436
Normal
0.2
461
Tumor
0.2
383
Tumor
0.2
217
Tumor
0.2
358
Normal
0.2
126
Normal
0.2
342
Normal
0.2
352
Normal
0.2
224
Normal
0.2
478
Normal
0.2
138
Normal
0.2
222
Normal
0.2
424
Normal
0.2
312
Normal
0.2
877
Tumor
0.2
232
Normal
0.2
395
Tumor
0.2
617
Tumor
0.1
525
Tumor
0.1
636
Normal
0.1
384
Normal
0.1
422
Normal
0.1
218
Normal
0.1
223
Tumor
0.1
921
Tumor
0.1
662
Normal
0.1
332
Normal
0.1
268
Normal
0.1
474
Normal
0.1
926
Normal
0.1
724
Normal
0.1
743
Tumor
0.1
228
Normal
0.1
951
Tumor
0.1
642
Normal
0.1
914
Normal
0.1
446
Normal
0.1
285
Tumor
0.1
231
Tumor
0.1
262
Normal
0.1
818
Normal
0.1
571
Tumor
0.1
713
Tumor
0.0
191
Tumor
0.0
137
Tumor
0.0
618
Normal
0.0
136
Normal
0.0
447
Tumor
0.0
196
Normal
0.0
813
Tumor
0.0
698
Normal
0.0
414
Normal
0.0
392
Normal
0.0
367
Tumor
0.0
882
Normal
0.0
965
Tumor
0.0
473
Tumor
0.0
956
Normal
0.0
545
Tumor
0.0
272
Normal
0.0
628
Normal
0.0
445
Tumor
0.0
664
Normal
0.0
451
Tumor
0.0
375
Tumor
0.0
572
Normal
0.0
917
Tumor
0.0
635
Tumor
0.0
386
Normal
0.0
464
Normal
0.0
125
Tumor
0.0
857
Tumor
0.0
258
Normal
0.0
428
Normal
0.0
516
Normal
0.0
498
Normal
0.0
466
Normal
0.0
491
Tumor
0.0
574
Normal
0.0
745
Tumor
0.0
443
Tumor
0.0
884
Normal
-0.1
391
Tumor
-0.1
573
Tumor
-0.1
111
Normal
-0.1
786
Normal
-0.1
412
Normal
-0.1
982
Normal
-0.1
298
Normal
-0.1
816
Normal
-0.1
355
Tumor
-0.1
778
Normal
-0.1
538
Normal
-0.1
314
Normal
-0.1
472
Normal
-0.1
616
Normal
-0.1
661
Tumor
-0.1
515
Tumor
-0.1
132
Normal
-0.1
695
Tumor
-0.1
123
Tumor
-0.1
963
Tumor
-0.1
195
Tumor
-0.1
278
Normal
-0.1
918
Normal
-0.1
448
Normal
-0.1
468
Normal
-0.1
954
Normal
-0.1
663
Tumor
-0.1
1016
Normal
-0.1
284
Normal
-0.1
557
Tumor
-0.1
462
Normal
-0.1
456
Normal
-0.1
943
Tumor
-0.1
785
Tumor
-0.1
627
Tumor
-0.1
357
Tumor
-0.1
1044
Normal
-0.1
922
Normal
-0.1
135
Tumor
-0.1
416
Normal
-0.1
426
Normal
-0.1
366
Normal
-0.1
488
Normal
-0.1
427
Tumor
-0.1
114
Normal
-0.1
365
Tumor
-0.1
524
Normal
-0.2
364
Normal
-0.2
388
Normal
-0.2
396
Normal
-0.2
286
Normal
-0.2
746
Normal
-0.2
387
Tumor
-0.2
415
Tumor
-0.2
563
Tumor
-0.2
353
Tumor
-0.2
394
Normal
-0.2
952
Normal
-0.2
362
Normal
-0.2
851
Tumor
-0.2
823
Tumor
-0.2
187
Tumor
-0.2
916
Normal
-0.2
976
Normal
-0.2
536
Normal
-0.2
874
Normal
-0.2
814
Normal
-0.2
494
Normal
-0.2
863
Tumor
-0.2
558
Normal
-0.2
858
Normal
-0.2
528
Normal
-0.2
257
Tumor
-0.2
517
Tumor
-0.2
924
Normal
-0.2
756
Normal
-0.2
944
Normal
-0.2
188
Normal
-0.2
227
Tumor
-0.2
492
Normal
-0.2
824
Normal
-0.2
148
Normal
-0.2
113
Tumor
-0.2
615
Tumor
-0.2
162
Normal
-0.2
212
Normal
-0.2
1032
Normal
-0.2
128
Normal
-0.2
647
Tumor
-0.2
686
Normal
-0.2
564
Normal
-0.2
376
Normal
-0.2
452
Normal
-0.2
938
Normal
-0.2
852
Normal
-0.2
186
Normal
-0.2
172
Normal
-0.2
866
Normal
-0.2
967
Tumor
-0.2
482
Normal
-0.2
467
Tumor
-0.3
777
Tumor
-0.3
864
Normal
-0.3
483
Tumor
-0.3
145
Tumor
-0.3
477
Tumor
-0.3
527
Tumor
-0.3
568
Normal
-0.3
912
Normal
-0.3
313
Tumor
-0.3
261
Tumor
-0.3
968
Normal
-0.3
161
Tumor
-0.3
696
Normal
-0.3
722
Normal
-0.3
714
Normal
-0.3
728
Normal
-0.3
738
Normal
-0.3
867
Tumor
-0.3
727
Tumor
-0.3
328
Normal
-0.3
523
Tumor
-0.3
964
Normal
-0.3
958
Normal
-0.3
518
Normal
-0.3
981
Tumor
-0.3
737
Tumor
-0.3
361
Tumor
-0.3
356
Normal
-0.3
534
Normal
-0.3
267
Tumor
-0.4
1046
Normal
-0.4
465
Tumor
-0.4
955
Tumor
-0.4
873
Tumor
-0.4
546
Normal
-0.4
742
Normal
-0.4
883
Tumor
-0.4
716
Normal
-0.4
1042
Normal
-0.4
127
Tumor
-0.4
423
Tumor
-0.4
1028
Normal
-0.4
1026
Normal
-0.4
984
Normal
-0.4
431
Tumor
-0.4
923
Tumor
-0.5
112
Tumor
-0.5
1015
Tumor
-0.5
514
Normal
-0.5
327
Tumor
-0.5
648
Normal
-0.5
868
Normal
-0.5
983
Tumor
-0.5
755
Tumor
-0.5
533
Tumor
-0.5
526
Normal
-0.5
723
Tumor
-0.5
1022
Normal
-0.5
915
Tumor
-0.5
493
Tumor
-0.5
484
Normal
-0.5
862
Normal
-0.5
554
Normal
-0.5
741
Tumor
-0.5
1021
Tumor
-0.6
913
Tumor
-0.6
953
Tumor
-0.6
861
Tumor
-0.6
497
Tumor
-0.6
721
Tumor
-0.6
978
Normal
-0.6
1043
Tumor
-0.6
1014
Normal
-0.6
1045
Tumor
-0.6
537
Tumor
-0.6
966
Normal
-0.7
697
Tumor
-0.7
937
Tumor
-0.7
513
Tumor
-0.7
977
Tumor
-0.7
481
Tumor
-0.7
411
Tumor
-0.7
925
Tumor
-0.8
553
Tumor
-0.8
865
Tumor
-0.8
1031
Tumor
-0.8
487
Tumor
-0.9
911
Tumor
-0.9
535
Tumor
-1.0
1013
Tumor
-1.0
1041
Tumor
-1.1
1027
Tumor
-1.2
957
Tumor
-1.2
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.