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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAGED1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
58.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
329.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
296.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
287.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
243.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
225.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
222.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
219.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
214.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
207.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
201.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
184.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
180.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
180.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
174.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
174.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
172.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
170.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
166.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
164.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
156.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
152.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
151.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
150.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
147.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
146.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
145.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
143.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
143.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
141.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
141.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
141.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
139.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
139.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
139.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
130.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
129.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
129.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
127.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
123.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
123.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
122.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
121.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
114.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
114.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
113.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
113.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
112.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
108.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
107.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
104.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
104.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
101.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
99.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
99.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
98.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
95.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
94.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
93.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
93.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
92.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
92.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
91.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
91.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
91.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
90.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
89.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
89.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
87.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
85.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
85.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
84.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
83.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
79.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
79.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
78.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
78.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
78.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
78.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
77.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
77.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
76.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
75.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
74.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
73.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
73.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
72.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
72.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
71.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
71.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
71.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
71.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
71.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
70.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
70.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
70.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
70.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
70.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
69.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
69.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
69.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
69.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
68.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
68.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
68.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
68.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
68.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
67.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
67.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
67.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
66.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
66.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
66.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
65.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
65.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
64.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
64.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
64.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
64.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
63.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
63.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
62.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
62.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
62.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
61.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
61.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
60.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
60.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
59.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
59.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
59.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
59.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
58.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
58.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
58.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
58.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
57.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
56.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
56.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
56.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
56.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
56.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
55.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
55.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
55.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
55.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
54.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
53.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
53.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
53.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
52.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
52.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
52.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
52.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
52.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
51.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
51.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
51.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
51.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
49.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
49.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
49.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
48.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
48.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
48.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
48.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
47.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
47.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
47.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
47.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
47.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
46.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
46.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
46.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
46.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
45.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
45.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
45.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
45.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
44.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
44.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
44.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
44.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
43.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
43.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
42.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
42.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
42.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
42.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
41.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
41.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
41.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
41.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
41.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
40.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
40.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
40.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
39.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
39.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
39.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
38.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
38.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
38.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
38.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
38.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
38.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
37.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
37.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
37.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
37.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
37.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
37.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
36.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
36.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
36.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
36.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
36.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
35.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
35.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
34.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
34.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
34.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
33.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
33.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
33.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
33.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
32.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
32.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
31.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
31.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
31.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
31.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
31.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
31.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
31.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
30.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
30.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
30.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
30.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
30.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
30.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
30.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
30.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
29.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
29.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
29.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
28.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
28.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
28.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
27.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
27.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
27.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
27.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
26.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
26.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
26.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
25.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
25.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
24.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
24.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
24.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
23.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
23.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
23.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
23.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
23.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
23.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
23.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
23.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
23.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
22.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
22.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
22.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
22.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
22.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
22.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
21.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
21.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
21.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
21.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
21.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
21.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
21.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
21.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
21.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
21.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
20.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
20.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
20.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
20.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
20.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
20.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
19.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
19.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
19.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
19.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
19.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
18.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
18.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
18.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
18.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
18.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
18.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
18.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
17.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
17.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
17.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
16.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
16.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
16.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
16.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
16.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
15.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
15.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
15.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
15.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
14.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
14.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
14.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
14.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
14.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
13.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
13.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
13.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
13.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
13.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
13.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
12.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
12.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
12.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
12.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
12.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
11.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
11.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
10.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
10.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
10.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
9.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
9.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
9.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
9.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
9.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
8.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
8.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
7.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
7.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
7.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
7.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
7.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
7.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
7.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
6.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
5.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
3.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
2.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
1.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
0.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAGED1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.8
Number of samples
231
Samples
Sample
Description
TPM
DO45193
0 years, female, NA, stage:4, dead, 120 days
324.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
248.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
248.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
209.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
203.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
194.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
156.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
154.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
148.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
142.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
141.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
137.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
135.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
134.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
133.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
133.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
131.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
128.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
127.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
123.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
122.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
120.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
118.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
112.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
108.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
103.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
103.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
100.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
98.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
98.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
97.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
96.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
95.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
93.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
90.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
89.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
87.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
86.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
84.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
83.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
83.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
83.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
83.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
80.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
79.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
77.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
77.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
77.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
76.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
75.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
75.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
74.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
74.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
73.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
72.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
72.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
71.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
69.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
69.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
68.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
68.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
68.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
67.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
66.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
65.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
65.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
65.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
64.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
64.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
64.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
64.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
63.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
63.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
63.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
63.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
62.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
61.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
60.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
59.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
58.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
58.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
58.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
57.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
57.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
55.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
55.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
54.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
54.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
53.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
53.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
52.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
52.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
52.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
51.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
50.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
50.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
50.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
48.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
48.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
47.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
47.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
47.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
46.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
46.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
46.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
46.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
45.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
45.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
45.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
45.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
45.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
44.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
44.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
43.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
42.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
42.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
42.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
41.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
41.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
41.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
40.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
40.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
40.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
40.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
40.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
38.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
38.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
38.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
37.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
37.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
37.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
37.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
37.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
37.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
37.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
36.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
36.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
35.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
35.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
35.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
35.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
35.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
35.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
34.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
34.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
33.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
33.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
33.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
33.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
33.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
33.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
32.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
31.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
29.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
29.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
29.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
28.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
28.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
28.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
28.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
27.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
27.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
26.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
26.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
26.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
25.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
25.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
24.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
24.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
24.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
24.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
23.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
23.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
22.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
22.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
22.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
22.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
21.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
21.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
21.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
21.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
21.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
20.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
20.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
20.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
20.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
19.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
19.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
19.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
19.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
18.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
18.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
18.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
18.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
17.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
17.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
17.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
17.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
16.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
16.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
16.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
15.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
15.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
15.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
14.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
14.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
13.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
13.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
12.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
12.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
12.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
11.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
11.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
11.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
11.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
11.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
11.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
10.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
9.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
9.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
8.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
8.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
6.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
4.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
4.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
1.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
1.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
0.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
0.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
0.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
965
Tumor
2.1
724
Normal
1.9
951
Tumor
1.7
123
Tumor
1.6
363
Tumor
1.6
545
Tumor
1.5
351
Tumor
1.5
171
Tumor
1.5
983
Tumor
1.4
231
Tumor
1.4
1013
Tumor
1.4
661
Tumor
1.3
367
Tumor
1.2
1021
Tumor
1.2
883
Tumor
1.2
943
Tumor
1.1
127
Tumor
1.1
671
Tumor
1.1
647
Tumor
0.9
285
Tumor
0.9
477
Tumor
0.9
525
Tumor
0.9
283
Tumor
0.9
777
Tumor
0.8
221
Tumor
0.8
473
Tumor
0.8
737
Tumor
0.7
391
Tumor
0.7
814
Normal
0.7
537
Tumor
0.7
383
Tumor
0.7
917
Tumor
0.7
815
Tumor
0.7
311
Tumor
0.7
617
Tumor
0.6
743
Tumor
0.6
487
Tumor
0.6
665
Tumor
0.6
411
Tumor
0.6
533
Tumor
0.6
641
Tumor
0.6
697
Tumor
0.6
185
Tumor
0.6
447
Tumor
0.5
387
Tumor
0.5
923
Tumor
0.5
535
Tumor
0.5
813
Tumor
0.5
1045
Tumor
0.5
527
Tumor
0.5
817
Tumor
0.5
921
Tumor
0.5
553
Tumor
0.5
131
Tumor
0.5
861
Tumor
0.5
1031
Tumor
0.5
385
Tumor
0.4
963
Tumor
0.4
217
Tumor
0.4
663
Tumor
0.4
695
Tumor
0.4
421
Tumor
0.4
881
Tumor
0.4
187
Tumor
0.4
713
Tumor
0.4
915
Tumor
0.4
715
Tumor
0.4
937
Tumor
0.3
1027
Tumor
0.3
435
Tumor
0.3
455
Tumor
0.3
331
Tumor
0.3
913
Tumor
0.3
463
Tumor
0.3
341
Tumor
0.3
257
Tumor
0.3
727
Tumor
0.3
877
Tumor
0.3
425
Tumor
0.3
1025
Tumor
0.2
925
Tumor
0.2
465
Tumor
0.2
461
Tumor
0.2
413
Tumor
0.2
865
Tumor
0.2
483
Tumor
0.2
863
Tumor
0.2
113
Tumor
0.2
471
Tumor
0.2
137
Tumor
0.2
563
Tumor
0.2
395
Tumor
0.2
823
Tumor
0.2
851
Tumor
0.1
343
Tumor
0.1
493
Tumor
0.1
427
Tumor
0.1
567
Tumor
0.1
451
Tumor
0.1
517
Tumor
0.0
211
Tumor
0.0
536
Normal
0.0
195
Tumor
0.0
572
Normal
0.0
271
Tumor
0.0
744
Normal
0.0
1043
Tumor
0.0
916
Normal
0.0
1015
Tumor
0.0
227
Tumor
0.0
452
Normal
0.0
785
Tumor
0.0
616
Normal
0.0
365
Tumor
0.0
884
Normal
0.0
223
Tumor
0.0
1026
Normal
0.0
857
Tumor
0.0
497
Tumor
-0.1
172
Normal
-0.1
297
Tumor
-0.1
745
Tumor
-0.1
957
Tumor
-0.1
786
Normal
-0.1
355
Tumor
-0.1
515
Tumor
-0.1
361
Tumor
-0.1
188
Normal
-0.1
975
Tumor
-0.1
433
Tumor
-0.1
958
Normal
-0.1
375
Tumor
-0.1
358
Normal
-0.1
852
Normal
-0.1
368
Normal
-0.1
261
Tumor
-0.1
162
Normal
-0.1
267
Tumor
-0.1
672
Normal
-0.1
357
Tumor
-0.1
443
Tumor
-0.1
147
Tumor
-0.1
416
Normal
-0.1
534
Normal
-0.2
446
Normal
-0.2
135
Tumor
-0.2
573
Tumor
-0.2
384
Normal
-0.2
364
Normal
-0.2
662
Normal
-0.2
685
Tumor
-0.2
356
Normal
-0.2
964
Normal
-0.2
186
Normal
-0.2
161
Tumor
-0.2
148
Normal
-0.2
313
Tumor
-0.2
354
Normal
-0.2
478
Normal
-0.2
445
Tumor
-0.2
755
Tumor
-0.2
258
Normal
-0.2
314
Normal
-0.2
468
Normal
-0.2
968
Normal
-0.2
332
Normal
-0.2
352
Normal
-0.2
462
Normal
-0.2
666
Normal
-0.2
286
Normal
-0.2
482
Normal
-0.3
284
Normal
-0.3
956
Normal
-0.3
141
Tumor
-0.3
882
Normal
-0.3
524
Normal
-0.3
277
Tumor
-0.3
1042
Normal
-0.3
664
Normal
-0.3
648
Normal
-0.3
393
Tumor
-0.3
268
Normal
-0.3
977
Tumor
-0.3
474
Normal
-0.3
571
Tumor
-0.3
978
Normal
-0.3
472
Normal
-0.3
778
Normal
-0.3
984
Normal
-0.3
466
Normal
-0.3
224
Normal
-0.3
212
Normal
-0.3
756
Normal
-0.3
538
Normal
-0.3
278
Normal
-0.3
327
Tumor
-0.3
112
Tumor
-0.3
528
Normal
-0.3
196
Normal
-0.3
912
Normal
-0.3
518
Normal
-0.3
728
Normal
-0.3
412
Normal
-0.3
967
Tumor
-0.3
516
Normal
-0.3
741
Tumor
-0.3
966
Normal
-0.4
218
Normal
-0.4
976
Normal
-0.4
362
Normal
-0.4
448
Normal
-0.4
353
Tumor
-0.4
1016
Normal
-0.4
428
Normal
-0.4
952
Normal
-0.4
222
Normal
-0.4
955
Tumor
-0.4
954
Normal
-0.4
213
Tumor
-0.4
557
Tumor
-0.4
526
Normal
-0.4
722
Normal
-0.4
126
Normal
-0.4
1032
Normal
-0.4
1028
Normal
-0.4
232
Normal
-0.4
874
Normal
-0.4
1022
Normal
-0.4
125
Tumor
-0.4
824
Normal
-0.4
396
Normal
-0.4
514
Normal
-0.4
111
Normal
-0.4
328
Normal
-0.4
342
Normal
-0.4
192
Normal
-0.4
924
Normal
-0.4
918
Normal
-0.4
554
Normal
-0.4
868
Normal
-0.4
922
Normal
-0.4
145
Tumor
-0.4
1041
Tumor
-0.4
272
Normal
-0.4
312
Normal
-0.4
191
Tumor
-0.4
414
Normal
-0.4
546
Normal
-0.4
262
Normal
-0.4
696
Normal
-0.4
114
Normal
-0.4
627
Tumor
-0.4
723
Tumor
-0.4
214
Normal
-0.4
467
Tumor
-0.5
618
Normal
-0.5
1044
Normal
-0.5
298
Normal
-0.5
1014
Normal
-0.5
1046
Normal
-0.5
742
Normal
-0.5
721
Tumor
-0.5
635
Tumor
-0.5
423
Tumor
-0.5
498
Normal
-0.5
858
Normal
-0.5
714
Normal
-0.5
415
Tumor
-0.5
938
Normal
-0.5
862
Normal
-0.5
344
Normal
-0.5
523
Tumor
-0.5
914
Normal
-0.5
386
Normal
-0.5
864
Normal
-0.5
878
Normal
-0.5
388
Normal
-0.5
816
Normal
-0.5
488
Normal
-0.5
944
Normal
-0.5
228
Normal
-0.5
513
Tumor
-0.5
464
Normal
-0.5
982
Normal
-0.5
128
Normal
-0.5
953
Tumor
-0.5
426
Normal
-0.5
642
Normal
-0.5
926
Normal
-0.6
434
Normal
-0.6
716
Normal
-0.6
138
Normal
-0.6
366
Normal
-0.6
456
Normal
-0.6
492
Normal
-0.6
746
Normal
-0.6
491
Tumor
-0.6
481
Tumor
-0.6
628
Normal
-0.6
698
Normal
-0.6
376
Normal
-0.6
484
Normal
-0.6
394
Normal
-0.6
568
Normal
-0.6
142
Normal
-0.6
873
Tumor
-0.6
738
Normal
-0.6
392
Normal
-0.6
558
Normal
-0.6
494
Normal
-0.6
146
Normal
-0.6
424
Normal
-0.7
981
Tumor
-0.7
124
Normal
-0.7
444
Normal
-0.7
615
Tumor
-0.7
818
Normal
-0.7
136
Normal
-0.7
132
Normal
-0.7
422
Normal
-0.7
636
Normal
-0.7
866
Normal
-0.8
911
Tumor
-0.8
686
Normal
-0.8
431
Tumor
-0.8
574
Normal
-0.9
436
Normal
-0.9
564
Normal
-0.9
432
Normal
-1.0
867
Tumor
-1.5
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.