HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:11.7 nTPM
HPA Brain:13.9 nTPM
GTEx:11.7 nTPM
FANTOM5:16.7 Scaled Tags Per Million
Pig:14.0 nTPM
Mouse:18.5 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052555
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 13.9
Sample id Sample description nTPM
Hippocampus
nTPM: 12.5
1855 Male, age 76, left hemisphere 13.6
1911 Female, age 85, right hemisphere 12.9
1898 Male, age 80, left hemisphere 12.7
2529 Female, age 94, left hemisphere 12.7
2148 Female, age 91, left hemisphere 12.5
2621 Female, age 67, right hemisphere 10.6
Dentate gyrus
nTPM: 12.9
2528 Male, age 74, both hemispheres 14.6
2010 Male, age 76, both hemispheres 13.3
2531 Female, age 67, both hemispheres 13.2
1927 Female, age 91, both hemispheres 12.6
2246 Female, age 85, both hemispheres 12.4
2530 Female, age 94, left hemisphere 11.5
Entorhinal gyrus
nTPM: 11.8
1938 Female, age 85, left hemisphere 12.6
1787 Male, age 76, left hemisphere 12.1
2117 Female, age 91, right hemisphere 12.1
2686 Male, age 75, right hemisphere 11.9
2764 Male, age 80, right hemisphere 11.4
2613 Female, age 94, left hemisphere 10.8
Hippocampus, CA1
nTPM: 12.9
2045 Male, age 76, both hemispheres 16.2
2082 Female, age 91, right hemisphere 14.9
1873 Female, age 85, both hemispheres 13.5
2749 Male, age 80, left hemisphere 9.9
2527 Male, age 74, both hemispheres 9.7
Hippocampus, CA2
nTPM: 12.4
2113 Female, age 91, right hemisphere 13.9
1940 Female, age 85, left hemisphere 13.8
2249 Male, age 74, both hemispheres 13.2
2437 Female, age 94, left hemisphere 11.8
1892 Male, age 76, both hemispheres 10.7
1963 Male, age 80, left hemisphere 10.7
Hippocampus, CA3
nTPM: 12.2
2436 Male, age 74, both hemispheres 15.2
2620 Female, age 94, left hemisphere 13.7
1891 Female, age 85, both hemispheres 11.3
2861 Female, age 67, both hemispheres 11.3
2137 Male, age 80, left hemisphere 11.2
1867 Male, age 76, both hemispheres 10.8
Parahippocampal cortex
nTPM: 12.1
1850 Male, age 80, both hemispheres 13.7
2018 Male, age 76, both hemispheres 13.7
2693 Female, age 94, both hemispheres 12.9
1933 Female, age 85, both hemispheres 12.6
2250 Female, age 67, right hemisphere 12.6
2532 Female, age 72, left hemisphere 11.7
2622 Female, age 67, right hemisphere 11.7
2245 Female, age 91, both hemispheres 11.4
1990 Female, age 91, right hemisphere 10.4
2692 Male, age 74, both hemispheres 10.3
Perirhinal gyrus
nTPM: 13.9
2848 Male, age 76, right hemisphere 15.9
1841 Female, age 85, right hemisphere 14.2
1794 Male, age 80, right hemisphere 13.5
2521 Female, age 94, right hemisphere 13.0
1847 Female, age 91, left hemisphere 12.6
Subiculum
nTPM: 11.3
2729 Female, age 91, right hemisphere 14.1
1901 Male, age 80, both hemispheres 11.2
2042 Male, age 76, both hemispheres 11.1
1977 Female, age 85, both hemispheres 10.8
2438 Female, age 94, left hemisphere 10.6
2619 Male, age 74, both hemispheres 10.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.7
Samples: 197

Max nTPM: 39.1
Min nTPM: 4.9
Std nTPM: 4.0
Median nTPM: 10.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 39.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 28.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 23.9
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 23.4
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 22.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 21.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 21.4
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 20.3
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 18.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 18.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 18.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 16.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.7
FF:10153-102I9 76 years, female 16.8
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 14.0
Pig sample Sample description nTPM
Subiculum
nTPM: 11.6
Samples: 4

Max nTPM: 13.7
Min nTPM: 10.1
Sample A Female 10.5
Sample B Female 10.1
Sample C Male 12.1
Sample D Male 13.7
Dorsal hippocampus
nTPM: 14.0
Samples: 4

Max nTPM: 15.2
Min nTPM: 11.6
Sample A Female 15.2
Sample B Female 15.2
Sample C Male 14.0
Sample D Male 11.6
Entorhinal cortex
nTPM: 10.1
Samples: 4

Max nTPM: 12.5
Min nTPM: 8.2
Sample A Female 8.4
Sample B Female 8.2
Sample C Male 11.3
Sample D Male 12.5
Ventral hippocampus
nTPM: 13.2
Samples: 4

Max nTPM: 14.4
Min nTPM: 10.6
Sample A Female 13.9
Sample B Female 10.6
Sample C Male 14.4
Sample D Male 13.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 18.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.5
Samples: 4

Max nTPM: 17.2
Min nTPM: 11.4
Sample A Male 14.6
Sample B Male 14.9
Sample C Female 17.2
Sample D Female 11.4
Hippocampal formation
nTPM: 18.5
Samples: 4

Max nTPM: 22.7
Min nTPM: 15.4
Sample A Male 15.4
Sample B Male 17.0
Sample C Female 18.9
Sample D Female 22.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70303731 Antisense, RP_050609_02_C03, Mouse strain C57BL/6J (56 days, male) 0.0

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