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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
321.2
nTPM
FANTOM5:
294.7
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
321.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 274.9
2188
Female, age 91, both hemispheres
303.4
2090
Male, age 80, both hemispheres
293.9
2301
Female, age 85, both hemispheres
275.0
1984
Male, age 76, both hemispheres
227.2
Dorsal cochlear nucleus nTPM: 261.2
2187
Female, age 91, both hemispheres
315.6
2802
Male, age 74, right hemisphere
276.9
2058
Male, age 76, both hemispheres
271.6
2370
Male, age 61, both hemispheres
230.0
2378
Male, age 80, both hemispheres
211.9
Dorsal tegmental nucleus nTPM: 285.3
2083
Male, age 80, both hemispheres
383.4
2326
Male, age 74, both hemispheres
257.1
2358
Male, age 61, both hemispheres
253.5
1936
Male, age 76, left hemisphere
246.9
Dorsolateral tegmental area nTPM: 276.5
2337
Male, age 61, both hemispheres
309.6
2654
Male, age 80, both hemispheres
302.3
2751
Female, age 85, both hemispheres
295.5
2141
Male, age 76, both hemispheres
272.9
2360
Male, age 74, both hemispheres
202.0
Kolliker-Fuse nucleus nTPM: 294.5
2163
Male, age 80, both hemispheres
301.4
2793
Female, age 91, left hemisphere
294.5
2315
Male, age 76, right hemisphere
287.7
Lateral lemniscal nuclei nTPM: 252.5
2453
Male, age 74, right hemisphere
309.3
2169
Male, age 76, both hemispheres
297.5
2320
Female, age 91, left hemisphere
248.9
2746
Female, age 85, left hemisphere
246.3
2036
Male, age 80, both hemispheres
160.6
Lateral parabrachial nucleus nTPM: 274.2
2139
Female, age 85, right hemisphere
340.6
2792
Male, age 76, both hemispheres
287.1
2013
Male, age 80, both hemispheres
243.0
2790
Male, age 61, both hemispheres
226.3
Lateral vestibular nucleus nTPM: 295.1
2311
Male, age 80, both hemispheres
302.1
2184
Male, age 76, both hemispheres
288.1
Locus coeruleus nTPM: 317.8
2123
Female, age 91, both hemispheres
368.6
2720
Male, age 74, both hemispheres
334.5
2014
Male, age 55, unknown
326.9
2788
Male, age 74, unknown
309.3
1980
Male, age 76, both hemispheres
301.9
2162
Male, age 80, both hemispheres
295.6
2317
Female, age 72, unknown
287.3
Medial parabrachial nucleus nTPM: 287.7
2170
Female, age 91, both hemispheres
328.7
2156
Male, age 61, both hemispheres
296.2
2854
Male, age 80, both hemispheres
276.2
2463
Female, age 85, right hemisphere
273.6
2786
Male, age 76, both hemispheres
263.8
Medial periolivary nuclei nTPM: 282.7
2171
Female, age 85, both hemispheres
327.4
2063
Male, age 76, both hemispheres
323.8
2081
Male, age 80, both hemispheres
273.1
2458
Female, age 91, both hemispheres
269.4
2791
Male, age 74, right hemisphere
219.7
Motor facial nucleus nTPM: 296.4
2062
Male, age 76, both hemispheres
346.6
2126
Male, age 61, both hemispheres
332.3
2697
Female, age 85, both hemispheres
300.8
2365
Male, age 74, right hemisphere
288.1
2327
Male, age 80, both hemispheres
282.6
2795
Female, age 91, both hemispheres
227.9
Motor trigeminal nucleus nTPM: 287.3
2079
Male, age 80, both hemispheres
324.6
2335
Male, age 61, both hemispheres
302.9
2309
Male, age 76, both hemispheres
277.8
2321
Female, age 91, both hemispheres
270.7
2560
Male, age 74, both hemispheres
260.8
Nuclei of the trapezoid body nTPM: 296.0
1983
Male, age 76, both hemispheres
355.3
2159
Male, age 61, both hemispheres
330.5
2735
Female, age 85, both hemispheres
290.1
2166
Male, age 80, both hemispheres
277.9
2368
Female, age 91, both hemispheres
226.5
Nucleus raphe magnus nTPM: 314.6
2160
Male, age 61, both hemispheres
391.6
2455
Male, age 74, both hemispheres
353.6
2172
Female, age 85, both hemispheres
343.4
2328
Male, age 80, both hemispheres
303.3
2051
Male, age 76, both hemispheres
255.1
2459
Female, age 91, both hemispheres
240.5
Paramedian reticular nucleus nTPM: 285.2
2057
Male, age 80, both hemispheres
302.5
2052
Male, age 76, both hemispheres
282.5
2050
Female, age 85, both hemispheres
279.5
2313
Male, age 61, both hemispheres
276.1
Pedunculopontine tegmental nucleus nTPM: 281.0
2334
Male, age 80, both hemispheres
296.1
2338
Male, age 61, both hemispheres
290.4
1921
Female, age 85, both hemispheres
256.5
Pontine nuclei nTPM: 319.3
2787
Female, age 85, both hemispheres
410.4
1863
Male, age 55, unknown
351.2
2727
Male, age 61, right hemisphere
336.6
1968
Male, age 76, left hemisphere
309.2
2454
Male, age 74, left hemisphere
307.9
2109
Female, age 72, unknown
301.4
2115
Male, age 80, left hemisphere
278.6
2319
Female, age 91, both hemispheres
258.7
Pontine raphe nucleus nTPM: 303.1
2122
Female, age 85, midline
323.8
2853
Male, age 76, midline
282.3
Posteroventral cochlear nucleus nTPM: 273.5
2135
Female, age 91, both hemispheres
303.8
2752
Female, age 85, both hemispheres
302.0
2070
Male, age 76, both hemispheres
293.1
2341
Male, age 80, both hemispheres
256.6
2371
Male, age 61, both hemispheres
211.9
Principal sensory trigeminal nucleus nTPM: 281.6
2158
Male, age 61, both hemispheres
339.9
2367
Female, age 91, left hemisphere
278.5
2324
Male, age 76, both hemispheres
270.2
2008
Male, age 80, left hemisphere
237.6
Reticular pontine nucleus, caudal nTPM: 321.2
2457
Female, age 91, both hemispheres
364.0
2092
Male, age 76, both hemispheres
321.4
2559
Male, age 74, both hemispheres
302.9
2332
Male, age 80, right hemisphere
296.3
Reticular pontine nucleus, oral nTPM: 286.6
2366
Female, age 91, both hemispheres
301.6
1939
Male, age 80, both hemispheres
293.6
2361
Male, age 74, both hemispheres
290.1
2167
Male, age 76, both hemispheres
283.0
2012
Female, age 85, both hemispheres
264.5
Reticulotegmental nucleus nTPM: 303.8
2322
Female, age 91, both hemispheres
321.5
2452
Male, age 74, both hemispheres
303.1
2325
Male, age 76, both hemispheres
298.3
2333
Male, age 80, both hemispheres
292.2
Spinal trigeminal nucleus, oral nTPM: 279.8
2164
Male, age 80, both hemispheres
325.9
1978
Male, age 76, both hemispheres
262.0
2737
Female, age 85, both hemispheres
251.5
Subcoeruleus area nTPM: 276.6
1958
Male, age 80, both hemispheres
283.2
2323
Female, age 91, left hemisphere
282.3
2369
Female, age 85, left hemisphere
279.2
2451
Male, age 74, both hemispheres
275.2
2089
Male, age 76, left hemisphere
263.3
Superior olive nTPM: 264.5
1875
Female, age 85, both hemispheres
287.7
2020
Male, age 76, both hemispheres
282.6
2329
Male, age 80, right hemisphere
273.4
2364
Male, age 74, right hemisphere
246.6
2561
Female, age 91, both hemispheres
232.2
Ventral periolivary nuclei nTPM: 289.0
2165
Male, age 80, both hemispheres
347.0
2130
Female, age 85, both hemispheres
311.2
2023
Male, age 76, both hemispheres
288.3
2794
Female, age 91, left hemisphere
209.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 271.4
2449
Male, age 74, both hemispheres
318.7
1959
Male, age 76, both hemispheres
274.7
2840
Female, age 85, both hemispheres
270.4
2161
Male, age 80, both hemispheres
266.1
2359
Male, age 61, both hemispheres
262.4
2456
Female, age 91, both hemispheres
236.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
