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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZHX2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
58.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
55.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
36.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
34.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
34.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
29.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
29.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
28.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
28.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
27.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
27.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
26.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
25.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
24.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
24.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
23.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
23.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
23.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
23.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
22.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
22.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
22.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
22.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
22.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
21.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
21.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
20.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
20.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
20.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
20.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
20.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
19.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
19.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
19.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
19.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
18.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
18.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
18.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
18.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
18.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
17.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
17.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
17.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
17.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
17.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
17.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
17.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
17.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
17.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
16.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
16.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
16.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
16.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
16.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
16.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
16.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
16.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
16.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
16.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
16.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
15.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
15.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
15.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
15.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
15.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
15.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
15.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
15.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
15.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
15.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
15.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
14.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
14.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
14.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
14.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
14.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
14.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
14.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
14.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
14.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
14.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
14.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
14.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
14.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
13.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
13.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
13.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
13.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
13.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
13.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
13.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
13.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
13.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
13.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
12.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
12.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
12.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
12.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
12.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
12.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
12.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
12.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
12.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
12.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
12.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
12.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
12.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
12.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
11.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
11.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
11.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
11.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
11.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
11.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
11.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
11.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
11.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
11.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
11.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
11.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
11.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
11.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
10.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
10.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
10.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
10.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
10.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
10.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
10.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
10.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
10.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
10.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
10.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
10.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
10.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
10.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
10.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
10.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
10.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
10.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
10.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
10.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
10.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
9.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
9.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
9.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
9.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
9.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
9.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
9.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
9.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
9.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
9.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
9.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
9.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
9.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
9.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
9.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
9.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
9.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
9.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
9.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
9.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
9.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
9.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
9.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
9.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
9.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
8.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
8.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
8.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
8.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
8.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
8.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
8.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
8.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
8.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
8.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
8.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
8.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
8.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
8.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
8.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
8.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
8.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
8.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
8.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
8.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
8.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
7.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
7.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
7.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
7.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
7.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
7.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
7.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
7.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
7.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
7.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
7.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
7.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
7.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
7.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
7.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
7.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
7.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
7.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
7.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
7.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
7.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
7.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
7.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
7.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
7.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
7.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
7.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
6.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
6.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
6.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
6.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
6.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
6.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
6.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
6.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
6.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
6.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
6.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
6.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
6.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
6.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
6.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
6.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
6.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
6.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
6.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
6.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
6.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
6.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
6.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
6.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
6.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
5.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
5.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
5.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
5.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
5.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
5.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
5.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
5.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
5.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
5.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
5.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
4.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
4.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
4.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
4.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
4.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
4.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
4.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
4.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
4.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
4.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
4.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
4.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
4.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
4.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
4.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
4.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
4.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
4.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
4.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
3.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
3.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
3.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
3.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
3.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
3.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
3.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
3.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
3.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
3.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
3.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
3.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
2.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
2.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
2.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZHX2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.3
Number of samples
231
Samples
Sample
Description
TPM
DO50785
0 years, male, NA, stage:4, dead, 90 days
46.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
33.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
29.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
26.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
25.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
25.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
25.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
23.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
23.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
22.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
21.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
21.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
21.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
20.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
20.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
19.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
19.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
18.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
18.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
18.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
18.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
17.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
17.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
17.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
16.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
16.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
16.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
15.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
15.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
15.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
15.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
15.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
15.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
15.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
15.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
14.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
14.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
14.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
14.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
14.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
14.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
14.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
14.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
14.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
14.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
13.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
13.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
13.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
13.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
13.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
13.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
13.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
13.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
13.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
13.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
13.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
13.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
12.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
12.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
12.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
12.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
12.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
12.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
12.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
11.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
11.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
11.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
11.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
11.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
11.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
11.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
11.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
11.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
11.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
11.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
11.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
10.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
10.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
10.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
10.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
10.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
10.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
10.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
10.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
10.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
10.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
10.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
10.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
10.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
10.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
10.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
10.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
9.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
9.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
9.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
9.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
9.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
9.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
9.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
9.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
9.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
9.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
9.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
9.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
9.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
9.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
9.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
9.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
9.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
9.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
9.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
9.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
9.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
9.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
9.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
9.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
8.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
8.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
8.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
8.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
8.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
8.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
8.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
8.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
8.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
8.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
8.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
8.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
8.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
8.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
8.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
8.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
8.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
8.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
8.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
8.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
8.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
8.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
8.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
8.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
7.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
7.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
7.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
7.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
7.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
7.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
7.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
7.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
7.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
7.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
7.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
7.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
7.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
7.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
7.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
7.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
6.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
6.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
6.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
6.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
6.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
6.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
6.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
6.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
6.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
6.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
6.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
6.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
6.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
6.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
6.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
6.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
6.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
6.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
6.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
6.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
6.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
6.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
6.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
6.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
5.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
5.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
5.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
5.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
5.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
5.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
5.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
5.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
5.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
5.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
5.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
5.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
5.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
5.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
5.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
5.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
4.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
4.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
4.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
4.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
4.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
4.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
4.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
4.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
4.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
4.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
4.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
4.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
4.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
3.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
3.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
3.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
3.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
3.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
3.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
3.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
567
Tumor
1.5
663
Tumor
1.4
537
Tumor
1.4
685
Tumor
1.0
367
Tumor
1.0
983
Tumor
0.9
1041
Tumor
0.8
135
Tumor
0.8
413
Tumor
0.8
743
Tumor
0.7
375
Tumor
0.7
965
Tumor
0.7
815
Tumor
0.7
285
Tumor
0.7
331
Tumor
0.7
231
Tumor
0.6
545
Tumor
0.6
877
Tumor
0.6
493
Tumor
0.6
851
Tumor
0.5
427
Tumor
0.5
313
Tumor
0.5
911
Tumor
0.5
267
Tumor
0.5
967
Tumor
0.5
737
Tumor
0.5
477
Tumor
0.4
131
Tumor
0.4
513
Tumor
0.4
445
Tumor
0.4
937
Tumor
0.4
533
Tumor
0.4
953
Tumor
0.3
665
Tumor
0.3
497
Tumor
0.3
257
Tumor
0.3
873
Tumor
0.3
127
Tumor
0.3
211
Tumor
0.3
661
Tumor
0.3
715
Tumor
0.3
351
Tumor
0.3
813
Tumor
0.3
963
Tumor
0.3
823
Tumor
0.3
915
Tumor
0.3
471
Tumor
0.2
387
Tumor
0.2
431
Tumor
0.2
483
Tumor
0.2
867
Tumor
0.2
271
Tumor
0.2
881
Tumor
0.2
557
Tumor
0.2
125
Tumor
0.2
112
Tumor
0.2
785
Tumor
0.2
524
Normal
0.2
385
Tumor
0.2
671
Tumor
0.2
461
Tumor
0.2
777
Tumor
0.2
523
Tumor
0.2
525
Tumor
0.2
478
Normal
0.2
482
Normal
0.1
484
Normal
0.1
297
Tumor
0.1
535
Tumor
0.1
977
Tumor
0.1
957
Tumor
0.1
1045
Tumor
0.1
451
Tumor
0.1
443
Tumor
0.1
938
Normal
0.1
861
Tumor
0.1
423
Tumor
0.1
481
Tumor
0.1
311
Tumor
0.1
527
Tumor
0.1
463
Tumor
0.1
447
Tumor
0.1
472
Normal
0.1
617
Tumor
0.1
514
Normal
0.1
536
Normal
0.1
425
Tumor
0.1
395
Tumor
0.0
883
Tumor
0.0
756
Normal
0.0
534
Normal
0.0
498
Normal
0.0
666
Normal
0.0
546
Normal
0.0
554
Normal
0.0
1025
Tumor
0.0
465
Tumor
0.0
516
Normal
0.0
672
Normal
0.0
171
Tumor
0.0
818
Normal
0.0
858
Normal
0.0
921
Tumor
0.0
538
Normal
0.0
824
Normal
0.0
1046
Normal
0.0
648
Normal
0.0
882
Normal
0.0
1031
Tumor
0.0
391
Tumor
0.0
786
Normal
0.0
943
Tumor
0.0
161
Tumor
0.0
261
Tumor
0.0
925
Tumor
0.0
627
Tumor
0.0
187
Tumor
0.0
958
Normal
0.0
955
Tumor
0.0
916
Normal
0.0
421
Tumor
0.0
553
Tumor
0.0
137
Tumor
0.0
878
Normal
0.0
1044
Normal
0.0
314
Normal
0.0
355
Tumor
0.0
976
Normal
0.0
328
Normal
0.0
113
Tumor
0.0
526
Normal
0.0
415
Tumor
0.0
327
Tumor
0.0
922
Normal
0.0
852
Normal
0.0
384
Normal
0.0
696
Normal
0.0
433
Tumor
0.0
664
Normal
0.0
1014
Normal
0.0
968
Normal
0.0
474
Normal
0.0
662
Normal
0.0
142
Normal
0.0
721
Tumor
0.0
518
Normal
0.0
517
Tumor
0.0
912
Normal
0.0
364
Normal
0.0
123
Tumor
0.0
814
Normal
-0.1
428
Normal
-0.1
376
Normal
-0.1
464
Normal
-0.1
964
Normal
-0.1
951
Tumor
-0.1
444
Normal
-0.1
857
Tumor
-0.1
884
Normal
-0.1
448
Normal
-0.1
635
Tumor
-0.1
913
Tumor
-0.1
744
Normal
-0.1
716
Normal
-0.1
874
Normal
-0.1
745
Tumor
-0.1
742
Normal
-0.1
332
Normal
-0.1
212
Normal
-0.1
488
Normal
-0.1
343
Tumor
-0.1
1015
Tumor
-0.1
515
Tumor
-0.1
954
Normal
-0.1
926
Normal
-0.1
424
Normal
-0.1
426
Normal
-0.1
636
Normal
-0.1
456
Normal
-0.1
365
Tumor
-0.1
714
Normal
-0.1
462
Normal
-0.1
1032
Normal
-0.1
778
Normal
-0.1
944
Normal
-0.1
723
Tumor
-0.1
923
Tumor
-0.1
223
Tumor
-0.1
924
Normal
-0.1
698
Normal
-0.1
412
Normal
-0.1
572
Normal
-0.1
192
Normal
-0.1
383
Tumor
-0.1
436
Normal
-0.1
473
Tumor
-0.1
356
Normal
-0.1
966
Normal
-0.1
492
Normal
-0.1
863
Tumor
-0.1
628
Normal
-0.1
494
Normal
-0.1
446
Normal
-0.1
361
Tumor
-0.1
615
Tumor
-0.1
728
Normal
-0.1
363
Tumor
-0.1
455
Tumor
-0.1
146
Normal
-0.1
224
Normal
-0.1
866
Normal
-0.1
132
Normal
-0.1
394
Normal
-0.1
574
Normal
-0.1
528
Normal
-0.1
221
Tumor
-0.1
1042
Normal
-0.1
414
Normal
-0.1
746
Normal
-0.1
1043
Tumor
-0.1
272
Normal
-0.2
816
Normal
-0.2
868
Normal
-0.2
268
Normal
-0.2
1028
Normal
-0.2
466
Normal
-0.2
1022
Normal
-0.2
741
Tumor
-0.2
984
Normal
-0.2
981
Tumor
-0.2
724
Normal
-0.2
956
Normal
-0.2
865
Tumor
-0.2
422
Normal
-0.2
918
Normal
-0.2
697
Tumor
-0.2
196
Normal
-0.2
468
Normal
-0.2
366
Normal
-0.2
722
Normal
-0.2
1021
Tumor
-0.2
312
Normal
-0.2
232
Normal
-0.2
284
Normal
-0.2
862
Normal
-0.2
416
Normal
-0.2
1026
Normal
-0.2
686
Normal
-0.2
111
Normal
-0.2
148
Normal
-0.2
258
Normal
-0.2
188
Normal
-0.2
195
Tumor
-0.2
298
Normal
-0.2
185
Tumor
-0.2
563
Tumor
-0.2
286
Normal
-0.2
147
Tumor
-0.2
186
Normal
-0.2
228
Normal
-0.2
396
Normal
-0.2
191
Tumor
-0.2
435
Tumor
-0.2
558
Normal
-0.2
755
Tumor
-0.2
126
Normal
-0.2
618
Normal
-0.2
982
Normal
-0.2
138
Normal
-0.2
388
Normal
-0.2
392
Normal
-0.2
864
Normal
-0.2
352
Normal
-0.2
278
Normal
-0.2
162
Normal
-0.2
342
Normal
-0.2
616
Normal
-0.2
114
Normal
-0.2
952
Normal
-0.2
353
Tumor
-0.2
128
Normal
-0.2
978
Normal
-0.2
145
Tumor
-0.2
368
Normal
-0.2
218
Normal
-0.2
354
Normal
-0.2
434
Normal
-0.2
222
Normal
-0.2
467
Tumor
-0.2
262
Normal
-0.2
975
Tumor
-0.2
487
Tumor
-0.3
386
Normal
-0.3
362
Normal
-0.3
568
Normal
-0.3
914
Normal
-0.3
564
Normal
-0.3
738
Normal
-0.3
1016
Normal
-0.3
124
Normal
-0.3
217
Tumor
-0.3
172
Normal
-0.3
642
Normal
-0.3
357
Tumor
-0.3
432
Normal
-0.3
136
Normal
-0.3
227
Tumor
-0.3
452
Normal
-0.3
727
Tumor
-0.3
141
Tumor
-0.3
917
Tumor
-0.3
277
Tumor
-0.3
695
Tumor
-0.3
393
Tumor
-0.3
713
Tumor
-0.3
358
Normal
-0.4
344
Normal
-0.4
411
Tumor
-0.4
1013
Tumor
-0.4
573
Tumor
-0.4
214
Normal
-0.4
641
Tumor
-0.4
1027
Tumor
-0.5
213
Tumor
-0.5
341
Tumor
-0.5
647
Tumor
-0.5
817
Tumor
-0.5
283
Tumor
-0.5
491
Tumor
-0.6
571
Tumor
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.