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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
175.1
nTPM
GTEx:
175.1
nTPM
FANTOM5:
547.6
Scaled Tags Per Million
Pig:
245.4
nTPM
Mouse:
511.5
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
175.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 175.1
Samples: 105
Max nTPM: 344.0
Min nTPM: 32.5
Std nTPM: 63.5
Median nTPM:
218_1
71 years, female
344.0
319_1
81 years, male
306.8
377_1
82 years, female
298.6
425_1
59 years, female
281.3
163_1
78 years, male
273.0
352_1
62 years, male
270.2
316_1
62 years, male
256.7
321_1
62 years, female
255.9
386_1
76 years, male
254.1
292_1
71 years, male
250.8
376_1
75 years, female
249.8
354_1
81 years, female
248.8
322_1
76 years, male
248.2
406_1
79 years, male
246.8
350_1
84 years, female
246.4
356_1
87 years, female
246.4
243_1
75 years, male
245.5
318_1
68 years, male
243.4
379_1
60 years, male
239.2
349_1
83 years, male
237.0
177_1
74 years, male
231.1
335_1
73 years, female
231.0
293_1
68 years, female
230.7
394_1
75 years, female
230.6
375_1
74 years, female
228.3
320_1
89 years, female
225.5
355_1
70 years, female
225.2
172_1
72 years, female
222.8
480_1
63 years, male
219.6
251_1
78 years, male
218.7
237_1
82 years, male
218.3
347_1
72 years, male
217.7
447_1
81 years, male
217.7
189_1
76 years, male
211.4
405_1
91 years, male
210.1
389_1
86 years, female
209.4
246_1
77 years, male
208.6
286_1
68 years, female
204.5
353_1
82 years, female
203.2
266_1
85 years, male
200.8
317_1
60 years, male
200.6
384_1
83 years, male
199.6
404_1
82 years, female
196.5
229_1
69 years, female
195.3
517_1
88 years, male
194.1
173_1
67 years, male
192.9
6_1
73 years, female
190.1
452_1
88 years, female
189.7
503_1
68 years, male
188.8
295_1
61 years, female
186.8
351_1
91 years, male
186.4
506_1
65 years, male
183.9
348_1
84 years, male
183.7
254_1
77 years, female
182.8
526_1
61 years, male
180.0
264_1
73 years, female
173.7
518_1
75 years, female
173.0
291_1
76 years, male
168.7
468_1
89 years, male
167.2
324_1
76 years, male
164.9
265_1
87 years, male
160.1
17_1
71 years, male
158.1
307_1
66 years, female
157.2
4_1
88 years, female
151.8
396_1
62 years, male
150.0
99_1
64 years, male
149.1
311_1
78 years, male
148.0
499_1
55 years, female
147.0
153_1
70 years, female
146.2
18_1
88 years, male
144.7
35_1
74 years, female
139.3
217_1
76 years, male
137.3
137_1
83 years, male
130.5
288_1
66 years, female
130.3
145_1
84 years, male
129.0
115_1
83 years, male
128.8
120_1
70 years, female
128.5
81_1
67 years, male
120.3
313_1
79 years, female
119.5
41_1
94 years, female
117.3
2_1
77 years, female
117.1
9_1
66 years, female
116.8
415_1
77 years, female
113.5
315_1
62 years, female
113.0
142_1
61 years, female
112.5
314_1
67 years, male
110.8
109_1
81 years, female
108.0
126_1
63 years, male
107.8
308_1
70 years, female
105.6
414_1
84 years, female
102.6
466_1
57 years, female
101.7
42_1
85 years, male
101.5
117_1
61 years, male
99.7
495_1
57 years, female
99.7
32_1
67 years, male
91.0
139_1
64 years, female
89.7
43_1
64 years, female
88.8
501_1
88 years, male
87.2
162_1
79 years, female
86.6
119_1
70 years, female
73.9
89_1
63 years, male
61.6
413_1
59 years, female
60.4
490_1
67 years, female
55.4
149_1
88 years, male
52.3
491_1
89 years, female
32.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.