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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
78.3
nTPM
GTEx:
78.3
nTPM
FANTOM5:
49.2
Scaled Tags Per Million
Pig:
45.2
nTPM
Mouse:
101.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
78.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 78.3
Samples: 105
Max nTPM: 171.1
Min nTPM: 28.3
Std nTPM: 23.4
Median nTPM:
218_1
71 years, female
171.1
379_1
60 years, male
123.8
99_1
64 years, male
122.8
237_1
82 years, male
119.8
42_1
85 years, male
109.9
319_1
81 years, male
109.5
354_1
81 years, female
108.3
394_1
75 years, female
107.2
375_1
74 years, female
106.6
317_1
60 years, male
106.5
349_1
83 years, male
105.6
335_1
73 years, female
104.8
506_1
65 years, male
103.8
350_1
84 years, female
103.5
352_1
62 years, male
100.7
264_1
73 years, female
100.4
386_1
76 years, male
100.2
172_1
72 years, female
99.7
452_1
88 years, female
99.0
377_1
82 years, female
98.6
163_1
78 years, male
97.8
35_1
74 years, female
97.4
376_1
75 years, female
97.3
321_1
62 years, female
96.9
347_1
72 years, male
96.9
320_1
89 years, female
96.7
356_1
87 years, female
96.5
351_1
91 years, male
96.0
243_1
75 years, male
95.7
447_1
81 years, male
95.4
355_1
70 years, female
95.3
6_1
73 years, female
93.8
286_1
68 years, female
93.1
384_1
83 years, male
92.4
173_1
67 years, male
91.2
322_1
76 years, male
89.7
406_1
79 years, male
89.1
293_1
68 years, female
88.8
318_1
68 years, male
88.8
503_1
68 years, male
88.8
177_1
74 years, male
86.2
316_1
62 years, male
85.7
295_1
61 years, female
85.6
353_1
82 years, female
84.3
405_1
91 years, male
82.3
137_1
83 years, male
81.7
389_1
86 years, female
81.3
425_1
59 years, female
81.0
404_1
82 years, female
79.1
41_1
94 years, female
79.0
292_1
71 years, male
78.8
4_1
88 years, female
78.2
348_1
84 years, male
77.3
480_1
63 years, male
77.3
396_1
62 years, male
76.8
517_1
88 years, male
76.3
313_1
79 years, female
75.0
115_1
83 years, male
74.7
229_1
69 years, female
74.0
189_1
76 years, male
72.8
291_1
76 years, male
72.8
251_1
78 years, male
72.3
217_1
76 years, male
71.8
153_1
70 years, female
69.7
518_1
75 years, female
69.6
246_1
77 years, male
69.4
109_1
81 years, female
69.0
265_1
87 years, male
68.3
526_1
61 years, male
68.3
120_1
70 years, female
66.4
314_1
67 years, male
66.3
145_1
84 years, male
66.2
288_1
66 years, female
65.4
17_1
71 years, male
64.8
499_1
55 years, female
64.6
254_1
77 years, female
64.2
266_1
85 years, male
63.7
307_1
66 years, female
63.2
324_1
76 years, male
62.9
117_1
61 years, male
61.3
468_1
89 years, male
61.2
142_1
61 years, female
60.3
18_1
88 years, male
60.2
119_1
70 years, female
59.5
311_1
78 years, male
59.0
315_1
62 years, female
58.7
126_1
63 years, male
58.0
308_1
70 years, female
57.8
9_1
66 years, female
55.6
2_1
77 years, female
50.9
162_1
79 years, female
50.8
43_1
64 years, female
50.3
81_1
67 years, male
50.2
139_1
64 years, female
49.0
32_1
67 years, male
47.7
495_1
57 years, female
46.3
466_1
57 years, female
45.0
89_1
63 years, male
41.4
415_1
77 years, female
41.1
501_1
88 years, male
41.0
414_1
84 years, female
39.1
490_1
67 years, female
39.0
149_1
88 years, male
34.4
413_1
59 years, female
31.8
491_1
89 years, female
28.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
