HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Neuronal projections: Low
Synapses: Not detected
RNA expressioni
Consensus:2.0 nTPM
HPA Brain:8.7 nTPM
GTEx:2.0 nTPM
FANTOM5:1.9 Scaled Tags Per Million
Pig:24.5 nTPM
Mouse:9.4 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Extended tissue profilei , antibody HPA048628
Glial cells Low
Neuronal cells Not detected
Neuronal projections Low
Synapses Not detected

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048628
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 8.7
Sample id Sample description nTPM
Hippocampus
nTPM: 8.0
2621 Female, age 67, right hemisphere 11.0
1898 Male, age 80, left hemisphere 10.1
1855 Male, age 76, left hemisphere 8.2
2148 Female, age 91, left hemisphere 7.3
1911 Female, age 85, right hemisphere 5.7
2529 Female, age 94, left hemisphere 5.6
Dentate gyrus
nTPM: 8.7
2530 Female, age 94, left hemisphere 16.9
1927 Female, age 91, both hemispheres 12.4
2010 Male, age 76, both hemispheres 12.4
2246 Female, age 85, both hemispheres 4.2
2528 Male, age 74, both hemispheres 3.7
2531 Female, age 67, both hemispheres 2.4
Entorhinal gyrus
nTPM: 3.4
2613 Female, age 94, left hemisphere 6.6
1938 Female, age 85, left hemisphere 3.9
2764 Male, age 80, right hemisphere 3.8
2686 Male, age 75, right hemisphere 2.7
1787 Male, age 76, left hemisphere 1.9
2117 Female, age 91, right hemisphere 1.4
Hippocampus, CA1
nTPM: 7.6
2749 Male, age 80, left hemisphere 16.7
1873 Female, age 85, both hemispheres 10.3
2527 Male, age 74, both hemispheres 6.5
2045 Male, age 76, both hemispheres 2.1
2082 Female, age 91, right hemisphere 2.1
Hippocampus, CA2
nTPM: 8.4
1963 Male, age 80, left hemisphere 24.7
1892 Male, age 76, both hemispheres 10.0
2249 Male, age 74, both hemispheres 6.4
2437 Female, age 94, left hemisphere 5.1
2113 Female, age 91, right hemisphere 2.5
1940 Female, age 85, left hemisphere 1.7
Hippocampus, CA3
nTPM: 5.9
2137 Male, age 80, left hemisphere 11.4
1867 Male, age 76, both hemispheres 8.9
2861 Female, age 67, both hemispheres 6.2
2436 Male, age 74, both hemispheres 3.8
2620 Female, age 94, left hemisphere 2.5
1891 Female, age 85, both hemispheres 2.4
Parahippocampal cortex
nTPM: 2.8
2018 Male, age 76, both hemispheres 5.4
2245 Female, age 91, both hemispheres 3.7
2532 Female, age 72, left hemisphere 3.1
1990 Female, age 91, right hemisphere 3.0
2622 Female, age 67, right hemisphere 2.7
1933 Female, age 85, both hemispheres 2.6
2250 Female, age 67, right hemisphere 2.4
1850 Male, age 80, both hemispheres 2.2
2692 Male, age 74, both hemispheres 1.8
2693 Female, age 94, both hemispheres 1.2
Perirhinal gyrus
nTPM: 2.0
1847 Female, age 91, left hemisphere 4.1
1794 Male, age 80, right hemisphere 2.4
1841 Female, age 85, right hemisphere 1.7
2521 Female, age 94, right hemisphere 1.2
2848 Male, age 76, right hemisphere 0.6
Subiculum
nTPM: 3.3
1901 Male, age 80, both hemispheres 5.7
2042 Male, age 76, both hemispheres 4.5
2438 Female, age 94, left hemisphere 3.7
2729 Female, age 91, right hemisphere 2.3
1977 Female, age 85, both hemispheres 2.2
2619 Male, age 74, both hemispheres 1.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 2.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.0
Samples: 197

Max nTPM: 15.7
Min nTPM: 0.0
Std nTPM: 2.4
Median nTPM: 1.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 15.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 12.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 12.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 9.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 8.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 7.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 7.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 7.5
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 7.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 7.0
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 6.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.9
FF:10169-103B7 60 years, female 3.1
FF:10153-102I9 76 years, female 0.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 24.5
Pig sample Sample description nTPM
Subiculum
nTPM: 2.3
Samples: 4

Max nTPM: 5.0
Min nTPM: 1.0
Sample A Female 1.6
Sample B Female 1.4
Sample C Male 5.0
Sample D Male 1.0
Dorsal hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 31.5
Min nTPM: 13.7
Sample A Female 31.5
Sample B Female 26.7
Sample C Male 13.7
Sample D Male 25.9
Entorhinal cortex
nTPM: 2.4
Samples: 4

Max nTPM: 2.9
Min nTPM: 1.8
Sample A Female 2.2
Sample B Female 2.9
Sample C Male 2.8
Sample D Male 1.8
Ventral hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 25.2
Min nTPM: 11.4
Sample A Female 18.5
Sample B Female 11.4
Sample C Male 17.4
Sample D Male 25.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 9.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.5
Samples: 4

Max nTPM: 4.2
Min nTPM: 1.4
Sample A Male 2.3
Sample B Male 2.1
Sample C Female 4.2
Sample D Female 1.4
Hippocampal formation
nTPM: 9.4
Samples: 4

Max nTPM: 12.1
Min nTPM: 5.6
Sample A Male 5.6
Sample B Male 12.1
Sample C Female 11.3
Sample D Female 8.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
74431065 Antisense, RP_060207_01_E06, Mouse strain C57BL/6J (56 days, male) 0.0

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