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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
77.0
nTPM
FANTOM5:
52.9
Scaled Tags Per Million
Pig:
48.5
nTPM
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
77.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 58.6
1984
Male, age 76, both hemispheres
121.8
2301
Female, age 85, both hemispheres
48.0
2090
Male, age 80, both hemispheres
32.5
2188
Female, age 91, both hemispheres
32.2
Dorsal cochlear nucleus nTPM: 50.3
2802
Male, age 74, right hemisphere
58.8
2058
Male, age 76, both hemispheres
56.0
2370
Male, age 61, both hemispheres
49.9
2378
Male, age 80, both hemispheres
46.0
2187
Female, age 91, both hemispheres
40.9
Dorsal tegmental nucleus nTPM: 43.5
2083
Male, age 80, both hemispheres
49.3
1936
Male, age 76, left hemisphere
47.3
2326
Male, age 74, both hemispheres
41.0
2358
Male, age 61, both hemispheres
36.4
Dorsolateral tegmental area nTPM: 36.7
2141
Male, age 76, both hemispheres
52.1
2654
Male, age 80, both hemispheres
45.3
2751
Female, age 85, both hemispheres
38.0
2360
Male, age 74, both hemispheres
32.9
2337
Male, age 61, both hemispheres
15.1
Kolliker-Fuse nucleus nTPM: 43.4
2163
Male, age 80, both hemispheres
51.3
2793
Female, age 91, left hemisphere
46.3
2315
Male, age 76, right hemisphere
32.6
Lateral lemniscal nuclei nTPM: 67.1
2169
Male, age 76, both hemispheres
85.6
2453
Male, age 74, right hemisphere
66.5
2036
Male, age 80, both hemispheres
64.5
2320
Female, age 91, left hemisphere
62.3
2746
Female, age 85, left hemisphere
56.5
Lateral parabrachial nucleus nTPM: 43.7
2139
Female, age 85, right hemisphere
69.0
2790
Male, age 61, both hemispheres
48.5
2013
Male, age 80, both hemispheres
39.2
2792
Male, age 76, both hemispheres
18.0
Lateral vestibular nucleus nTPM: 53.9
2184
Male, age 76, both hemispheres
65.2
2311
Male, age 80, both hemispheres
42.7
Locus coeruleus nTPM: 59.1
2123
Female, age 91, both hemispheres
73.9
2720
Male, age 74, both hemispheres
71.1
2162
Male, age 80, both hemispheres
62.8
2014
Male, age 55, unknown
60.8
2317
Female, age 72, unknown
57.4
1980
Male, age 76, both hemispheres
47.9
2788
Male, age 74, unknown
39.9
Medial parabrachial nucleus nTPM: 50.8
2463
Female, age 85, right hemisphere
71.4
2156
Male, age 61, both hemispheres
55.6
2854
Male, age 80, both hemispheres
45.6
2786
Male, age 76, both hemispheres
44.7
2170
Female, age 91, both hemispheres
36.8
Medial periolivary nuclei nTPM: 59.2
2063
Male, age 76, both hemispheres
83.9
2171
Female, age 85, both hemispheres
81.0
2458
Female, age 91, both hemispheres
51.1
2791
Male, age 74, right hemisphere
46.1
2081
Male, age 80, both hemispheres
33.7
Motor facial nucleus nTPM: 68.6
2062
Male, age 76, both hemispheres
95.0
2327
Male, age 80, both hemispheres
81.1
2795
Female, age 91, both hemispheres
74.9
2126
Male, age 61, both hemispheres
56.7
2697
Female, age 85, both hemispheres
55.7
2365
Male, age 74, right hemisphere
48.0
Motor trigeminal nucleus nTPM: 52.0
2560
Male, age 74, both hemispheres
59.7
2079
Male, age 80, both hemispheres
57.9
2321
Female, age 91, both hemispheres
49.8
2335
Male, age 61, both hemispheres
49.1
2309
Male, age 76, both hemispheres
43.8
Nuclei of the trapezoid body nTPM: 77.0
2735
Female, age 85, both hemispheres
93.0
2159
Male, age 61, both hemispheres
85.0
1983
Male, age 76, both hemispheres
76.6
2368
Female, age 91, both hemispheres
73.4
2166
Male, age 80, both hemispheres
57.1
Nucleus raphe magnus nTPM: 70.7
2172
Female, age 85, both hemispheres
92.5
2455
Male, age 74, both hemispheres
74.0
2160
Male, age 61, both hemispheres
70.5
2328
Male, age 80, both hemispheres
70.1
2459
Female, age 91, both hemispheres
61.0
2051
Male, age 76, both hemispheres
56.4
Paramedian reticular nucleus nTPM: 49.1
2313
Male, age 61, both hemispheres
62.4
2050
Female, age 85, both hemispheres
56.7
2057
Male, age 80, both hemispheres
52.0
2052
Male, age 76, both hemispheres
25.4
Pedunculopontine tegmental nucleus nTPM: 42.8
1921
Female, age 85, both hemispheres
56.7
2334
Male, age 80, both hemispheres
45.9
2338
Male, age 61, both hemispheres
25.9
Pontine nuclei nTPM: 62.8
2787
Female, age 85, both hemispheres
94.8
1863
Male, age 55, unknown
85.0
1968
Male, age 76, left hemisphere
76.3
2109
Female, age 72, unknown
66.3
2727
Male, age 61, right hemisphere
53.6
2454
Male, age 74, left hemisphere
47.3
2115
Male, age 80, left hemisphere
44.7
2319
Female, age 91, both hemispheres
34.7
Pontine raphe nucleus nTPM: 61.7
2122
Female, age 85, midline
70.4
2853
Male, age 76, midline
53.0
Posteroventral cochlear nucleus nTPM: 34.5
2752
Female, age 85, both hemispheres
61.3
2070
Male, age 76, both hemispheres
45.0
2371
Male, age 61, both hemispheres
38.7
2341
Male, age 80, both hemispheres
20.3
2135
Female, age 91, both hemispheres
7.4
Principal sensory trigeminal nucleus nTPM: 58.0
2158
Male, age 61, both hemispheres
72.0
2008
Male, age 80, left hemisphere
60.1
2324
Male, age 76, both hemispheres
58.6
2367
Female, age 91, left hemisphere
41.5
Reticular pontine nucleus, caudal nTPM: 59.1
2332
Male, age 80, right hemisphere
84.8
2092
Male, age 76, both hemispheres
57.7
2457
Female, age 91, both hemispheres
56.2
2559
Male, age 74, both hemispheres
37.5
Reticular pontine nucleus, oral nTPM: 48.2
2361
Male, age 74, both hemispheres
54.0
2012
Female, age 85, both hemispheres
53.5
2167
Male, age 76, both hemispheres
48.2
2366
Female, age 91, both hemispheres
43.2
1939
Male, age 80, both hemispheres
42.2
Reticulotegmental nucleus nTPM: 58.6
2325
Male, age 76, both hemispheres
64.2
2322
Female, age 91, both hemispheres
61.8
2452
Male, age 74, both hemispheres
54.5
2333
Male, age 80, both hemispheres
53.9
Spinal trigeminal nucleus, oral nTPM: 59.3
2737
Female, age 85, both hemispheres
70.1
2164
Male, age 80, both hemispheres
61.5
1978
Male, age 76, both hemispheres
46.4
Subcoeruleus area nTPM: 54.5
2089
Male, age 76, left hemisphere
72.1
2323
Female, age 91, left hemisphere
64.4
2451
Male, age 74, both hemispheres
56.8
1958
Male, age 80, both hemispheres
49.3
2369
Female, age 85, left hemisphere
30.1
Superior olive nTPM: 59.6
1875
Female, age 85, both hemispheres
71.2
2561
Female, age 91, both hemispheres
62.9
2329
Male, age 80, right hemisphere
61.7
2020
Male, age 76, both hemispheres
56.5
2364
Male, age 74, right hemisphere
46.0
Ventral periolivary nuclei nTPM: 66.9
2130
Female, age 85, both hemispheres
79.5
2165
Male, age 80, both hemispheres
69.3
2794
Female, age 91, left hemisphere
66.1
2023
Male, age 76, both hemispheres
52.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 54.0
2449
Male, age 74, both hemispheres
62.6
1959
Male, age 76, both hemispheres
62.0
2161
Male, age 80, both hemispheres
58.1
2456
Female, age 91, both hemispheres
56.1
2840
Female, age 85, both hemispheres
48.9
2359
Male, age 61, both hemispheres
36.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
