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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
30.8
nTPM
HPA Brain:
71.8
nTPM
GTEx:
30.8
nTPM
FANTOM5:
87.8
Scaled Tags Per Million
Pig:
61.0
nTPM
Mouse:
36.0
nTPM
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
71.8
Sample id
Sample description
nTPM
Amygdala nTPM: 67.9
2814
Male, age 76, right hemisphere
103.6
2695
Female, age 67, right hemisphere
62.4
1987
Female, age 91, left hemisphere
58.3
2514
Male, age 75, right hemisphere
58.0
2517
Female, age 94, left hemisphere
57.1
Basal amygdala nTPM: 70.3
2685
Female, age 94, left hemisphere
81.1
2827
Female, age 67, right hemisphere
80.0
1955
Male, age 76, both hemispheres
76.4
2243
Female, age 91, right hemisphere
73.3
2110
Male, age 80, left hemisphere
56.6
2609
Male, age 75, right hemisphere
54.2
Central amygdala nTPM: 71.8
1905
Male, age 76, both hemispheres
99.4
2826
Female, age 94, left hemisphere
82.6
2239
Male, age 80, left hemisphere
63.7
2515
Male, age 75, right hemisphere
60.2
2701
Female, age 91, right hemisphere
53.2
Corticomedial amygdala nTPM: 67.1
2535
Female, age 67, right hemisphere
79.6
2829
Male, age 80, left hemisphere
74.8
2242
Female, age 91, right hemisphere
65.6
2429
Female, age 94, left hemisphere
64.6
2240
Male, age 76, both hemispheres
61.5
2428
Male, age 75, right hemisphere
56.1
Lateral amygdala nTPM: 65.0
2534
Female, age 94, left hemisphere
94.8
1883
Male, age 76, both hemispheres
88.6
2256
Male, age 80, left hemisphere
60.1
2255
Female, age 91, right hemisphere
54.7
2830
Female, age 67, right hemisphere
53.4
2516
Male, age 75, right hemisphere
38.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
30.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 30.8
Samples: 152
Max nTPM: 119.7
Min nTPM: 2.7
Std nTPM: 18.7
Median nTPM: 25.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
119.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
79.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
76.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
73.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
71.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
67.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
65.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
64.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
62.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
61.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
61.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
55.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
55.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
55.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
54.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
54.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
53.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
53.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
53.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
53.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
51.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
50.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
50.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
49.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
47.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
47.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
47.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
46.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
46.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
45.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
45.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
45.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
45.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
44.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
44.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
43.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
43.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
43.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
42.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
42.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
42.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
42.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
41.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
41.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
40.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
40.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
40.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
39.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
39.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
39.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
38.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
38.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
37.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
37.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
37.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
36.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
36.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
35.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
35.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
33.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
33.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
32.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
31.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
31.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
30.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
30.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
30.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
30.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
30.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
29.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
28.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
28.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
27.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
26.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
26.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
25.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
25.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
25.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
25.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
25.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
25.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
24.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
24.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
24.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
23.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
23.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
23.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
22.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
22.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
22.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
22.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
22.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
22.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
21.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
21.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
20.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
20.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
20.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
20.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
19.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
19.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
19.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
19.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
18.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
18.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
18.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
18.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
18.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
17.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
17.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
16.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
16.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
16.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
16.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
15.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
15.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
15.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
15.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
15.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
14.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
14.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
14.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
14.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
14.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
13.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
12.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
12.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
12.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
11.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
11.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
11.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
11.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
11.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
11.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
11.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
10.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
10.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
10.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
10.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
10.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
10.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
10.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
9.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
9.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
7.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
6.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
6.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
5.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
5.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
4.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
3.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
2.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.