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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DALRD3 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
41.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
30.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
24.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
24.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
24.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
23.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
22.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
22.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
21.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
21.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
20.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
20.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
19.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
19.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
19.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
19.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
19.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
18.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
17.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
17.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
17.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
16.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
16.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
16.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
15.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
15.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
15.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
15.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
15.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
15.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
15.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
15.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
15.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
15.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
15.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
14.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
14.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
14.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
14.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
14.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
14.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
14.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
13.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
13.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
13.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
13.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
13.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
13.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
13.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
13.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
12.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
12.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
12.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
12.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
12.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
12.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
12.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
12.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
12.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
12.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
12.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
12.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
11.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
11.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
11.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
11.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
11.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
11.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
11.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
11.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
11.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
11.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
11.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
11.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
11.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
11.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
11.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
11.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
11.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
10.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
10.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
10.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
10.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
10.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
10.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
10.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
10.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
10.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
10.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
10.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
10.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
10.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
10.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
10.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
10.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
10.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
10.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
10.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
10.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
10.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
10.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
9.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
9.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
9.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
9.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
9.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
9.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
9.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
9.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
9.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
9.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
9.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
9.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
9.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
9.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
9.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
9.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
9.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
9.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
9.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
9.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
9.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
9.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
9.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
9.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
8.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
8.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
8.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
8.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
8.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
8.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
8.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
8.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
8.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
8.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
8.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
8.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
8.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
8.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
8.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
8.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
8.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
8.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
8.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
8.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
8.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
8.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
8.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
8.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
8.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
8.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
8.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
8.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
8.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
8.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
8.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
8.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
8.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
8.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
7.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
7.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
7.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
7.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
7.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
7.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
7.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
7.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
7.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
7.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
7.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
7.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
7.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
7.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
7.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
7.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
7.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
7.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
7.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
7.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
7.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
7.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
7.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
7.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
7.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
7.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
7.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
7.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
7.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
7.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
7.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
7.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
7.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
7.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
6.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
6.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
6.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
6.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
6.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
6.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
6.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
6.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
6.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
6.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
6.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
6.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
6.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
6.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
6.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
6.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
6.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
6.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
6.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
6.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
6.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
6.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
6.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
6.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
6.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
6.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
6.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
6.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
6.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
6.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
6.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
5.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
5.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
5.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
5.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
5.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
5.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
5.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
5.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
5.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
5.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
5.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
5.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
5.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
5.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
5.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
5.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
5.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
5.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
5.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
5.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
5.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
5.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
4.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
4.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
4.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
4.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
4.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
4.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
4.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
4.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
4.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
4.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
4.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
4.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
4.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
4.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
4.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
4.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
4.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
4.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
4.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
4.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
4.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
4.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
3.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
3.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
3.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
3.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
3.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
3.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
3.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
3.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
3.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
3.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
3.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
3.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
3.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
3.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
3.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
3.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
2.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
2.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DALRD3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.9
Number of samples
231
Samples
Sample
Description
TPM
DO45149
0 years, female, NA, stage:2, alive, 1260 days
197.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
169.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
149.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
145.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
125.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
101.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
101.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
93.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
91.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
83.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
81.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
76.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
71.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
69.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
64.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
63.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
63.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
56.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
56.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
54.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
54.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
53.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
52.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
51.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
50.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
50.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
48.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
48.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
47.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
47.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
47.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
47.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
45.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
44.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
44.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
44.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
44.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
43.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
43.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
42.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
42.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
42.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
41.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
40.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
40.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
40.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
40.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
39.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
39.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
39.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
39.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
38.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
38.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
38.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
37.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
37.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
36.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
36.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
36.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
35.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
35.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
35.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
35.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
34.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
34.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
34.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
33.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
33.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
33.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
33.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
33.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
33.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
33.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
32.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
32.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
32.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
32.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
32.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
31.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
31.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
31.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
31.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
30.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
30.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
30.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
30.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
29.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
29.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
29.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
29.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
29.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
28.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
28.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
28.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
28.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
28.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
27.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
27.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
27.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
27.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
26.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
26.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
26.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
26.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
25.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
25.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
25.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
25.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
25.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
25.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
25.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
25.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
25.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
25.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
25.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
24.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
24.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
24.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
24.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
24.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
24.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
24.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
24.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
23.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
23.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
23.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
23.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
23.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
23.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
23.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
23.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
23.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
23.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
22.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
22.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
22.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
22.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
22.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
22.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
22.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
22.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
22.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
22.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
21.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
21.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
21.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
21.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
21.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
21.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
21.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
20.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
20.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
20.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
20.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
20.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
20.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
20.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
20.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
19.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
19.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
19.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
19.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
19.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
19.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
19.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
19.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
19.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
19.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
18.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
18.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
18.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
18.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
18.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
18.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
18.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
17.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
17.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
17.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
17.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
17.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
17.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
17.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
16.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
16.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
16.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
16.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
16.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
16.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
16.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
16.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
16.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
16.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
15.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
15.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
15.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
15.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
15.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
15.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
15.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
15.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
15.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
15.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
14.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
14.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
14.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
14.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
14.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
13.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
13.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
13.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
13.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
13.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
13.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
13.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
13.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
12.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
12.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
12.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
12.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
12.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
11.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
11.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
11.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
11.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
10.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
10.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
10.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
10.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
10.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
9.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
714
Normal
1.5
1016
Normal
1.4
911
Tumor
1.3
862
Normal
1.3
1014
Normal
1.3
982
Normal
1.3
716
Normal
1.3
616
Normal
1.2
722
Normal
1.1
696
Normal
1.1
695
Tumor
1.1
978
Normal
1.0
342
Normal
1.0
466
Normal
1.0
864
Normal
1.0
984
Normal
0.9
866
Normal
0.9
868
Normal
0.9
286
Normal
0.8
981
Tumor
0.8
877
Tumor
0.8
128
Normal
0.8
518
Normal
0.8
228
Normal
0.7
686
Normal
0.7
944
Normal
0.7
952
Normal
0.7
114
Normal
0.7
425
Tumor
0.7
428
Normal
0.7
756
Normal
0.7
172
Normal
0.7
516
Normal
0.7
162
Normal
0.7
514
Normal
0.7
212
Normal
0.7
786
Normal
0.7
938
Normal
0.6
778
Normal
0.6
284
Normal
0.6
464
Normal
0.6
427
Tumor
0.6
358
Normal
0.6
468
Normal
0.6
186
Normal
0.6
111
Normal
0.6
954
Normal
0.5
148
Normal
0.5
526
Normal
0.5
573
Tumor
0.5
564
Normal
0.5
224
Normal
0.5
574
Normal
0.5
648
Normal
0.5
456
Normal
0.5
913
Tumor
0.5
615
Tumor
0.4
572
Normal
0.4
956
Normal
0.4
515
Tumor
0.4
126
Normal
0.4
955
Tumor
0.4
874
Normal
0.4
462
Normal
0.4
474
Normal
0.4
411
Tumor
0.4
533
Tumor
0.4
818
Normal
0.4
422
Normal
0.4
127
Tumor
0.4
482
Normal
0.4
958
Normal
0.4
472
Normal
0.4
777
Tumor
0.4
666
Normal
0.4
976
Normal
0.3
465
Tumor
0.3
394
Normal
0.3
352
Normal
0.3
452
Normal
0.3
964
Normal
0.3
724
Normal
0.3
424
Normal
0.3
884
Normal
0.3
816
Normal
0.3
125
Tumor
0.3
1032
Normal
0.3
746
Normal
0.3
568
Normal
0.3
713
Tumor
0.3
664
Normal
0.3
635
Tumor
0.3
423
Tumor
0.3
925
Tumor
0.3
421
Tumor
0.3
883
Tumor
0.3
865
Tumor
0.3
741
Tumor
0.3
258
Normal
0.2
814
Normal
0.2
858
Normal
0.2
494
Normal
0.2
824
Normal
0.2
926
Normal
0.2
414
Normal
0.2
738
Normal
0.2
1026
Normal
0.2
642
Normal
0.2
113
Tumor
0.2
384
Normal
0.2
362
Normal
0.2
227
Tumor
0.2
412
Normal
0.2
1022
Normal
0.2
388
Normal
0.2
1013
Tumor
0.2
966
Normal
0.2
488
Normal
0.2
727
Tumor
0.2
498
Normal
0.2
416
Normal
0.2
882
Normal
0.2
745
Tumor
0.2
392
Normal
0.2
112
Tumor
0.2
563
Tumor
0.2
124
Normal
0.1
867
Tumor
0.1
742
Normal
0.1
426
Normal
0.1
376
Normal
0.1
364
Normal
0.1
354
Normal
0.1
188
Normal
0.1
368
Normal
0.1
873
Tumor
0.1
852
Normal
0.1
916
Normal
0.1
968
Normal
0.1
878
Normal
0.1
513
Tumor
0.1
662
Normal
0.1
881
Tumor
0.1
721
Tumor
0.1
413
Tumor
0.1
366
Normal
0.1
1015
Tumor
0.1
396
Normal
0.1
527
Tumor
0.1
924
Normal
0.1
817
Tumor
0.1
912
Normal
0.1
344
Normal
0.1
328
Normal
0.1
185
Tumor
0.1
785
Tumor
0.0
744
Normal
0.0
356
Normal
0.0
484
Normal
0.0
386
Normal
0.0
663
Tumor
0.0
1042
Normal
0.0
915
Tumor
0.0
815
Tumor
0.0
951
Tumor
0.0
672
Normal
0.0
558
Normal
0.0
353
Tumor
0.0
361
Tumor
0.0
123
Tumor
0.0
914
Normal
0.0
723
Tumor
0.0
554
Normal
0.0
262
Normal
0.0
628
Normal
0.0
627
Tumor
0.0
363
Tumor
0.0
857
Tumor
-0.1
327
Tumor
-0.1
755
Tumor
-0.1
918
Normal
-0.1
823
Tumor
-0.1
571
Tumor
-0.1
232
Normal
-0.1
1041
Tumor
-0.1
618
Normal
-0.1
743
Tumor
-0.1
537
Tumor
-0.1
636
Normal
-0.1
546
Normal
-0.2
647
Tumor
-0.2
813
Tumor
-0.2
524
Normal
-0.2
737
Tumor
-0.2
957
Tumor
-0.2
553
Tumor
-0.2
665
Tumor
-0.2
937
Tumor
-0.2
187
Tumor
-0.2
1028
Normal
-0.2
481
Tumor
-0.2
728
Normal
-0.2
557
Tumor
-0.2
922
Normal
-0.2
534
Normal
-0.2
161
Tumor
-0.2
567
Tumor
-0.3
267
Tumor
-0.3
272
Normal
-0.3
851
Tumor
-0.3
525
Tumor
-0.3
415
Tumor
-0.3
365
Tumor
-0.3
223
Tumor
-0.3
917
Tumor
-0.3
545
Tumor
-0.3
617
Tumor
-0.3
953
Tumor
-0.3
268
Normal
-0.3
863
Tumor
-0.3
861
Tumor
-0.4
923
Tumor
-0.4
661
Tumor
-0.4
538
Normal
-0.4
147
Tumor
-0.4
487
Tumor
-0.4
171
Tumor
-0.4
375
Tumor
-0.4
231
Tumor
-0.4
355
Tumor
-0.4
383
Tumor
-0.4
461
Tumor
-0.4
492
Normal
-0.4
641
Tumor
-0.4
528
Normal
-0.4
921
Tumor
-0.4
523
Tumor
-0.4
367
Tumor
-0.4
261
Tumor
-0.5
478
Normal
-0.5
491
Tumor
-0.5
1031
Tumor
-0.5
285
Tumor
-0.5
975
Tumor
-0.5
671
Tumor
-0.5
483
Tumor
-0.5
271
Tumor
-0.5
493
Tumor
-0.5
983
Tumor
-0.6
257
Tumor
-0.6
685
Tumor
-0.6
517
Tumor
-0.6
977
Tumor
-0.6
393
Tumor
-0.6
943
Tumor
-0.7
341
Tumor
-0.7
387
Tumor
-0.7
963
Tumor
-0.7
497
Tumor
-0.7
715
Tumor
-0.7
211
Tumor
-0.7
395
Tumor
-0.8
477
Tumor
-0.8
471
Tumor
-0.8
965
Tumor
-0.9
283
Tumor
-0.9
385
Tumor
-0.9
967
Tumor
-0.9
455
Tumor
-0.9
391
Tumor
-0.9
1025
Tumor
-1.0
1021
Tumor
-1.0
1027
Tumor
-1.0
467
Tumor
-1.1
473
Tumor
-1.2
357
Tumor
-1.2
463
Tumor
-1.3
343
Tumor
-1.5
451
Tumor
-1.5
351
Tumor
-1.8
131
Tumor
N/A
132
Normal
N/A
135
Tumor
N/A
136
Normal
N/A
137
Tumor
N/A
138
Normal
N/A
141
Tumor
N/A
142
Normal
N/A
145
Tumor
N/A
146
Normal
N/A
277
Tumor
N/A
278
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
297
Tumor
N/A
298
Normal
N/A
1046
Normal
N/A
1045
Tumor
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
535
Tumor
N/A
536
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
312
Normal
N/A
433
Tumor
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
443
Tumor
N/A
444
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
447
Tumor
N/A
448
Normal
N/A
331
Tumor
N/A
332
Normal
N/A
213
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
221
Tumor
N/A
222
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
