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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:33.3 nTPM
HPA Brain:24.2 nTPM
GTEx:33.3 nTPM
FANTOM5:24.7 Scaled Tags Per Million
Pig:15.9 nTPM
Mouse:21.6 nTPM
Allen mouse:8.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA069527Antibody CAB033018
Glial cells HighNot detected
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 23.0
2288 Male, age 75, left hemisphere 24.3
2481 Female, age 94, left hemisphere 24.3
2290 Female, age 72, unknown 24.2
2846 Female, age 79, unknown 23.4
1781 Male, age 74, unknown 23.0
1857 Female, age 85, left hemisphere 22.7
1854 Male, age 80, left hemisphere 21.6
2289 Male, age 61, right hemisphere 20.5
Globus pallidus, externus
nTPM: 22.1
2646 Male, age 61, right hemisphere 25.5
2395 Male, age 75, both hemispheres 25.0
2772 Female, age 79, unknown 23.7
1996 Male, age 80, right hemisphere 19.6
2567 Female, age 72, unknown 16.7
Globus pallidus, internus
nTPM: 22.2
2287 Male, age 75, right hemisphere 28.3
2483 Female, age 94, right hemisphere 24.7
1818 Male, age 74, unknown 22.9
2778 Female, age 91, both hemispheres 21.8
2111 Female, age 85, right hemisphere 20.6
2566 Female, age 72, unknown 20.0
2037 Male, age 80, right hemisphere 17.6
Nucleus accumbens
nTPM: 23.2
1856 Female, age 91, right hemisphere 26.8
1783 Male, age 74, unknown 25.7
2286 Male, age 75, left hemisphere 24.6
2391 Female, age 94, left hemisphere 23.9
2698 Female, age 72, unknown 21.9
1806 Female, age 85, left hemisphere 21.3
2732 Male, age 80, right hemisphere 21.1
2824 Male, age 61, right hemisphere 20.3
Nucleus basalis of Meynert
nTPM: 21.1
2569 Male, age 61, both hemispheres 25.2
2484 Female, age 94, left hemisphere 21.2
2821 Male, age 75, both hemispheres 20.6
2393 Male, age 80, right hemisphere 17.6
Nucleus of the diagonal band
nTPM: 24.2
2775 Male, age 80, right hemisphere 28.6
1812 Female, age 91, both hemispheres 26.8
2029 Male, age 61, right hemisphere 23.4
2195 Female, age 85, both hemispheres 21.8
1979 Male, age 74, unknown 20.4
Putamen
nTPM: 22.6
2466 Female, age 79, unknown 24.9
1838 Male, age 80, right hemisphere 24.4
2482 Female, age 94, left hemisphere 23.1
2647 Male, age 75, left hemisphere 22.7
1937 Female, age 91, right hemisphere 21.8
1829 Male, age 74, unknown 21.4
2489 Female, age 72, unknown 19.5
Septal nuclei
nTPM: 22.5
1960 Male, age 74, unknown 28.3
2031 Female, age 72, unknown 25.4
2059 Female, age 85, both hemispheres 23.2
2009 Female, age 91, both hemispheres 22.9
2629 Female, age 94, right hemisphere 22.9
2394 Male, age 61, left hemisphere 17.4
2199 Male, age 80, right hemisphere 17.0
Stria terminalis, bed nucleus
nTPM: 23.5
1974 Female, age 91, both hemispheres 27.3
2486 Female, age 94, both hemispheres 23.1
2201 Male, age 74, unknown 20.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 31.7
Samples: 246

Max nTPM: 64.5
Min nTPM: 19.2
Std nTPM: 5.7
Median nTPM: 31.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 64.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 51.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 46.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 46.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 43.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 43.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 42.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 42.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 42.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 42.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 42.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 42.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 42.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 41.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 41.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 41.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 41.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 41.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 40.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 40.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 40.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 39.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 39.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 39.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 39.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 39.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 39.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 39.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 38.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 38.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 38.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 38.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 38.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 38.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 37.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 37.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 37.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 37.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 37.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 37.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 37.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 37.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 37.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 37.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 37.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 36.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 36.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 36.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 36.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 36.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 36.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 36.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 36.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 36.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 35.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 35.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 35.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 35.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 35.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 35.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 34.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 34.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 34.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 34.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 34.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 34.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 34.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 34.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 34.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 34.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 34.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 34.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 33.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 33.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 33.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 33.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 33.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 33.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 33.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 33.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 33.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 33.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 33.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 33.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 33.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 33.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 32.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 32.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 32.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 32.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 32.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 32.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 32.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 32.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 32.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 32.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 32.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 32.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 32.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 32.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 31.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 31.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 31.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 31.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 31.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 31.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 31.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 31.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 31.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 31.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 31.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 31.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 31.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 31.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 31.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 31.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 31.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 31.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 31.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 31.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 31.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 31.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 31.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 31.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 31.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 31.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 30.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 30.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 30.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 30.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 30.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 30.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 30.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 30.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 30.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 30.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 30.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 30.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 30.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 30.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 30.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 30.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 30.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 30.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 29.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 29.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 29.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 29.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 29.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 29.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 29.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 29.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 29.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 29.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 29.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 29.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 29.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 29.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 29.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 29.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 29.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 29.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 29.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 28.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 28.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 28.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 28.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 28.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 28.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 28.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 28.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 28.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 28.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 28.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 28.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 28.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 28.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 28.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 28.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 28.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 28.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 28.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 28.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 28.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 28.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 27.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 27.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 27.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 27.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 27.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 27.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 27.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 27.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 27.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 27.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 27.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 27.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 27.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 27.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 26.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 26.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 26.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 26.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 26.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 26.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 26.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 26.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 26.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 26.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 26.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 26.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 26.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 26.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 26.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 25.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 25.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 25.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 25.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 25.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 25.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 25.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 25.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 24.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 24.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 24.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 24.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 24.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 24.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 24.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 24.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 23.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 23.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 23.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 23.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 23.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 23.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 22.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 22.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 22.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 22.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 21.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 21.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 20.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 20.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 20.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 19.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 32.0
Samples: 246

Max nTPM: 54.3
Min nTPM: 19.0
Std nTPM: 6.4
Median nTPM: 30.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 54.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 52.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 52.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 49.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 49.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 47.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 47.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 46.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 46.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 46.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 46.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 45.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 45.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 44.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 43.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 43.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 42.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 42.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 41.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 41.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 41.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 41.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 41.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 41.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 40.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 40.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 40.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 40.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 40.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 40.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 39.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 39.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 39.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 39.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 39.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 38.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 38.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 38.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 38.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 38.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 38.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 38.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 38.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 38.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 38.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 37.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 37.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 37.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 37.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 37.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 36.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 36.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 36.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 36.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 35.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 35.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 35.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 35.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 35.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 35.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 35.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 35.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 35.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 35.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 35.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 34.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 34.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 34.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 34.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 34.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 33.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 33.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 33.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 33.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 33.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 33.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 33.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 33.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 33.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 33.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 33.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 33.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 33.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 33.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 33.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 33.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 32.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 32.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 32.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 32.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 32.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 32.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 32.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 32.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 32.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 32.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 32.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 32.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 32.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 32.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 32.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 32.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 32.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 31.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 31.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 31.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 31.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 31.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 31.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 31.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 31.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 31.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 31.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 31.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 31.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 31.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 31.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 30.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 30.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 30.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 30.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 30.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 30.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 30.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 30.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 30.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 30.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 30.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 30.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 30.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 30.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 30.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 30.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 30.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 30.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 30.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 30.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 30.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 29.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 29.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 29.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 29.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 29.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 29.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 29.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 29.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 29.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 29.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 29.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 29.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 29.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 29.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 29.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 29.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 29.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 29.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 29.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 29.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 29.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 29.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 29.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 29.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 29.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 28.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 28.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 28.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 28.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 28.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 28.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 28.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 28.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 28.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 28.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 28.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 28.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 28.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 28.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 27.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 27.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 27.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 27.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 27.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 27.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 27.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 27.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 27.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 27.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 27.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 27.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 27.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 27.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 27.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 27.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 27.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 27.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 27.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 27.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 26.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 26.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 26.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 26.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 26.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 26.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 26.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 26.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 26.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 26.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 26.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 26.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 25.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 25.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 25.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 25.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 25.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 25.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 25.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 25.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 25.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 25.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 25.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 25.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 24.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 24.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 24.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 24.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 24.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 24.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 24.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 24.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 24.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 23.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 23.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 23.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 23.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 23.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 23.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 22.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 22.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 22.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 22.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 21.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 21.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 21.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 21.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 19.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 19.0
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Brain - Putamen (basal ganglia)
Average nTPM: 33.3
Samples: 205

Max nTPM: 53.2
Min nTPM: 21.8
Std nTPM: 6.2
Median nTPM: 32.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 53.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 52.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 50.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 49.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 46.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 45.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 44.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 44.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 44.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 43.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 43.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 43.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 43.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 43.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 42.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 42.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 42.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 42.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 41.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 41.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 41.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 41.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 41.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 41.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 41.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 40.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 40.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 40.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 40.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 40.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 40.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 40.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 40.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 40.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 39.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 39.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 39.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 39.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 39.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 39.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 39.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 38.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 38.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 38.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 38.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 38.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 38.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 38.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 38.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 38.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 38.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 38.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 37.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 37.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 37.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 37.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 37.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 36.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 36.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 36.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 36.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 36.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 36.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 36.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 36.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 36.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 35.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 35.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 35.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 35.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 35.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 35.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 35.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 35.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 34.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 34.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 34.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 34.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 34.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 34.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 34.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 34.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 33.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 33.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 33.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 33.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 33.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 33.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 33.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 33.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 33.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 33.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 33.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 33.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 32.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 32.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 32.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 32.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 32.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 32.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 32.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 32.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 32.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 32.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 32.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 32.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 32.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 32.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 32.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 31.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 31.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 31.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 31.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 31.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 31.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 31.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 31.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 31.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 31.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 31.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 30.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 30.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 30.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 30.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 30.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 30.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 30.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 30.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 30.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 30.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 30.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 30.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 30.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 30.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 30.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 30.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 30.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 30.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 30.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 29.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 29.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 29.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 29.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 29.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 29.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 29.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 29.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 29.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 29.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 29.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 28.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 28.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 28.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 28.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 28.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 28.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 28.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 28.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 28.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 28.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 28.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 28.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 28.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 27.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 27.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 27.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 27.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 27.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 27.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 27.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 27.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 27.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 27.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 26.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 26.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 26.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 26.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 26.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 26.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 26.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 25.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 25.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 25.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 25.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 25.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 25.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 25.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 25.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 24.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 24.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 24.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 24.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 24.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 24.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 24.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 24.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 24.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 23.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 23.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 23.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 23.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 23.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 23.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 22.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 21.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

24.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 23.3
FF:10164-103B2 76 years, female 23.3
Nucleus accumbens
Scaled Tags Per Million: 24.7
FF:10037-101F1 23-56 years, mixed 24.7
Putamen
Scaled Tags Per Million: 21.1
FF:10176-103C5 60 years, female 21.1
Globus pallidus
Scaled Tags Per Million: 20.5
FF:10161-103A8 76 years, female 23.8
FF:10175-103C4 60 years, female 17.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.9
Pig sample Sample description nTPM
Caudate
nTPM: 15.0
Samples: 4

Max nTPM: 17.6
Min nTPM: 12.8
Sample A Female 12.8
Sample B Female 15.5
Sample C Male 17.6
Sample D Male 14.0
Putamen
nTPM: 15.9
Samples: 4

Max nTPM: 17.7
Min nTPM: 13.8
Sample A Female 16.0
Sample B Female 13.8
Sample C Male 17.7
Sample D Male 16.0
Septum
nTPM: 13.9
Samples: 4

Max nTPM: 16.0
Min nTPM: 10.6
Sample A Female 16.0
Sample B Female 14.2
Sample C Male 14.7
Sample D Male 10.6
Ventral pallidum
nTPM: 15.0
Samples: 4

Max nTPM: 16.3
Min nTPM: 13.3
Sample A Female 13.3
Sample B Female 16.3
Sample C Male 16.3
Sample D Male 14.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 20.0
Samples: 4

Max nTPM: 21.1
Min nTPM: 18.3
Sample A Male 21.1
Sample B Male 20.4
Sample C Female 20.1
Sample D Female 18.3
Septum
nTPM: 20.0
Samples: 4

Max nTPM: 24.9
Min nTPM: 17.0
Sample A Male 24.9
Sample B Male 17.7
Sample C Female 20.2
Sample D Female 17.0
Ventral forebrain
nTPM: 21.6
Samples: 4

Max nTPM: 24.0
Min nTPM: 19.4
Sample A Male 21.3
Sample B Male 19.4
Sample C Female 21.6
Sample D Female 24.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.1
68745426 Antisense, RP_050210_01_H09, Mouse strain C57BL/6J (56 days, male) 8.1
Pallidum
Expression energy: 8.0
68745426 Antisense, RP_050210_01_H09, Mouse strain C57BL/6J (56 days, male) 8.0

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