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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DMAP1 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
52.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
50.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
48.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
46.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
44.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
42.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
42.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
40.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
37.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
36.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
35.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
35.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
34.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
34.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
33.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
33.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
33.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
32.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
32.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
32.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
32.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
32.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
31.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
31.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
31.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
31.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
30.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
30.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
30.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
30.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
29.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
29.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
29.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
29.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
29.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
29.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
28.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
28.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
28.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
28.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
28.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
27.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
27.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
27.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
27.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
27.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
27.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
27.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
27.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
27.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
26.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
26.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
26.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
26.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
25.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
25.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
25.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
25.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
25.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
25.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
25.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
25.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
25.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
25.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
25.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
25.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
25.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
24.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
24.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
24.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
24.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
23.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
23.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
23.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
23.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
23.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
23.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
23.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
23.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
23.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
23.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
23.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
22.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
22.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
22.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
22.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
22.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
22.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
22.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
22.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
22.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
22.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
22.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
22.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
22.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
22.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
22.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
22.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
21.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
21.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
21.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
21.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
21.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
21.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
21.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
21.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
21.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
21.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
21.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
21.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
21.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
21.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
21.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
20.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
20.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
20.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
20.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
20.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
20.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
20.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
20.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
20.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
20.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
20.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
20.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
20.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
20.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
19.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
19.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
19.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
19.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
19.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
19.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
19.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
19.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
19.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
19.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
19.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
19.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
19.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
19.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
19.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
19.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
19.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
19.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
19.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
19.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
18.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
18.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
18.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
18.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
18.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
18.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
18.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
18.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
18.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
18.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
18.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
18.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
18.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
18.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
18.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
18.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
18.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
18.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
18.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
18.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
17.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
17.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
17.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
17.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
17.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
17.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
17.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
17.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
17.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
17.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
17.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
17.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
17.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
17.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
17.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
17.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
17.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
17.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
17.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
17.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
17.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
17.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
17.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
17.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
17.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
17.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
17.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
17.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
17.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
17.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
17.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
16.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
16.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
16.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
16.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
16.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
16.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
16.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
16.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
16.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
16.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
16.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
16.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
16.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
16.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
16.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
16.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
16.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
16.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
16.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
16.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
16.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
16.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
16.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
15.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
15.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
15.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
15.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
15.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
15.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
15.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
15.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
15.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
15.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
15.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
15.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
15.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
15.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
15.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
15.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
15.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
15.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
15.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
15.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
15.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
15.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
15.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
15.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
15.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
15.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
15.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
15.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
15.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
15.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
15.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
14.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
14.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
14.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
14.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
14.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
14.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
14.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
14.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
14.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
14.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
14.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
14.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
14.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
14.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
14.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
14.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
14.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
14.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
14.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
14.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
14.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
14.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
14.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
14.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
14.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
13.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
13.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
13.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
13.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
13.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
13.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
13.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
13.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
13.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
13.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
13.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
13.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
13.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
13.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
13.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
13.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
13.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
13.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
13.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
13.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
13.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
13.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
13.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
12.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
12.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
12.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
12.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
12.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
12.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
12.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
12.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
12.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
12.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
12.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
12.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
12.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
12.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
12.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
12.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
12.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
11.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
11.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
11.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
11.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
11.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
11.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
11.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
11.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
11.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
11.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
11.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
11.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
11.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
11.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
10.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
10.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
10.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
10.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
10.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
10.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
10.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
10.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
10.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
9.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
9.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
9.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
9.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
9.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
9.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
9.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
9.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
9.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
9.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
9.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
9.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
8.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
8.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
8.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
8.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
7.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
7.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DMAP1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.0
Number of samples
231
Samples
Sample
Description
TPM
DO45149
0 years, female, NA, stage:2, alive, 1260 days
122.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
93.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
79.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
62.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
58.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
58.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
55.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
51.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
49.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
44.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
39.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
37.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
37.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
36.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
35.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
34.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
32.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
32.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
32.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
32.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
31.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
31.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
30.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
29.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
29.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
29.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
28.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
28.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
28.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
28.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
28.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
27.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
27.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
27.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
27.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
27.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
26.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
26.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
25.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
25.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
25.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
25.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
25.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
25.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
24.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
24.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
24.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
24.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
24.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
24.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
24.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
24.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
24.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
23.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
23.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
23.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
23.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
23.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
23.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
23.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
23.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
22.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
22.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
22.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
22.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
22.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
21.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
21.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
21.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
21.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
21.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
21.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
21.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
21.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
21.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
21.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
20.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
20.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
20.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
20.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
20.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
20.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
20.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
20.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
20.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
20.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
19.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
19.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
19.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
19.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
19.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
19.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
19.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
19.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
18.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
18.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
18.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
18.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
18.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
18.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
18.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
18.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
18.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
18.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
18.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
18.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
18.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
18.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
18.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
18.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
18.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
18.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
17.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
17.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
17.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
17.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
17.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
17.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
16.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
16.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
16.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
16.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
16.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
16.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
16.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
16.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
16.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
16.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
16.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
16.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
16.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
15.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
15.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
15.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
15.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
15.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
15.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
15.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
15.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
15.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
15.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
14.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
14.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
14.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
14.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
14.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
14.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
14.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
14.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
14.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
14.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
14.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
14.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
14.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
14.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
14.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
14.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
14.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
13.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
13.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
13.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
13.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
13.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
13.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
13.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
13.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
13.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
13.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
13.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
13.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
13.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
13.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
13.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
13.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
12.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
12.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
12.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
12.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
12.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
12.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
12.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
12.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
12.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
11.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
11.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
11.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
11.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
11.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
11.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
11.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
11.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
11.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
11.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
11.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
11.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
11.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
11.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
11.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
11.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
10.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
10.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
10.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
10.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
10.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
10.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
10.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
10.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
10.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
10.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
10.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
9.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
9.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
9.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
9.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
9.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
8.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
8.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
8.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
8.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
8.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
7.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
7.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
7.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
7.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
7.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
6.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
5.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
497
Tumor
1.1
957
Tumor
1.0
965
Tumor
0.9
425
Tumor
0.9
967
Tumor
0.8
523
Tumor
0.7
355
Tumor
0.7
737
Tumor
0.7
865
Tumor
0.7
943
Tumor
0.6
1013
Tumor
0.6
743
Tumor
0.6
411
Tumor
0.6
545
Tumor
0.6
647
Tumor
0.6
695
Tumor
0.6
487
Tumor
0.6
977
Tumor
0.5
131
Tumor
0.5
473
Tumor
0.5
877
Tumor
0.5
533
Tumor
0.5
413
Tumor
0.5
923
Tumor
0.5
1042
Normal
0.5
727
Tumor
0.5
983
Tumor
0.5
951
Tumor
0.5
351
Tumor
0.5
535
Tumor
0.4
277
Tumor
0.4
663
Tumor
0.4
123
Tumor
0.4
685
Tumor
0.4
975
Tumor
0.4
357
Tumor
0.4
1044
Normal
0.4
937
Tumor
0.4
1021
Tumor
0.4
387
Tumor
0.4
641
Tumor
0.4
1045
Tumor
0.4
313
Tumor
0.4
698
Normal
0.4
813
Tumor
0.4
537
Tumor
0.3
661
Tumor
0.3
1046
Normal
0.3
571
Tumor
0.3
921
Tumor
0.3
112
Tumor
0.3
431
Tumor
0.3
814
Normal
0.3
917
Tumor
0.3
635
Tumor
0.3
1025
Tumor
0.3
385
Tumor
0.3
963
Tumor
0.3
517
Tumor
0.3
463
Tumor
0.3
671
Tumor
0.3
343
Tumor
0.3
161
Tumor
0.3
331
Tumor
0.3
393
Tumor
0.3
211
Tumor
0.3
267
Tumor
0.2
1031
Tumor
0.2
493
Tumor
0.2
285
Tumor
0.2
113
Tumor
0.2
953
Tumor
0.2
1032
Normal
0.2
525
Tumor
0.2
715
Tumor
0.2
427
Tumor
0.2
477
Tumor
0.2
925
Tumor
0.2
467
Tumor
0.2
227
Tumor
0.2
448
Normal
0.2
478
Normal
0.2
455
Tumor
0.2
135
Tumor
0.2
283
Tumor
0.2
863
Tumor
0.2
145
Tumor
0.2
777
Tumor
0.2
367
Tumor
0.2
785
Tumor
0.2
191
Tumor
0.2
271
Tumor
0.2
527
Tumor
0.2
447
Tumor
0.2
261
Tumor
0.2
481
Tumor
0.2
297
Tumor
0.2
873
Tumor
0.2
221
Tumor
0.1
672
Normal
0.1
443
Tumor
0.1
341
Tumor
0.1
342
Normal
0.1
268
Normal
0.1
724
Normal
0.1
415
Tumor
0.1
232
Normal
0.1
328
Normal
0.1
1041
Tumor
0.1
231
Tumor
0.1
483
Tumor
0.1
563
Tumor
0.1
954
Normal
0.1
664
Normal
0.1
213
Tumor
0.1
491
Tumor
0.1
223
Tumor
0.1
938
Normal
0.1
228
Normal
0.1
286
Normal
0.1
553
Tumor
0.1
412
Normal
0.1
272
Normal
0.1
125
Tumor
0.1
883
Tumor
0.1
354
Normal
0.1
666
Normal
0.1
111
Normal
0.1
515
Tumor
0.1
978
Normal
0.1
665
Tumor
0.1
391
Tumor
0.1
536
Normal
0.1
352
Normal
0.1
573
Tumor
0.1
1014
Normal
0.1
721
Tumor
0.1
127
Tumor
0.1
384
Normal
0.1
741
Tumor
0.1
141
Tumor
0.1
524
Normal
0.1
924
Normal
0.1
471
Tumor
0.1
861
Tumor
0.1
1028
Normal
0.1
224
Normal
0.1
958
Normal
0.1
128
Normal
0.1
955
Tumor
0.1
124
Normal
0.1
185
Tumor
0.1
513
Tumor
0.1
171
Tumor
0.1
1022
Normal
0.1
311
Tumor
0.1
823
Tumor
0.1
648
Normal
0.1
755
Tumor
0.1
284
Normal
0.1
146
Normal
0.1
217
Tumor
0.1
126
Normal
0.1
817
Tumor
0.1
433
Tumor
0.1
383
Tumor
0.1
364
Normal
0.0
212
Normal
0.0
435
Tumor
0.0
662
Normal
0.0
862
Normal
0.0
984
Normal
0.0
557
Tumor
0.0
465
Tumor
0.0
857
Tumor
0.0
423
Tumor
0.0
258
Normal
0.0
786
Normal
0.0
616
Normal
0.0
361
Tumor
0.0
538
Normal
0.0
482
Normal
0.0
554
Normal
0.0
884
Normal
0.0
744
Normal
0.0
192
Normal
0.0
262
Normal
0.0
778
Normal
0.0
966
Normal
0.0
824
Normal
0.0
421
Tumor
0.0
516
Normal
0.0
815
Tumor
0.0
114
Normal
0.0
913
Tumor
0.0
356
Normal
0.0
756
Normal
0.0
926
Normal
0.0
472
Normal
0.0
572
Normal
0.0
498
Normal
0.0
874
Normal
0.0
196
Normal
0.0
568
Normal
0.0
1026
Normal
0.0
627
Tumor
0.0
858
Normal
0.0
615
Tumor
0.0
617
Tumor
0.0
922
Normal
0.0
187
Tumor
0.0
365
Tumor
0.0
218
Normal
0.0
851
Tumor
0.0
915
Tumor
0.0
944
Normal
0.0
1043
Tumor
0.0
394
Normal
0.0
866
Normal
0.0
344
Normal
0.0
488
Normal
0.0
642
Normal
0.0
818
Normal
0.0
881
Tumor
0.0
713
Tumor
0.0
327
Tumor
0.0
445
Tumor
0.0
461
Tumor
0.0
558
Normal
0.0
363
Tumor
-0.1
484
Normal
-0.1
444
Normal
-0.1
396
Normal
-0.1
912
Normal
-0.1
864
Normal
-0.1
142
Normal
-0.1
636
Normal
-0.1
567
Tumor
-0.1
746
Normal
-0.1
392
Normal
-0.1
686
Normal
-0.1
738
Normal
-0.1
375
Tumor
-0.1
492
Normal
-0.1
362
Normal
-0.1
968
Normal
-0.1
564
Normal
-0.1
852
Normal
-0.1
1015
Tumor
-0.1
526
Normal
-0.1
976
Normal
-0.1
366
Normal
-0.1
628
Normal
-0.1
867
Tumor
-0.1
964
Normal
-0.1
716
Normal
-0.1
618
Normal
-0.1
574
Normal
-0.1
514
Normal
-0.1
1016
Normal
-0.1
414
Normal
-0.1
546
Normal
-0.1
138
Normal
-0.1
376
Normal
-0.1
956
Normal
-0.1
882
Normal
-0.1
728
Normal
-0.1
416
Normal
-0.1
451
Tumor
-0.1
816
Normal
-0.1
426
Normal
-0.1
368
Normal
-0.1
916
Normal
-0.1
432
Normal
-0.1
214
Normal
-0.1
714
Normal
-0.1
386
Normal
-0.1
428
Normal
-0.1
436
Normal
-0.1
353
Tumor
-0.1
388
Normal
-0.1
172
Normal
-0.1
982
Normal
-0.1
474
Normal
-0.1
188
Normal
-0.1
952
Normal
-0.1
358
Normal
-0.1
918
Normal
-0.1
534
Normal
-0.1
298
Normal
-0.1
434
Normal
-0.1
1027
Tumor
-0.1
222
Normal
-0.2
868
Normal
-0.2
395
Tumor
-0.2
137
Tumor
-0.2
464
Normal
-0.2
723
Tumor
-0.2
162
Normal
-0.2
462
Normal
-0.2
132
Normal
-0.2
195
Tumor
-0.2
494
Normal
-0.2
424
Normal
-0.2
456
Normal
-0.2
742
Normal
-0.2
528
Normal
-0.2
518
Normal
-0.2
878
Normal
-0.2
745
Tumor
-0.2
911
Tumor
-0.2
136
Normal
-0.2
696
Normal
-0.2
148
Normal
-0.2
312
Normal
-0.2
466
Normal
-0.2
147
Tumor
-0.2
186
Normal
-0.2
332
Normal
-0.2
314
Normal
-0.2
257
Tumor
-0.2
697
Tumor
-0.2
278
Normal
-0.2
722
Normal
-0.3
446
Normal
-0.3
914
Normal
-0.3
452
Normal
-0.3
422
Normal
-0.3
468
Normal
-0.3
981
Tumor
-0.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.