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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C18orf32 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
14.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
12.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
12.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
12.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
11.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
11.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
10.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
10.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
9.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
9.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
9.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
9.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
8.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
8.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
8.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
8.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
7.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
7.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
7.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
7.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
7.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
7.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
7.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
7.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
7.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
7.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
6.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
6.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
6.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
6.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
6.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
6.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
6.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
6.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
6.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
6.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
6.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
5.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
5.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
5.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
5.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
5.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
5.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
5.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
5.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
5.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
5.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
5.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
5.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
5.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
5.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
5.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
5.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
5.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
5.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
5.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
5.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
5.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
5.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
5.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
5.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
5.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
4.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
4.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
4.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
4.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
4.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
4.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
4.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
4.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
4.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
4.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
4.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
4.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
4.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
4.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
4.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
4.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
4.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
4.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
4.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
4.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
4.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
4.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
4.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
4.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
4.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
4.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
4.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
4.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
4.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
4.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
4.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
4.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
4.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
4.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
4.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
4.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
4.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
4.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
4.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
4.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
4.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
4.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
3.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
3.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
3.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
3.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
3.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
3.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
3.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
3.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
3.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
3.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
3.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
3.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
3.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
3.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
3.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
3.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
3.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
3.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
3.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
3.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
3.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
3.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
3.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
3.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
3.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
3.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
3.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
3.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
3.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
3.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
3.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
3.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
3.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
3.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
3.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
3.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
3.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
3.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
3.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
3.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
3.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
3.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
3.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
3.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
3.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
3.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
3.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
3.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
3.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
3.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
3.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
3.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
3.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
3.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
3.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
3.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
2.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
2.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
2.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
2.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
2.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
2.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
2.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
2.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
2.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
2.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
2.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
2.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
2.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
2.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
2.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
2.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
2.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
2.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
2.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
2.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
2.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
2.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
2.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
2.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
2.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
2.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
2.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
2.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
2.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
2.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
2.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
2.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
2.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
2.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
2.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
2.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
2.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
2.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
2.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
2.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
2.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
2.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
2.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
2.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
2.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
2.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
2.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
2.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
2.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
2.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
2.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
2.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
2.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
2.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
2.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
2.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
2.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
2.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
2.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
2.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
2.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
2.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
2.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
2.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
2.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
2.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
1.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
1.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
1.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
1.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
1.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
1.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
1.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
1.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
1.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
1.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
1.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
1.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
1.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
1.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
1.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
1.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
1.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
0.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
0.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
0.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
0.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
0.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C18orf32 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.1
Number of samples
231
Samples
Sample
Description
TPM
DO45119
0 years, male, NA, stage:3, dead, 510 days
247.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
122.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
120.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
114.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
104.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
97.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
97.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
96.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
94.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
92.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
92.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
91.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
89.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
88.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
88.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
86.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
86.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
84.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
82.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
81.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
81.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
80.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
80.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
79.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
78.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
78.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
77.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
74.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
74.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
74.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
73.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
73.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
73.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
73.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
73.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
71.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
71.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
70.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
70.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
70.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
70.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
69.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
69.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
68.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
68.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
68.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
68.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
68.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
67.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
67.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
67.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
67.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
67.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
66.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
64.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
64.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
64.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
64.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
63.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
63.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
62.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
62.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
62.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
62.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
62.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
62.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
60.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
59.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
59.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
59.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
58.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
58.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
58.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
58.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
58.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
58.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
58.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
57.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
57.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
56.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
56.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
56.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
55.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
55.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
55.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
55.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
54.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
54.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
53.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
53.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
53.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
53.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
53.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
53.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
52.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
52.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
52.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
52.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
51.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
51.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
51.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
50.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
50.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
50.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
49.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
49.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
49.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
49.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
48.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
48.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
48.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
48.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
47.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
47.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
47.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
47.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
47.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
47.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
47.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
46.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
46.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
46.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
46.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
46.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
46.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
46.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
45.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
45.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
44.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
44.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
44.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
43.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
43.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
43.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
43.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
43.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
43.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
43.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
42.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
42.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
42.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
41.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
41.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
41.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
41.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
41.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
40.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
40.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
40.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
40.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
39.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
39.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
39.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
39.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
39.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
39.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
38.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
38.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
38.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
38.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
38.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
37.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
37.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
37.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
37.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
36.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
36.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
36.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
36.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
36.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
36.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
36.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
36.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
36.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
36.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
36.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
35.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
35.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
35.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
34.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
34.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
34.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
34.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
34.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
34.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
34.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
34.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
34.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
34.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
33.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
33.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
33.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
33.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
33.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
33.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
32.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
32.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
32.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
32.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
31.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
31.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
31.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
30.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
30.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
29.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
29.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
28.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
28.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
28.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
28.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
28.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
27.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
26.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
26.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
26.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
25.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
25.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
25.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
25.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
25.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
24.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
24.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
24.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
22.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
21.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
21.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
21.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
21.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
19.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
19.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
18.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
553
Tumor
2.1
1013
Tumor
2.0
915
Tumor
1.6
937
Tumor
1.6
1021
Tumor
1.5
741
Tumor
1.5
921
Tumor
1.5
777
Tumor
1.4
755
Tumor
1.3
341
Tumor
1.3
647
Tumor
1.3
923
Tumor
1.3
925
Tumor
1.3
477
Tumor
1.2
861
Tumor
1.2
823
Tumor
1.2
1025
Tumor
1.2
1041
Tumor
1.2
533
Tumor
1.1
977
Tumor
1.1
873
Tumor
1.0
487
Tumor
1.0
981
Tumor
1.0
1043
Tumor
1.0
471
Tumor
1.0
1045
Tumor
1.0
527
Tumor
1.0
697
Tumor
0.9
715
Tumor
0.9
957
Tumor
0.9
967
Tumor
0.8
955
Tumor
0.8
473
Tumor
0.8
1031
Tumor
0.8
493
Tumor
0.7
537
Tumor
0.7
737
Tumor
0.7
867
Tumor
0.7
484
Normal
0.7
911
Tumor
0.7
785
Tumor
0.7
1028
Normal
0.7
483
Tumor
0.7
878
Normal
0.6
492
Normal
0.6
615
Tumor
0.6
361
Tumor
0.6
535
Tumor
0.6
883
Tumor
0.6
327
Tumor
0.6
1015
Tumor
0.6
538
Normal
0.5
171
Tumor
0.5
1022
Normal
0.5
525
Tumor
0.5
231
Tumor
0.5
257
Tumor
0.5
983
Tumor
0.5
513
Tumor
0.5
481
Tumor
0.5
938
Normal
0.5
554
Normal
0.5
857
Tumor
0.5
1027
Tumor
0.5
355
Tumor
0.5
727
Tumor
0.5
944
Normal
0.4
1014
Normal
0.4
713
Tumor
0.4
975
Tumor
0.4
448
Normal
0.4
461
Tumor
0.4
952
Normal
0.4
363
Tumor
0.4
913
Tumor
0.4
494
Normal
0.4
536
Normal
0.4
982
Normal
0.4
515
Tumor
0.4
357
Tumor
0.4
497
Tumor
0.4
954
Normal
0.4
635
Tumor
0.4
491
Tumor
0.4
851
Tumor
0.4
874
Normal
0.4
455
Tumor
0.4
744
Normal
0.4
951
Tumor
0.4
488
Normal
0.4
968
Normal
0.3
746
Normal
0.3
443
Tumor
0.3
1026
Normal
0.3
141
Tumor
0.3
963
Tumor
0.3
721
Tumor
0.3
524
Normal
0.3
1042
Normal
0.3
956
Normal
0.3
685
Tumor
0.3
817
Tumor
0.3
297
Tumor
0.3
1016
Normal
0.3
966
Normal
0.3
268
Normal
0.3
387
Tumor
0.3
271
Tumor
0.3
563
Tumor
0.2
1032
Normal
0.2
431
Tumor
0.2
137
Tumor
0.2
738
Normal
0.2
698
Normal
0.2
815
Tumor
0.2
376
Normal
0.2
123
Tumor
0.2
212
Normal
0.2
914
Normal
0.2
127
Tumor
0.2
728
Normal
0.2
696
Normal
0.2
686
Normal
0.1
112
Tumor
0.1
411
Tumor
0.1
953
Tumor
0.1
545
Tumor
0.1
498
Normal
0.1
546
Normal
0.1
433
Tumor
0.1
313
Tumor
0.1
616
Normal
0.1
474
Normal
0.1
745
Tumor
0.1
924
Normal
0.1
976
Normal
0.1
228
Normal
0.1
714
Normal
0.1
627
Tumor
0.1
722
Normal
0.1
778
Normal
0.1
232
Normal
0.1
472
Normal
0.1
663
Tumor
0.1
534
Normal
0.1
881
Tumor
0.1
695
Tumor
0.1
367
Tumor
0.1
742
Normal
0.0
223
Tumor
0.0
142
Normal
0.0
984
Normal
0.0
852
Normal
0.0
813
Tumor
0.0
573
Tumor
0.0
145
Tumor
0.0
415
Tumor
0.0
1044
Normal
0.0
353
Tumor
0.0
518
Normal
0.0
362
Normal
0.0
816
Normal
0.0
863
Tumor
0.0
262
Normal
0.0
351
Tumor
0.0
221
Tumor
0.0
375
Tumor
0.0
516
Normal
0.0
261
Tumor
0.0
523
Tumor
0.0
916
Normal
0.0
422
Normal
0.0
557
Tumor
-0.1
882
Normal
-0.1
135
Tumor
-0.1
368
Normal
-0.1
447
Tumor
-0.1
354
Normal
-0.1
195
Tumor
-0.1
526
Normal
-0.1
258
Normal
-0.1
451
Tumor
-0.1
412
Normal
-0.1
628
Normal
-0.1
365
Tumor
-0.1
568
Normal
-0.1
423
Tumor
-0.1
478
Normal
-0.1
571
Tumor
-0.1
716
Normal
-0.1
222
Normal
-0.1
227
Tumor
-0.1
284
Normal
-0.1
383
Tumor
-0.1
462
Normal
-0.1
922
Normal
-0.1
272
Normal
-0.1
161
Tumor
-0.1
636
Normal
-0.1
482
Normal
-0.1
342
Normal
-0.1
211
Tumor
-0.2
445
Tumor
-0.2
138
Normal
-0.2
528
Normal
-0.2
384
Normal
-0.2
858
Normal
-0.2
564
Normal
-0.2
328
Normal
-0.2
298
Normal
-0.2
286
Normal
-0.2
517
Tumor
-0.2
465
Tumor
-0.2
393
Tumor
-0.2
862
Normal
-0.2
267
Tumor
-0.2
642
Normal
-0.2
452
Normal
-0.2
814
Normal
-0.2
224
Normal
-0.2
558
Normal
-0.2
344
Normal
-0.2
662
Normal
-0.2
278
Normal
-0.2
148
Normal
-0.2
366
Normal
-0.2
416
Normal
-0.2
648
Normal
-0.2
618
Normal
-0.2
965
Tumor
-0.2
958
Normal
-0.2
426
Normal
-0.2
128
Normal
-0.2
392
Normal
-0.2
665
Tumor
-0.3
434
Normal
-0.3
1046
Normal
-0.3
358
Normal
-0.3
574
Normal
-0.3
385
Tumor
-0.3
132
Normal
-0.3
572
Normal
-0.3
865
Tumor
-0.3
125
Tumor
-0.3
352
Normal
-0.3
436
Normal
-0.3
421
Tumor
-0.3
388
Normal
-0.3
456
Normal
-0.3
918
Normal
-0.3
464
Normal
-0.3
866
Normal
-0.3
824
Normal
-0.4
396
Normal
-0.4
136
Normal
-0.4
185
Tumor
-0.4
617
Tumor
-0.4
425
Tumor
-0.4
567
Tumor
-0.4
943
Tumor
-0.4
114
Normal
-0.4
964
Normal
-0.4
446
Normal
-0.4
466
Normal
-0.4
356
Normal
-0.4
311
Tumor
-0.5
414
Normal
-0.5
468
Normal
-0.5
427
Tumor
-0.5
214
Normal
-0.5
671
Tumor
-0.5
213
Tumor
-0.5
868
Normal
-0.5
131
Tumor
-0.5
386
Normal
-0.5
978
Normal
-0.5
664
Normal
-0.5
864
Normal
-0.5
283
Tumor
-0.5
444
Normal
-0.5
364
Normal
-0.5
111
Normal
-0.5
428
Normal
-0.5
343
Tumor
-0.5
424
Normal
-0.5
514
Normal
-0.5
312
Normal
-0.6
218
Normal
-0.6
818
Normal
-0.6
147
Tumor
-0.6
435
Tumor
-0.6
285
Tumor
-0.6
217
Tumor
-0.6
743
Tumor
-0.6
786
Normal
-0.6
162
Normal
-0.6
124
Normal
-0.6
391
Tumor
-0.6
277
Tumor
-0.6
877
Tumor
-0.6
146
Normal
-0.6
191
Tumor
-0.7
126
Normal
-0.7
196
Normal
-0.7
723
Tumor
-0.7
724
Normal
-0.7
641
Tumor
-0.7
413
Tumor
-0.7
394
Normal
-0.8
463
Tumor
-0.8
188
Normal
-0.8
432
Normal
-0.8
192
Normal
-0.8
756
Normal
-0.8
187
Tumor
-0.8
467
Tumor
-0.8
186
Normal
-0.8
395
Tumor
-0.9
172
Normal
-0.9
912
Normal
-0.9
672
Normal
-0.9
666
Normal
-0.9
884
Normal
-1.0
661
Tumor
-1.1
926
Normal
-1.3
331
Tumor
-1.4
917
Tumor
-1.4
113
Tumor
-1.5
332
Normal
-1.7
314
Normal
-1.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
