HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:9.7 nTPM
HPA Brain:67.4 nTPM
GTEx:9.7 nTPM
FANTOM5:86.4 Scaled Tags Per Million
Pig:30.0 nTPM
Mouse:43.5 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006313
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 67.4
Sample id Sample description nTPM
Hippocampus
nTPM: 60.1
2621 Female, age 67, right hemisphere 69.0
1855 Male, age 76, left hemisphere 66.6
2148 Female, age 91, left hemisphere 61.0
2529 Female, age 94, left hemisphere 57.2
1898 Male, age 80, left hemisphere 53.8
1911 Female, age 85, right hemisphere 53.2
Dentate gyrus
nTPM: 55.4
2530 Female, age 94, left hemisphere 61.6
2531 Female, age 67, both hemispheres 60.3
2246 Female, age 85, both hemispheres 55.7
1927 Female, age 91, both hemispheres 54.9
2010 Male, age 76, both hemispheres 54.4
2528 Male, age 74, both hemispheres 45.6
Entorhinal gyrus
nTPM: 67.4
2613 Female, age 94, left hemisphere 81.4
2764 Male, age 80, right hemisphere 73.2
1938 Female, age 85, left hemisphere 67.7
1787 Male, age 76, left hemisphere 64.6
2117 Female, age 91, right hemisphere 60.8
2686 Male, age 75, right hemisphere 56.5
Hippocampus, CA1
nTPM: 52.3
2045 Male, age 76, both hemispheres 61.9
2527 Male, age 74, both hemispheres 55.3
1873 Female, age 85, both hemispheres 53.8
2749 Male, age 80, left hemisphere 52.2
2082 Female, age 91, right hemisphere 38.3
Hippocampus, CA2
nTPM: 50.8
1940 Female, age 85, left hemisphere 63.3
2437 Female, age 94, left hemisphere 52.4
1963 Male, age 80, left hemisphere 49.7
1892 Male, age 76, both hemispheres 48.3
2249 Male, age 74, both hemispheres 47.4
2113 Female, age 91, right hemisphere 43.4
Hippocampus, CA3
nTPM: 56.2
2620 Female, age 94, left hemisphere 80.7
2861 Female, age 67, both hemispheres 68.6
1891 Female, age 85, both hemispheres 56.3
1867 Male, age 76, both hemispheres 45.3
2436 Male, age 74, both hemispheres 44.6
2137 Male, age 80, left hemisphere 41.9
Parahippocampal cortex
nTPM: 59.6
2622 Female, age 67, right hemisphere 80.2
2245 Female, age 91, both hemispheres 65.6
2532 Female, age 72, left hemisphere 65.4
2018 Male, age 76, both hemispheres 59.5
2692 Male, age 74, both hemispheres 59.4
1990 Female, age 91, right hemisphere 57.0
1933 Female, age 85, both hemispheres 56.7
2693 Female, age 94, both hemispheres 53.4
1850 Male, age 80, both hemispheres 53.3
2250 Female, age 67, right hemisphere 45.8
Perirhinal gyrus
nTPM: 57.4
1794 Male, age 80, right hemisphere 66.2
2848 Male, age 76, right hemisphere 59.0
1847 Female, age 91, left hemisphere 58.4
1841 Female, age 85, right hemisphere 52.0
2521 Female, age 94, right hemisphere 51.5
Subiculum
nTPM: 58.5
2619 Male, age 74, both hemispheres 71.3
2042 Male, age 76, both hemispheres 62.4
1977 Female, age 85, both hemispheres 61.6
1901 Male, age 80, both hemispheres 60.4
2729 Female, age 91, right hemisphere 50.9
2438 Female, age 94, left hemisphere 44.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 9.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.7
Samples: 197

Max nTPM: 17.7
Min nTPM: 4.5
Std nTPM: 2.1
Median nTPM: 9.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 17.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 16.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 16.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 15.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 14.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 14.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 13.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 13.4
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 13.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 12.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 12.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 86.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.4
FF:10169-103B7 60 years, female 96.5
FF:10153-102I9 76 years, female 76.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 30.0
Pig sample Sample description nTPM
Subiculum
nTPM: 28.5
Samples: 4

Max nTPM: 31.7
Min nTPM: 25.0
Sample A Female 31.7
Sample B Female 28.4
Sample C Male 28.9
Sample D Male 25.0
Dorsal hippocampus
nTPM: 28.4
Samples: 4

Max nTPM: 29.8
Min nTPM: 26.8
Sample A Female 29.8
Sample B Female 29.8
Sample C Male 27.3
Sample D Male 26.8
Entorhinal cortex
nTPM: 28.2
Samples: 4

Max nTPM: 30.2
Min nTPM: 26.7
Sample A Female 30.2
Sample B Female 27.0
Sample C Male 29.0
Sample D Male 26.7
Ventral hippocampus
nTPM: 30.0
Samples: 4

Max nTPM: 35.3
Min nTPM: 26.7
Sample A Female 28.7
Sample B Female 26.7
Sample C Male 35.3
Sample D Male 29.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 43.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.5
Samples: 4

Max nTPM: 45.8
Min nTPM: 40.9
Sample A Male 43.4
Sample B Male 43.8
Sample C Female 40.9
Sample D Female 45.8
Hippocampal formation
nTPM: 36.5
Samples: 4

Max nTPM: 38.9
Min nTPM: 33.0
Sample A Male 38.9
Sample B Male 37.8
Sample C Female 36.2
Sample D Female 33.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
70593328 Antisense, RP_050407_03_E02, Mouse strain C57BL/6J (56 days, male) 2.5
71211302 Antisense, RP_050816_01_B07, Mouse strain C57BL/6J (56 days, male) 0.4

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