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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EPS8L2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
221.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
168.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
155.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
133.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
119.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
119.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
106.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
98.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
94.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
94.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
91.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
90.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
88.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
87.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
86.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
83.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
81.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
80.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
78.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
77.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
76.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
74.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
71.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
69.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
69.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
68.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
68.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
67.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
66.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
66.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
65.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
65.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
65.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
62.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
61.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
60.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
60.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
60.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
59.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
59.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
59.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
59.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
59.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
59.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
59.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
58.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
58.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
57.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
57.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
57.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
56.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
56.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
54.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
54.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
54.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
53.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
53.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
53.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
53.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
52.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
52.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
52.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
52.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
52.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
51.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
50.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
50.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
50.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
50.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
50.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
49.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
49.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
48.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
48.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
48.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
48.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
47.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
47.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
46.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
46.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
46.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
46.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
46.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
46.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
45.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
45.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
45.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
45.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
45.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
45.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
44.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
44.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
44.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
44.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
44.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
44.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
44.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
44.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
43.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
43.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
42.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
42.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
42.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
41.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
41.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
41.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
40.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
40.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
40.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
40.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
39.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
39.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
39.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
39.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
39.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
39.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
39.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
39.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
39.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
38.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
38.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
38.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
38.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
38.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
38.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
37.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
37.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
37.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
37.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
37.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
37.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
37.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
37.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
37.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
37.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
36.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
36.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
36.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
36.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
35.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
35.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
35.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
35.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
35.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
35.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
34.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
34.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
34.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
34.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
33.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
33.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
33.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
33.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
33.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
33.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
33.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
32.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
32.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
32.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
32.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
32.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
32.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
31.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
31.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
31.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
31.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
31.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
31.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
30.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
30.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
30.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
30.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
30.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
30.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
30.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
30.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
29.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
29.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
29.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
29.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
29.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
29.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
28.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
28.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
28.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
28.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
28.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
28.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
28.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
28.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
27.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
27.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
27.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
27.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
27.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
27.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
27.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
27.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
26.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
26.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
26.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
26.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
26.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
26.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
26.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
26.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
26.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
25.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
25.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
25.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
25.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
25.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
25.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
25.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
24.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
24.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
24.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
24.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
24.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
24.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
24.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
24.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
23.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
23.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
23.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
23.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
23.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
23.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
23.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
23.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
23.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
23.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
23.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
22.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
22.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
22.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
22.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
22.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
22.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
21.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
21.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
21.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
21.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
21.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
21.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
21.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
21.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
21.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
20.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
20.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
20.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
20.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
20.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
20.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
20.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
19.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
19.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
19.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
19.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
19.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
18.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
18.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
18.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
18.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
17.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
17.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
17.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
17.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
17.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
17.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
17.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
17.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
17.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
17.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
16.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
16.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
16.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
16.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
16.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
16.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
16.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
16.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
16.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
15.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
15.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
15.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
15.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
15.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
15.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
15.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
14.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
14.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
14.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
14.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
14.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
14.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
13.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
13.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
13.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
13.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
13.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
12.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
12.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
12.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
12.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
12.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
12.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
12.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
12.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
12.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
11.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
11.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
11.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
10.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
10.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
10.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
9.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
9.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
9.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
9.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
9.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
8.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
8.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
8.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
8.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
8.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
7.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
7.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
7.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
7.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
6.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
6.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
6.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
5.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
4.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
4.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EPS8L2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.0
Number of samples
231
Samples
Sample
Description
TPM
DO23532
0 years, female, NA, stage:1, alive, 960 days
198.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
195.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
191.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
180.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
165.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
159.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
147.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
145.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
132.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
130.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
122.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
116.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
103.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
103.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
102.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
96.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
96.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
95.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
94.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
93.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
93.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
90.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
89.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
88.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
87.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
85.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
84.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
83.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
83.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
83.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
82.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
82.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
81.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
80.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
77.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
77.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
76.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
75.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
75.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
74.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
74.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
74.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
71.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
70.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
70.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
67.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
66.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
65.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
65.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
65.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
64.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
63.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
62.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
62.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
62.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
61.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
60.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
60.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
60.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
59.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
58.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
57.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
57.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
56.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
55.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
55.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
55.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
54.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
54.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
54.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
53.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
53.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
53.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
52.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
52.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
52.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
51.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
51.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
51.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
50.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
50.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
50.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
50.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
50.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
50.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
49.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
49.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
49.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
49.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
49.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
49.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
48.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
48.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
48.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
48.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
47.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
47.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
47.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
46.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
46.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
45.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
45.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
45.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
45.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
45.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
45.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
44.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
44.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
44.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
44.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
44.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
44.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
43.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
43.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
42.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
42.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
42.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
42.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
42.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
42.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
41.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
41.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
41.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
40.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
40.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
39.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
39.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
39.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
38.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
38.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
38.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
38.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
38.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
38.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
38.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
37.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
37.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
37.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
37.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
36.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
36.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
36.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
36.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
36.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
35.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
35.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
35.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
35.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
35.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
35.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
35.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
34.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
34.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
34.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
34.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
34.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
34.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
34.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
33.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
33.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
33.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
33.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
33.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
33.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
32.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
32.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
31.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
31.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
31.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
31.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
31.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
31.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
31.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
31.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
30.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
30.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
30.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
30.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
30.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
29.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
29.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
29.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
28.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
28.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
28.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
28.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
28.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
28.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
27.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
27.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
27.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
26.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
26.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
26.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
25.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
25.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
25.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
25.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
25.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
24.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
24.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
23.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
23.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
23.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
23.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
22.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
22.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
22.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
22.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
21.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
21.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
21.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
20.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
20.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
19.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
18.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
18.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
17.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
17.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
17.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
16.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
16.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
15.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
15.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
14.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
13.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
12.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
9.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
9.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
8.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
7.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1027
Tumor
1.8
147
Tumor
1.0
341
Tumor
0.8
257
Tumor
0.6
695
Tumor
0.6
713
Tumor
0.6
737
Tumor
0.5
957
Tumor
0.5
727
Tumor
0.5
465
Tumor
0.5
435
Tumor
0.5
513
Tumor
0.5
221
Tumor
0.5
865
Tumor
0.5
911
Tumor
0.5
327
Tumor
0.5
285
Tumor
0.5
824
Normal
0.5
484
Normal
0.5
533
Tumor
0.5
462
Normal
0.5
568
Normal
0.4
953
Tumor
0.4
738
Normal
0.4
1028
Normal
0.4
924
Normal
0.4
558
Normal
0.4
728
Normal
0.4
914
Normal
0.4
937
Tumor
0.4
742
Normal
0.4
862
Normal
0.4
1043
Tumor
0.4
436
Normal
0.4
1044
Normal
0.4
851
Tumor
0.4
1025
Tumor
0.4
628
Normal
0.4
1013
Tumor
0.4
416
Normal
0.3
1046
Normal
0.3
696
Normal
0.3
746
Normal
0.3
564
Normal
0.3
472
Normal
0.3
427
Tumor
0.3
468
Normal
0.3
641
Tumor
0.3
1026
Normal
0.3
461
Tumor
0.3
1042
Normal
0.3
926
Normal
0.3
1045
Tumor
0.3
474
Normal
0.3
466
Normal
0.3
786
Normal
0.3
671
Tumor
0.3
518
Normal
0.3
393
Tumor
0.3
878
Normal
0.3
456
Normal
0.3
864
Normal
0.3
951
Tumor
0.3
938
Normal
0.3
328
Normal
0.3
1022
Normal
0.2
114
Normal
0.2
298
Normal
0.2
723
Tumor
0.2
464
Normal
0.2
966
Normal
0.2
642
Normal
0.2
984
Normal
0.2
411
Tumor
0.2
918
Normal
0.2
553
Tumor
0.2
954
Normal
0.2
214
Normal
0.2
356
Normal
0.2
452
Normal
0.2
128
Normal
0.2
212
Normal
0.2
396
Normal
0.2
627
Tumor
0.2
186
Normal
0.2
141
Tumor
0.2
162
Normal
0.2
722
Normal
0.2
952
Normal
0.2
636
Normal
0.2
344
Normal
0.2
817
Tumor
0.2
616
Normal
0.2
1016
Normal
0.2
818
Normal
0.2
148
Normal
0.2
944
Normal
0.2
514
Normal
0.2
714
Normal
0.2
526
Normal
0.2
386
Normal
0.2
778
Normal
0.2
258
Normal
0.2
414
Normal
0.2
228
Normal
0.2
975
Tumor
0.2
368
Normal
0.2
277
Tumor
0.2
743
Tumor
0.2
912
Normal
0.2
515
Tumor
0.2
882
Normal
0.2
1014
Normal
0.2
365
Tumor
0.2
446
Normal
0.2
618
Normal
0.2
271
Tumor
0.2
968
Normal
0.2
873
Tumor
0.2
428
Normal
0.2
232
Normal
0.2
482
Normal
0.1
923
Tumor
0.1
964
Normal
0.1
648
Normal
0.1
647
Tumor
0.1
545
Tumor
0.1
142
Normal
0.1
868
Normal
0.1
137
Tumor
0.1
132
Normal
0.1
698
Normal
0.1
138
Normal
0.1
161
Tumor
0.1
171
Tumor
0.1
297
Tumor
0.1
286
Normal
0.1
392
Normal
0.1
313
Tumor
0.1
976
Normal
0.1
922
Normal
0.1
557
Tumor
0.1
394
Normal
0.1
415
Tumor
0.1
432
Normal
0.1
268
Normal
0.1
222
Normal
0.1
816
Normal
0.1
572
Normal
0.1
686
Normal
0.1
852
Normal
0.1
721
Tumor
0.1
111
Normal
0.1
1032
Normal
0.1
516
Normal
0.1
956
Normal
0.1
554
Normal
0.1
534
Normal
0.1
978
Normal
0.1
921
Tumor
0.1
481
Tumor
0.1
523
Tumor
0.1
284
Normal
0.1
478
Normal
0.1
528
Normal
0.1
666
Normal
0.1
136
Normal
0.1
354
Normal
0.1
364
Normal
0.1
563
Tumor
0.1
278
Normal
0.1
272
Normal
0.1
884
Normal
0.1
756
Normal
0.1
366
Normal
0.1
866
Normal
0.1
916
Normal
0.0
314
Normal
0.0
124
Normal
0.0
358
Normal
0.0
362
Normal
0.0
672
Normal
0.0
443
Tumor
0.0
981
Tumor
0.0
958
Normal
0.0
426
Normal
0.0
858
Normal
0.0
196
Normal
0.0
1021
Tumor
0.0
538
Normal
0.0
982
Normal
0.0
483
Tumor
0.0
883
Tumor
0.0
471
Tumor
0.0
448
Normal
0.0
125
Tumor
0.0
567
Tumor
0.0
955
Tumor
0.0
1015
Tumor
0.0
494
Normal
0.0
744
Normal
N/A
331
Tumor
0.0
422
Normal
0.0
517
Tumor
0.0
218
Normal
0.0
635
Tumor
0.0
463
Tumor
0.0
424
Normal
0.0
262
Normal
0.0
126
Normal
0.0
412
Normal
0.0
546
Normal
0.0
352
Normal
0.0
662
Normal
0.0
823
Tumor
0.0
716
Normal
0.0
423
Tumor
0.0
172
Normal
0.0
388
Normal
0.0
874
Normal
0.0
312
Normal
0.0
376
Normal
0.0
131
Tumor
0.0
1041
Tumor
-0.1
361
Tumor
-0.1
617
Tumor
-0.1
877
Tumor
-0.1
434
Normal
-0.1
488
Normal
-0.1
113
Tumor
-0.1
881
Tumor
-0.1
1031
Tumor
-0.1
357
Tumor
-0.1
355
Tumor
-0.1
353
Tumor
-0.1
983
Tumor
-0.1
574
Normal
-0.1
498
Normal
-0.1
188
Normal
-0.1
363
Tumor
-0.1
213
Tumor
-0.1
195
Tumor
-0.1
444
Normal
-0.1
925
Tumor
-0.1
127
Tumor
-0.1
915
Tumor
-0.2
342
Normal
-0.2
977
Tumor
-0.2
145
Tumor
-0.2
191
Tumor
-0.2
332
Normal
-0.2
455
Tumor
-0.2
451
Tumor
-0.2
525
Tumor
-0.2
123
Tumor
-0.2
217
Tumor
-0.2
224
Normal
-0.2
473
Tumor
-0.2
777
Tumor
-0.2
413
Tumor
-0.2
185
Tumor
-0.2
527
Tumor
-0.2
431
Tumor
-0.2
573
Tumor
-0.2
857
Tumor
-0.2
283
Tumor
-0.2
741
Tumor
-0.3
861
Tumor
-0.3
135
Tumor
-0.3
493
Tumor
-0.3
536
Normal
-0.3
395
Tumor
-0.3
917
Tumor
-0.3
445
Tumor
-0.3
867
Tumor
-0.3
146
Normal
-0.4
384
Normal
-0.4
524
Normal
-0.4
421
Tumor
-0.4
863
Tumor
-0.4
745
Tumor
-0.4
267
Tumor
-0.4
487
Tumor
-0.4
227
Tumor
-0.4
943
Tumor
-0.4
192
Normal
-0.4
537
Tumor
-0.4
571
Tumor
-0.4
367
Tumor
-0.4
433
Tumor
-0.4
311
Tumor
-0.4
492
Normal
-0.5
112
Tumor
-0.5
967
Tumor
-0.5
785
Tumor
-0.5
385
Tumor
-0.5
447
Tumor
-0.5
685
Tumor
-0.5
965
Tumor
-0.5
913
Tumor
-0.5
963
Tumor
-0.5
814
Normal
-0.5
615
Tumor
-0.5
497
Tumor
-0.5
724
Normal
-0.5
387
Tumor
-0.5
223
Tumor
-0.5
664
Normal
-0.6
813
Tumor
-0.6
467
Tumor
-0.6
477
Tumor
-0.7
187
Tumor
-0.7
715
Tumor
-0.7
261
Tumor
-0.8
665
Tumor
-0.8
343
Tumor
-0.8
697
Tumor
-0.8
535
Tumor
-0.8
383
Tumor
-0.9
375
Tumor
-0.9
491
Tumor
-0.9
425
Tumor
-1.0
755
Tumor
-1.1
231
Tumor
-1.2
815
Tumor
-1.2
663
Tumor
-1.2
351
Tumor
-1.2
211
Tumor
-1.5
391
Tumor
-1.5
661
Tumor
-1.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
