We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
166.3
nTPM
FANTOM5:
202.4
Scaled Tags Per Million
Pig:
7.8
nTPM
Allen mouse:
0.8
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
166.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 158.5
2090
Male, age 80, both hemispheres
187.6
2301
Female, age 85, both hemispheres
187.1
2188
Female, age 91, both hemispheres
177.9
1984
Male, age 76, both hemispheres
81.5
Dorsal cochlear nucleus nTPM: 145.5
2187
Female, age 91, both hemispheres
169.9
2370
Male, age 61, both hemispheres
155.8
2802
Male, age 74, right hemisphere
155.2
2378
Male, age 80, both hemispheres
137.5
2058
Male, age 76, both hemispheres
109.1
Dorsal tegmental nucleus nTPM: 127.6
2083
Male, age 80, both hemispheres
173.1
2326
Male, age 74, both hemispheres
146.7
1936
Male, age 76, left hemisphere
117.3
2358
Male, age 61, both hemispheres
73.3
Dorsolateral tegmental area nTPM: 133.7
2751
Female, age 85, both hemispheres
186.9
2654
Male, age 80, both hemispheres
165.9
2337
Male, age 61, both hemispheres
139.6
2360
Male, age 74, both hemispheres
92.1
2141
Male, age 76, both hemispheres
84.1
Kolliker-Fuse nucleus nTPM: 129.3
2793
Female, age 91, left hemisphere
171.2
2163
Male, age 80, both hemispheres
124.0
2315
Male, age 76, right hemisphere
92.5
Lateral lemniscal nuclei nTPM: 134.5
2320
Female, age 91, left hemisphere
166.0
2036
Male, age 80, both hemispheres
145.9
2746
Female, age 85, left hemisphere
144.1
2453
Male, age 74, right hemisphere
111.3
2169
Male, age 76, both hemispheres
105.1
Lateral parabrachial nucleus nTPM: 148.5
2792
Male, age 76, both hemispheres
175.9
2013
Male, age 80, both hemispheres
162.3
2790
Male, age 61, both hemispheres
154.7
2139
Female, age 85, right hemisphere
101.2
Lateral vestibular nucleus nTPM: 146.4
2311
Male, age 80, both hemispheres
163.3
2184
Male, age 76, both hemispheres
129.4
Locus coeruleus nTPM: 90.4
2162
Male, age 80, both hemispheres
113.5
2317
Female, age 72, unknown
109.1
2720
Male, age 74, both hemispheres
98.9
2014
Male, age 55, unknown
97.8
2123
Female, age 91, both hemispheres
78.8
1980
Male, age 76, both hemispheres
69.5
2788
Male, age 74, unknown
65.1
Medial parabrachial nucleus nTPM: 155.8
2463
Female, age 85, right hemisphere
195.5
2170
Female, age 91, both hemispheres
173.9
2156
Male, age 61, both hemispheres
143.2
2786
Male, age 76, both hemispheres
134.0
2854
Male, age 80, both hemispheres
132.3
Medial periolivary nuclei nTPM: 130.1
2081
Male, age 80, both hemispheres
191.1
2458
Female, age 91, both hemispheres
143.5
2063
Male, age 76, both hemispheres
119.1
2791
Male, age 74, right hemisphere
114.7
2171
Female, age 85, both hemispheres
81.8
Motor facial nucleus nTPM: 135.7
2126
Male, age 61, both hemispheres
231.0
2697
Female, age 85, both hemispheres
128.4
2795
Female, age 91, both hemispheres
123.2
2327
Male, age 80, both hemispheres
119.8
2062
Male, age 76, both hemispheres
107.2
2365
Male, age 74, right hemisphere
104.5
Motor trigeminal nucleus nTPM: 152.3
2321
Female, age 91, both hemispheres
187.9
2560
Male, age 74, both hemispheres
159.3
2335
Male, age 61, both hemispheres
147.3
2079
Male, age 80, both hemispheres
135.0
2309
Male, age 76, both hemispheres
132.1
Nuclei of the trapezoid body nTPM: 128.2
2166
Male, age 80, both hemispheres
163.9
2159
Male, age 61, both hemispheres
147.0
2368
Female, age 91, both hemispheres
141.8
1983
Male, age 76, both hemispheres
107.1
2735
Female, age 85, both hemispheres
81.1
Nucleus raphe magnus nTPM: 115.8
2051
Male, age 76, both hemispheres
152.1
2459
Female, age 91, both hemispheres
149.8
2328
Male, age 80, both hemispheres
145.9
2455
Male, age 74, both hemispheres
98.0
2160
Male, age 61, both hemispheres
84.4
2172
Female, age 85, both hemispheres
64.9
Paramedian reticular nucleus nTPM: 132.7
2057
Male, age 80, both hemispheres
162.1
2313
Male, age 61, both hemispheres
139.6
2052
Male, age 76, both hemispheres
116.9
2050
Female, age 85, both hemispheres
112.2
Pedunculopontine tegmental nucleus nTPM: 115.0
2334
Male, age 80, both hemispheres
137.6
1921
Female, age 85, both hemispheres
112.7
2338
Male, age 61, both hemispheres
94.7
Pontine nuclei nTPM: 148.0
2319
Female, age 91, both hemispheres
175.1
2115
Male, age 80, left hemisphere
171.5
2109
Female, age 72, unknown
169.9
2454
Male, age 74, left hemisphere
163.9
1968
Male, age 76, left hemisphere
152.4
2727
Male, age 61, right hemisphere
129.2
1863
Male, age 55, unknown
124.4
2787
Female, age 85, both hemispheres
97.5
Pontine raphe nucleus nTPM: 107.8
2853
Male, age 76, midline
116.3
2122
Female, age 85, midline
99.4
Posteroventral cochlear nucleus nTPM: 166.3
2135
Female, age 91, both hemispheres
205.6
2371
Male, age 61, both hemispheres
178.3
2341
Male, age 80, both hemispheres
173.9
2070
Male, age 76, both hemispheres
156.1
2752
Female, age 85, both hemispheres
117.4
Principal sensory trigeminal nucleus nTPM: 120.7
2367
Female, age 91, left hemisphere
150.5
2008
Male, age 80, left hemisphere
114.9
2324
Male, age 76, both hemispheres
110.8
2158
Male, age 61, both hemispheres
106.6
Reticular pontine nucleus, caudal nTPM: 161.5
2559
Male, age 74, both hemispheres
196.3
2457
Female, age 91, both hemispheres
171.7
2092
Male, age 76, both hemispheres
145.4
2332
Male, age 80, right hemisphere
132.8
Reticular pontine nucleus, oral nTPM: 146.5
2366
Female, age 91, both hemispheres
163.1
1939
Male, age 80, both hemispheres
155.4
2361
Male, age 74, both hemispheres
145.0
2167
Male, age 76, both hemispheres
144.3
2012
Female, age 85, both hemispheres
124.9
Reticulotegmental nucleus nTPM: 133.7
2452
Male, age 74, both hemispheres
155.6
2322
Female, age 91, both hemispheres
143.2
2333
Male, age 80, both hemispheres
140.4
2325
Male, age 76, both hemispheres
95.6
Spinal trigeminal nucleus, oral nTPM: 120.3
2164
Male, age 80, both hemispheres
142.3
1978
Male, age 76, both hemispheres
124.1
2737
Female, age 85, both hemispheres
94.4
Subcoeruleus area nTPM: 143.3
2369
Female, age 85, left hemisphere
196.7
2451
Male, age 74, both hemispheres
153.2
2089
Male, age 76, left hemisphere
145.2
1958
Male, age 80, both hemispheres
116.4
2323
Female, age 91, left hemisphere
104.9
Superior olive nTPM: 134.0
2020
Male, age 76, both hemispheres
163.9
2329
Male, age 80, right hemisphere
159.1
2561
Female, age 91, both hemispheres
142.6
2364
Male, age 74, right hemisphere
106.6
1875
Female, age 85, both hemispheres
97.8
Ventral periolivary nuclei nTPM: 117.0
2023
Male, age 76, both hemispheres
166.7
2165
Male, age 80, both hemispheres
120.9
2794
Female, age 91, left hemisphere
109.9
2130
Female, age 85, both hemispheres
70.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 130.8
2456
Female, age 91, both hemispheres
163.6
2161
Male, age 80, both hemispheres
144.9
1959
Male, age 76, both hemispheres
127.4
2359
Male, age 61, both hemispheres
121.0
2840
Female, age 85, both hemispheres
116.7
2449
Male, age 74, both hemispheres
111.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
7.8
Pig sample
Sample description
nTPM
Pons nTPM: 7.8
Samples: 4
Max nTPM: 11.5
Min nTPM: 5.0
Sample A
Female
11.5
Sample B
Female
7.5
Sample C
Male
7.3
Sample D
Male
5.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
