HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		91.606
RNA expressioni
Consensus:20.8 nTPM
HPA Brain:76.6 nTPM
GTEx:20.8 nTPM
FANTOM5:53.9 Scaled Tags Per Million
Pig:91.4 nTPM
Mouse:62.7 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA066498
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB079049
Hippocampal formation mean intensity 91.606
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 87.929
Molecular layer of the dentate gyrus 85.226
Granular dentate gyrus 61.344
CA1 - oriens layer 76.127
CA1 - pyramidal layer 47.788
CA1 - radiatum layer 81.700
CA2 - oriens layer 90.030
CA2 - pyramidal layer 62.989
CA2 - radiatum layer 86.756
CA3 - oriens layer 91.606
CA3 - pyramidal layer 57.320
CA3 - radiatum layer 88.244
Stratum lucidum 70.527
Lacunosum moleculare 60.817
Subiculum 55.800

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 76.6
Sample id Sample description nTPM
Hippocampus
nTPM: 32.9
2621 Female, age 67, right hemisphere 46.7
1898 Male, age 80, left hemisphere 33.2
2529 Female, age 94, left hemisphere 33.0
1911 Female, age 85, right hemisphere 32.0
2148 Female, age 91, left hemisphere 27.1
1855 Male, age 76, left hemisphere 25.4
Dentate gyrus
nTPM: 39.5
2530 Female, age 94, left hemisphere 56.6
2531 Female, age 67, both hemispheres 40.3
2528 Male, age 74, both hemispheres 39.1
2246 Female, age 85, both hemispheres 39.0
1927 Female, age 91, both hemispheres 33.2
2010 Male, age 76, both hemispheres 28.8
Entorhinal gyrus
nTPM: 64.5
2613 Female, age 94, left hemisphere 76.6
2686 Male, age 75, right hemisphere 74.7
1938 Female, age 85, left hemisphere 67.4
1787 Male, age 76, left hemisphere 62.4
2764 Male, age 80, right hemisphere 62.0
2117 Female, age 91, right hemisphere 43.7
Hippocampus, CA1
nTPM: 37.7
2082 Female, age 91, right hemisphere 50.5
2527 Male, age 74, both hemispheres 45.6
2749 Male, age 80, left hemisphere 42.8
1873 Female, age 85, both hemispheres 27.8
2045 Male, age 76, both hemispheres 21.8
Hippocampus, CA2
nTPM: 43.0
2249 Male, age 74, both hemispheres 52.4
2437 Female, age 94, left hemisphere 50.7
1940 Female, age 85, left hemisphere 47.7
2113 Female, age 91, right hemisphere 44.8
1892 Male, age 76, both hemispheres 35.9
1963 Male, age 80, left hemisphere 26.7
Hippocampus, CA3
nTPM: 34.7
2861 Female, age 67, both hemispheres 53.1
2436 Male, age 74, both hemispheres 34.3
2137 Male, age 80, left hemisphere 33.3
1867 Male, age 76, both hemispheres 32.5
1891 Female, age 85, both hemispheres 29.0
2620 Female, age 94, left hemisphere 26.2
Parahippocampal cortex
nTPM: 70.5
2622 Female, age 67, right hemisphere 103.6
2693 Female, age 94, both hemispheres 79.0
2250 Female, age 67, right hemisphere 74.8
2245 Female, age 91, both hemispheres 74.1
2532 Female, age 72, left hemisphere 73.6
1990 Female, age 91, right hemisphere 69.4
1850 Male, age 80, both hemispheres 69.0
1933 Female, age 85, both hemispheres 62.4
2692 Male, age 74, both hemispheres 59.5
2018 Male, age 76, both hemispheres 40.1
Perirhinal gyrus
nTPM: 76.6
1841 Female, age 85, right hemisphere 82.0
1847 Female, age 91, left hemisphere 78.2
2848 Male, age 76, right hemisphere 75.1
2521 Female, age 94, right hemisphere 74.6
1794 Male, age 80, right hemisphere 73.1
Subiculum
nTPM: 41.3
1977 Female, age 85, both hemispheres 58.7
2619 Male, age 74, both hemispheres 49.0
2438 Female, age 94, left hemisphere 47.7
1901 Male, age 80, both hemispheres 32.7
2729 Female, age 91, right hemisphere 30.0
2042 Male, age 76, both hemispheres 29.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 20.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.8
Samples: 197

Max nTPM: 88.8
Min nTPM: 1.6
Std nTPM: 12.9
Median nTPM: 18.7
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 88.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 70.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 67.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 62.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 54.3
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 50.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 50.7
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 50.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 48.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 47.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 44.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 53.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.9
FF:10153-102I9 76 years, female 57.0
FF:10169-103B7 60 years, female 50.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 91.4
Pig sample Sample description nTPM
Subiculum
nTPM: 68.3
Samples: 4

Max nTPM: 85.2
Min nTPM: 58.7
Sample A Female 85.2
Sample B Female 65.7
Sample C Male 63.5
Sample D Male 58.7
Dorsal hippocampus
nTPM: 56.6
Samples: 4

Max nTPM: 68.0
Min nTPM: 42.2
Sample A Female 62.8
Sample B Female 53.5
Sample C Male 68.0
Sample D Male 42.2
Entorhinal cortex
nTPM: 91.4
Samples: 4

Max nTPM: 119.2
Min nTPM: 76.1
Sample A Female 76.1
Sample B Female 119.2
Sample C Male 82.3
Sample D Male 87.9
Ventral hippocampus
nTPM: 56.1
Samples: 4

Max nTPM: 59.9
Min nTPM: 50.7
Sample A Female 59.9
Sample B Female 59.5
Sample C Male 50.7
Sample D Male 54.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 62.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.7
Samples: 4

Max nTPM: 70.5
Min nTPM: 52.3
Sample A Male 65.4
Sample B Male 70.5
Sample C Female 52.3
Sample D Female 62.5
Hippocampal formation
nTPM: 37.3
Samples: 4

Max nTPM: 41.5
Min nTPM: 32.7
Sample A Male 41.5
Sample B Male 40.3
Sample C Female 32.7
Sample D Female 34.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
73424184 Antisense, RP_051019_03_C12, Mouse strain C57BL/6J (56 days, male) 3.9

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