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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EID2 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
34.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
30.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
28.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
24.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
19.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
19.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
19.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
18.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
18.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
17.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
17.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
16.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
15.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
14.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
14.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
13.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
13.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
13.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
12.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
12.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
12.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
12.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
12.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
11.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
11.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
11.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
11.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
11.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
11.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
11.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
11.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
11.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
11.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
11.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
11.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
10.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
10.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
10.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
10.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
10.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
10.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
10.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
10.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
10.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
10.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
10.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
10.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
10.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
9.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
9.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
9.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
9.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
9.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
9.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
9.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
9.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
9.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
9.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
9.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
9.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
9.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
9.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
9.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
9.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
9.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
9.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
9.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
9.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
9.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
9.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
9.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
9.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
9.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
9.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
9.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
8.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
8.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
8.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
8.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
8.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
8.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
8.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
8.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
8.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
8.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
8.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
8.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
8.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
8.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
8.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
8.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
8.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
8.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
8.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
8.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
8.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
8.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
8.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
8.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
8.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
8.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
8.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
8.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
8.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
8.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
7.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
7.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
7.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
7.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
7.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
7.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
7.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
7.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
7.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
7.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
7.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
7.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
7.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
7.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
7.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
7.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
7.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
7.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
7.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
7.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
7.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
7.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
7.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
7.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
7.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
7.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
7.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
7.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
7.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
7.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
7.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
7.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
7.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
7.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
7.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
7.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
7.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
7.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
7.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
7.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
7.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
7.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
7.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
7.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
7.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
6.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
6.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
6.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
6.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
6.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
6.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
6.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
6.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
6.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
6.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
6.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
6.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
6.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
6.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
6.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
6.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
6.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
6.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
6.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
6.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
6.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
6.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
6.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
6.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
6.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
6.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
6.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
6.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
6.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
6.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
6.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
6.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
6.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
6.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
6.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
6.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
6.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
6.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
6.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
6.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
6.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
6.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
6.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
6.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
6.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
6.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
6.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
6.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
6.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
5.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
5.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
5.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
5.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
5.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
5.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
5.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
5.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
5.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
5.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
5.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
5.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
5.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
5.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
5.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
5.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
5.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
5.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
5.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
5.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
5.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
5.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
5.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
5.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
5.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
5.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
5.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
5.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
5.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
5.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
5.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
5.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
5.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
5.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
5.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
5.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
5.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
5.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
5.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
5.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
4.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
4.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
4.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
4.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
4.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
4.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
4.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
4.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
4.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
4.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
4.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
4.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
4.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
4.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
4.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
4.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
4.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
4.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
4.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
4.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
3.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
3.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
3.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
3.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
3.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
3.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
3.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
3.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
3.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
3.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
3.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
3.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
3.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
3.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
3.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
2.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EID2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.1
Number of samples
231
Samples
Sample
Description
TPM
DO50825
0 years, male, NA, stage:2, alive, 390 days
23.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
17.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
15.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
15.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
15.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
14.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
14.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
13.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
13.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
12.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
12.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
12.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
12.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
12.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
11.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
11.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
11.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
11.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
10.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
10.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
10.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
10.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
10.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
10.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
10.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
10.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
10.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
10.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
10.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
9.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
9.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
9.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
9.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
9.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
9.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
9.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
9.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
9.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
9.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
9.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
9.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
8.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
8.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
8.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
8.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
8.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
8.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
8.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
8.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
8.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
8.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
8.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
8.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
8.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
8.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
8.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
8.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
8.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
8.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
8.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
8.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
8.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
8.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
8.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
8.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
8.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
7.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
7.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
7.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
7.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
7.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
7.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
7.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
7.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
7.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
7.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
7.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
7.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
7.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
7.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
7.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
7.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
7.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
7.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
7.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
7.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
7.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
7.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
7.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
7.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
7.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
7.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
7.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
7.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
7.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
7.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
6.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
6.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
6.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
6.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
6.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
6.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
6.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
6.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
6.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
6.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
6.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
6.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
6.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
6.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
6.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
6.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
6.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
6.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
6.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
6.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
6.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
6.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
6.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
6.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
6.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
6.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
6.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
6.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
6.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
6.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
6.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
6.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
6.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
6.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
6.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
6.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
5.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
5.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
5.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
5.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
5.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
5.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
5.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
5.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
5.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
5.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
5.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
5.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
5.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
5.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
5.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
5.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
5.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
5.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
5.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
5.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
5.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
5.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
5.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
5.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
5.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
5.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
5.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
5.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
5.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
5.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
5.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
5.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
5.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
5.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
5.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
5.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
5.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
5.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
5.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
4.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
4.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
4.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
4.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
4.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
4.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
4.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
4.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
4.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
4.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
4.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
4.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
4.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
4.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
4.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
4.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
4.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
4.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
4.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
4.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
4.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
4.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
4.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
4.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
4.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
4.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
4.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
4.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
3.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
3.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
3.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
3.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
3.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
3.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
3.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
3.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
2.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
2.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
2.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
132
Normal
1.2
964
Normal
0.8
471
Tumor
0.7
131
Tumor
0.7
976
Normal
0.6
141
Tumor
0.6
958
Normal
0.6
461
Tumor
0.5
145
Tumor
0.5
883
Tumor
0.5
451
Tumor
0.5
456
Normal
0.4
911
Tumor
0.4
112
Tumor
0.4
913
Tumor
0.4
498
Normal
0.4
968
Normal
0.4
912
Normal
0.4
464
Normal
0.4
488
Normal
0.4
484
Normal
0.3
472
Normal
0.3
526
Normal
0.3
914
Normal
0.3
487
Tumor
0.3
514
Normal
0.3
452
Normal
0.3
881
Tumor
0.3
468
Normal
0.3
878
Normal
0.3
135
Tumor
0.3
128
Normal
0.3
114
Normal
0.3
672
Normal
0.3
966
Normal
0.2
466
Normal
0.2
465
Tumor
0.2
494
Normal
0.2
136
Normal
0.2
124
Normal
0.1
137
Tumor
0.1
877
Tumor
0.1
455
Tumor
0.1
111
Normal
0.1
518
Normal
0.1
467
Tumor
0.1
524
Normal
0.0
482
Normal
0.0
224
Normal
0.0
123
Tumor
0.0
284
Normal
0.0
882
Normal
0.0
126
Normal
0.0
666
Normal
-0.1
113
Tumor
-0.1
228
Normal
-0.1
957
Tumor
-0.1
671
Tumor
-0.1
665
Tumor
-0.1
515
Tumor
-0.1
474
Normal
-0.1
283
Tumor
-0.1
481
Tumor
-0.1
492
Normal
-0.1
493
Tumor
-0.1
664
Normal
-0.1
648
Normal
-0.2
513
Tumor
-0.2
286
Normal
-0.2
663
Tumor
-0.2
478
Normal
-0.3
491
Tumor
-0.3
975
Tumor
-0.3
523
Tumor
-0.3
462
Normal
-0.3
662
Normal
-0.3
212
Normal
-0.3
285
Tumor
-0.3
463
Tumor
-0.3
517
Tumor
-0.3
127
Tumor
-0.3
884
Normal
-0.4
125
Tumor
-0.4
516
Normal
-0.4
647
Tumor
-0.4
483
Tumor
-0.5
227
Tumor
-0.5
146
Normal
-0.5
963
Tumor
-0.5
497
Tumor
-0.5
211
Tumor
-0.5
661
Tumor
-0.6
223
Tumor
-0.6
965
Tumor
-0.6
138
Normal
-0.6
477
Tumor
-0.6
967
Tumor
-0.7
525
Tumor
-0.9
473
Tumor
-0.9
142
Normal
-1.3
351
Tumor
N/A
231
Tumor
N/A
352
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
354
Normal
N/A
355
Tumor
N/A
356
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
361
Tumor
N/A
362
Normal
N/A
363
Tumor
N/A
364
Normal
N/A
365
Tumor
N/A
366
Normal
N/A
367
Tumor
N/A
368
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
257
Tumor
N/A
258
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
387
Tumor
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
716
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
722
Normal
N/A
723
Tumor
N/A
724
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
755
Tumor
N/A
635
Tumor
N/A
756
Normal
N/A
636
Normal
N/A
641
Tumor
N/A
642
Normal
N/A
527
Tumor
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
421
Tumor
N/A
422
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
573
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
696
Normal
N/A
213
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
341
Tumor
N/A
221
Tumor
N/A
342
Normal
N/A
222
Normal
N/A
343
Tumor
N/A
344
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
