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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YES1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
47.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
33.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
33.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
32.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
31.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
30.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
29.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
29.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
26.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
26.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
25.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
24.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
24.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
24.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
23.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
23.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
23.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
23.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
22.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
22.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
22.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
22.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
21.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
21.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
21.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
20.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
20.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
20.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
20.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
20.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
20.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
20.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
20.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
20.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
19.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
19.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
19.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
19.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
19.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
19.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
19.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
19.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
18.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
18.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
18.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
18.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
18.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
18.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
18.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
18.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
17.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
17.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
17.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
17.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
17.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
17.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
17.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
17.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
17.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
17.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
17.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
17.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
17.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
16.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
16.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
16.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
16.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
16.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
16.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
16.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
16.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
15.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
15.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
15.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
15.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
15.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
15.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
15.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
15.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
15.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
15.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
15.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
15.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
15.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
15.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
15.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
15.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
15.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
15.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
14.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
14.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
14.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
14.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
14.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
14.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
14.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
14.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
14.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
14.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
14.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
14.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
14.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
14.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
14.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
14.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
14.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
14.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
14.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
14.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
13.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
13.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
13.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
13.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
13.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
13.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
13.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
13.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
13.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
13.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
13.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
12.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
12.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
12.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
12.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
12.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
12.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
12.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
12.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
12.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
12.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
12.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
12.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
12.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
12.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
12.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
12.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
12.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
12.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
12.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
12.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
12.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
11.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
11.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
11.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
11.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
11.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
11.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
11.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
11.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
11.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
11.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
11.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
11.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
11.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
11.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
11.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
11.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
11.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
11.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
11.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
11.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
11.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
11.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
11.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
11.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
11.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
10.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
10.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
10.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
10.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
10.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
10.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
10.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
10.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
10.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
10.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
10.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
10.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
10.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
10.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
10.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
10.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
10.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
10.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
10.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
10.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
10.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
10.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
10.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
9.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
9.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
9.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
9.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
9.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
9.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
9.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
9.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
9.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
9.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
9.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
9.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
9.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
9.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
9.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
9.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
9.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
9.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
9.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
9.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
9.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
9.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
8.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
8.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
8.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
8.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
8.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
8.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
8.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
8.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
8.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
8.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
8.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
8.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
8.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
8.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
8.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
8.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
8.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
8.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
8.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
8.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
8.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
8.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
7.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
7.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
7.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
7.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
7.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
7.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
7.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
7.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
7.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
7.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
7.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
7.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
7.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
7.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
7.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
7.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
7.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
7.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
7.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
7.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
7.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
7.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
6.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
6.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
6.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
6.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
6.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
6.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
6.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
6.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
6.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
6.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
6.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
6.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
6.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
6.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
6.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
6.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
6.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
6.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
6.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
6.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
5.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
5.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
5.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
5.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
5.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
5.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
5.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
5.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
5.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
5.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
5.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
4.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
4.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
3.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
3.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YES1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.6
Number of samples
231
Samples
Sample
Description
TPM
DO45193
0 years, female, NA, stage:4, dead, 120 days
43.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
40.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
34.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
32.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
32.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
30.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
29.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
28.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
27.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
25.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
25.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
24.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
23.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
22.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
22.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
22.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
22.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
22.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
21.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
21.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
21.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
21.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
21.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
20.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
20.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
20.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
20.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
19.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
19.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
19.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
19.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
19.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
18.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
18.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
18.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
18.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
18.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
18.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
18.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
18.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
18.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
18.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
18.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
18.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
17.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
17.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
17.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
17.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
17.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
17.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
17.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
17.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
17.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
16.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
16.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
16.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
16.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
16.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
16.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
16.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
16.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
16.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
16.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
15.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
15.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
15.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
15.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
15.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
15.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
15.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
15.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
15.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
15.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
15.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
15.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
14.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
14.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
14.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
14.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
14.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
14.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
14.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
14.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
14.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
14.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
14.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
14.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
14.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
14.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
14.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
14.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
13.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
13.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
13.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
13.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
13.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
13.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
13.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
13.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
13.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
13.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
13.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
13.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
13.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
13.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
13.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
13.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
13.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
13.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
13.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
13.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
12.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
12.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
12.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
12.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
12.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
12.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
12.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
12.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
12.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
12.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
12.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
12.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
12.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
12.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
12.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
12.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
12.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
12.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
12.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
12.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
12.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
12.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
11.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
11.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
11.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
11.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
11.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
11.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
11.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
11.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
11.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
11.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
11.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
11.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
11.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
10.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
10.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
10.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
10.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
10.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
10.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
10.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
10.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
10.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
10.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
10.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
10.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
10.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
10.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
9.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
9.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
9.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
9.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
9.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
9.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
9.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
9.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
9.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
9.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
9.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
9.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
9.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
9.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
8.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
8.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
8.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
8.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
8.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
8.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
8.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
8.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
8.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
8.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
8.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
8.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
7.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
7.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
7.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
7.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
7.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
7.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
7.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
7.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
7.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
7.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
7.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
7.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
7.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
7.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
7.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
7.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
7.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
7.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
7.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
6.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
6.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
6.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
6.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
6.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
6.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
6.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
6.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
6.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
5.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
4.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
4.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
4.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
3.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1025
Tumor
1.0
131
Tumor
0.6
421
Tumor
0.6
937
Tumor
0.6
271
Tumor
0.5
713
Tumor
0.5
567
Tumor
0.4
983
Tumor
0.4
877
Tumor
0.4
967
Tumor
0.4
127
Tumor
0.4
425
Tumor
0.4
686
Normal
0.4
517
Tumor
0.4
221
Tumor
0.4
661
Tumor
0.3
362
Normal
0.3
815
Tumor
0.3
497
Tumor
0.3
978
Normal
0.3
126
Normal
0.3
172
Normal
0.3
367
Tumor
0.3
666
Normal
0.3
376
Normal
0.3
422
Normal
0.3
447
Tumor
0.3
1014
Normal
0.3
451
Tumor
0.3
984
Normal
0.2
432
Normal
0.2
446
Normal
0.2
468
Normal
0.2
414
Normal
0.2
262
Normal
0.2
387
Tumor
0.2
111
Normal
0.2
648
Normal
0.2
1021
Tumor
0.2
148
Normal
0.2
738
Normal
0.2
162
Normal
0.2
723
Tumor
0.2
443
Tumor
0.2
463
Tumor
0.2
662
Normal
0.2
696
Normal
0.2
664
Normal
0.2
132
Normal
0.2
285
Tumor
0.2
356
Normal
0.2
865
Tumor
0.2
558
Normal
0.2
186
Normal
0.2
494
Normal
0.2
385
Tumor
0.2
722
Normal
0.2
1016
Normal
0.2
742
Normal
0.2
424
Normal
0.2
142
Normal
0.2
824
Normal
0.2
568
Normal
0.2
368
Normal
0.2
448
Normal
0.2
136
Normal
0.2
461
Tumor
0.2
1031
Tumor
0.2
114
Normal
0.2
1042
Normal
0.2
428
Normal
0.2
572
Normal
0.2
698
Normal
0.2
436
Normal
0.2
384
Normal
0.2
914
Normal
0.2
716
Normal
0.2
358
Normal
0.1
956
Normal
0.1
1043
Tumor
0.1
778
Normal
0.1
884
Normal
0.1
188
Normal
0.1
982
Normal
0.1
426
Normal
0.1
514
Normal
0.1
212
Normal
0.1
862
Normal
0.1
128
Normal
0.1
353
Tumor
0.1
564
Normal
0.1
746
Normal
0.1
553
Tumor
0.1
365
Tumor
0.1
851
Tumor
0.1
462
Normal
0.1
416
Normal
0.1
138
Normal
0.1
1046
Normal
0.1
728
Normal
0.1
135
Tumor
0.1
573
Tumor
0.1
272
Normal
0.1
714
Normal
0.1
464
Normal
0.1
695
Tumor
0.1
434
Normal
0.1
363
Tumor
0.1
413
Tumor
0.1
944
Normal
0.1
344
Normal
0.1
366
Normal
0.1
574
Normal
0.1
261
Tumor
0.1
185
Tumor
0.1
817
Tumor
0.1
864
Normal
0.1
466
Normal
0.1
526
Normal
0.1
917
Tumor
0.1
818
Normal
0.1
342
Normal
0.1
482
Normal
0.1
628
Normal
0.1
528
Normal
0.1
456
Normal
0.1
455
Tumor
0.1
465
Tumor
0.1
866
Normal
0.1
671
Tumor
0.1
926
Normal
0.1
786
Normal
0.1
636
Normal
0.1
312
Normal
0.1
756
Normal
0.1
525
Tumor
0.1
412
Normal
0.1
975
Tumor
0.1
352
Normal
0.1
858
Normal
0.1
672
Normal
0.1
394
Normal
0.1
196
Normal
0.1
964
Normal
0.1
452
Normal
0.1
474
Normal
0.1
518
Normal
0.1
744
Normal
0.1
284
Normal
0.1
952
Normal
0.1
113
Tumor
0.1
286
Normal
0.1
354
Normal
0.1
195
Tumor
0.0
388
Normal
0.0
392
Normal
0.0
217
Tumor
0.0
1032
Normal
0.0
232
Normal
0.0
147
Tumor
0.0
484
Normal
0.0
881
Tumor
0.0
534
Normal
0.0
258
Normal
0.0
912
Normal
0.0
1022
Normal
0.0
214
Normal
0.0
228
Normal
0.0
616
Normal
0.0
467
Tumor
0.0
938
Normal
0.0
218
Normal
0.0
396
Normal
0.0
868
Normal
0.0
954
Normal
0.0
977
Tumor
0.0
968
Normal
0.0
146
Normal
0.0
641
Tumor
0.0
537
Tumor
0.0
1013
Tumor
0.0
471
Tumor
0.0
715
Tumor
0.0
976
Normal
0.0
332
Normal
0.0
444
Normal
0.0
223
Tumor
0.0
1044
Normal
0.0
852
Normal
0.0
472
Normal
0.0
918
Normal
0.0
642
Normal
0.0
124
Normal
0.0
314
Normal
0.0
533
Tumor
0.0
187
Tumor
0.0
231
Tumor
0.0
665
Tumor
0.0
391
Tumor
0.0
364
Normal
0.0
618
Normal
0.0
1028
Normal
0.0
192
Normal
0.0
721
Tumor
0.0
386
Normal
0.0
498
Normal
0.0
882
Normal
0.0
563
Tumor
0.0
341
Tumor
0.0
867
Tumor
0.0
546
Normal
0.0
965
Tumor
0.0
328
Normal
0.0
535
Tumor
0.0
222
Normal
0.0
213
Tumor
0.0
966
Normal
0.0
816
Normal
0.0
878
Normal
0.0
1026
Normal
0.0
922
Normal
0.0
527
Tumor
0.0
874
Normal
0.0
524
Normal
0.0
488
Normal
0.0
327
Tumor
0.0
571
Tumor
0.0
916
Normal
0.0
516
Normal
0.0
697
Tumor
0.0
278
Normal
0.0
915
Tumor
0.0
538
Normal
0.0
536
Normal
0.0
1015
Tumor
-0.1
331
Tumor
-0.1
283
Tumor
-0.1
298
Normal
-0.1
958
Normal
-0.1
125
Tumor
-0.1
861
Tumor
-0.1
257
Tumor
-0.1
737
Tumor
-0.1
297
Tumor
-0.1
311
Tumor
-0.1
743
Tumor
-0.1
924
Normal
-0.1
557
Tumor
-0.1
343
Tumor
-0.1
224
Normal
-0.1
963
Tumor
-0.1
427
Tumor
-0.1
393
Tumor
-0.1
647
Tumor
-0.1
493
Tumor
-0.1
492
Normal
-0.1
395
Tumor
-0.1
481
Tumor
-0.1
478
Normal
-0.1
277
Tumor
-0.1
814
Normal
-0.1
823
Tumor
-0.1
415
Tumor
-0.1
227
Tumor
-0.1
813
Tumor
-0.1
375
Tumor
-0.1
1041
Tumor
-0.1
873
Tumor
-0.1
445
Tumor
-0.1
627
Tumor
-0.1
515
Tumor
-0.2
951
Tumor
-0.2
433
Tumor
-0.2
171
Tumor
-0.2
487
Tumor
-0.2
663
Tumor
-0.2
123
Tumor
-0.2
883
Tumor
-0.2
483
Tumor
-0.2
268
Normal
-0.2
191
Tumor
-0.2
741
Tumor
-0.2
925
Tumor
-0.2
955
Tumor
-0.2
145
Tumor
-0.2
857
Tumor
-0.2
141
Tumor
-0.2
911
Tumor
-0.2
161
Tumor
-0.2
137
Tumor
-0.2
943
Tumor
-0.2
615
Tumor
-0.2
1045
Tumor
-0.2
554
Normal
-0.2
423
Tumor
-0.2
777
Tumor
-0.2
981
Tumor
-0.2
351
Tumor
-0.3
383
Tumor
-0.3
724
Normal
-0.3
411
Tumor
-0.3
545
Tumor
-0.3
491
Tumor
-0.3
267
Tumor
-0.3
957
Tumor
-0.3
435
Tumor
-0.3
635
Tumor
-0.3
361
Tumor
-0.4
211
Tumor
-0.4
921
Tumor
-0.4
953
Tumor
-0.4
863
Tumor
-0.4
431
Tumor
-0.4
923
Tumor
-0.4
313
Tumor
-0.4
477
Tumor
-0.4
112
Tumor
-0.4
523
Tumor
-0.4
617
Tumor
-0.4
357
Tumor
-0.5
513
Tumor
-0.5
755
Tumor
-0.5
785
Tumor
-0.5
355
Tumor
-0.5
727
Tumor
-0.5
1027
Tumor
-0.5
473
Tumor
-0.5
685
Tumor
-0.5
745
Tumor
-0.5
913
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
