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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
B3GALT6 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
29.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
21.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
19.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
17.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
17.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
17.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
17.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
17.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
16.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
16.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
16.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
16.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
15.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
15.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
14.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
14.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
14.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
14.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
14.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
14.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
14.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
14.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
14.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
13.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
13.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
13.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
13.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
13.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
13.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
12.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
12.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
12.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
12.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
12.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
12.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
12.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
12.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
12.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
12.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
12.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
12.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
11.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
11.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
11.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
11.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
11.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
11.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
11.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
11.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
11.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
11.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
11.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
11.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
11.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
11.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
10.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
10.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
10.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
10.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
10.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
10.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
10.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
10.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
10.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
10.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
10.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
10.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
10.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
10.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
10.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
10.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
10.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
9.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
9.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
9.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
9.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
9.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
9.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
9.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
9.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
9.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
9.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
9.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
9.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
9.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
9.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
9.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
9.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
9.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
9.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
9.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
9.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
9.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
9.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
9.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
9.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
9.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
9.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
9.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
9.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
8.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
8.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
8.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
8.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
8.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
8.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
8.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
8.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
8.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
8.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
8.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
8.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
8.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
8.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
8.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
8.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
8.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
8.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
8.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
8.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
8.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
8.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
8.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
8.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
8.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
8.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
8.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
8.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
8.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
8.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
8.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
7.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
7.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
7.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
7.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
7.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
7.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
7.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
7.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
7.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
7.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
7.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
7.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
7.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
7.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
7.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
7.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
7.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
7.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
7.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
7.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
7.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
7.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
7.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
7.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
7.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
7.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
7.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
7.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
7.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
7.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
7.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
7.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
7.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
7.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
6.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
6.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
6.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
6.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
6.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
6.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
6.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
6.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
6.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
6.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
6.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
6.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
6.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
6.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
6.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
6.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
6.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
6.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
6.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
6.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
6.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
6.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
6.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
6.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
6.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
6.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
6.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
6.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
6.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
6.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
6.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
6.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
6.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
6.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
6.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
6.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
6.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
6.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
6.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
6.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
6.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
6.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
6.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
6.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
5.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
5.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
5.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
5.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
5.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
5.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
5.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
5.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
5.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
5.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
5.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
5.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
5.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
5.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
5.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
5.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
5.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
5.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
5.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
5.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
5.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
5.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
5.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
5.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
5.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
5.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
5.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
5.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
5.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
5.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
5.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
4.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
4.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
4.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
4.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
4.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
4.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
4.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
4.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
4.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
4.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
4.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
4.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
4.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
4.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
4.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
4.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
4.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
4.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
4.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
4.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
4.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
4.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
4.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
4.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
4.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
3.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
3.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
3.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
3.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
3.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
3.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
3.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
3.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
3.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
3.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
3.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
3.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
3.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
3.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
3.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
3.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
3.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
2.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
2.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
2.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
2.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
2.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
2.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
B3GALT6 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.7
Number of samples
231
Samples
Sample
Description
TPM
DO45217
0 years, female, NA, stage:3, dead, 270 days
24.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
22.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
21.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
21.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
17.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
15.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
14.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
14.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
13.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
13.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
13.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
12.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
12.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
12.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
11.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
11.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
10.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
10.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
10.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
10.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
10.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
10.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
10.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
10.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
10.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
10.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
9.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
9.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
9.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
9.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
9.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
9.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
9.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
8.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
8.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
8.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
8.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
8.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
8.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
8.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
7.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
7.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
7.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
7.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
7.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
7.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
7.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
7.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
7.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
7.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
7.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
7.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
7.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
7.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
7.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
7.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
6.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
6.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
6.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
6.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
6.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
6.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
6.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
6.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
6.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
6.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
6.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
6.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
6.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
6.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
6.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
6.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
6.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
6.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
5.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
5.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
5.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
5.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
5.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
5.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
5.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
5.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
5.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
5.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
5.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
5.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
5.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
5.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
5.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
5.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
5.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
5.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
5.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
5.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
5.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
5.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
5.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
5.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
5.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
5.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
5.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
5.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
5.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
5.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
5.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
5.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
5.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
4.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
4.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
4.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
4.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
4.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
4.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
4.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
4.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
4.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
4.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
4.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
4.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
4.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
4.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
4.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
4.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
4.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
4.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
4.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
4.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
4.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
4.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
4.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
4.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
4.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
4.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
4.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
4.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
4.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
4.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
4.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
4.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
3.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
3.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
3.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
3.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
3.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
3.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
3.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
3.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
3.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
3.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
3.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
3.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
3.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
3.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
3.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
3.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
3.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
3.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
3.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
3.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
3.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
3.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
3.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
3.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
3.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
3.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
3.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
3.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
3.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
3.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
3.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
3.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
3.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
3.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
3.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
3.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
3.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
3.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
3.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
3.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
2.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
2.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
2.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
2.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
2.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
2.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
2.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
2.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
2.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
2.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
2.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
2.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
2.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
2.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
2.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
2.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
2.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
2.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
2.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
2.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
2.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
2.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
2.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
2.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
2.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
2.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
2.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
2.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
2.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
2.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
2.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
1.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
1.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
1.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
1.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
1.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
0.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
743
Tumor
1.3
395
Tumor
1.1
685
Tumor
1.1
413
Tumor
1.1
112
Tumor
0.9
123
Tumor
0.9
913
Tumor
0.8
967
Tumor
0.8
124
Normal
0.7
473
Tumor
0.6
1015
Tumor
0.6
661
Tumor
0.6
867
Tumor
0.6
863
Tumor
0.6
557
Tumor
0.6
427
Tumor
0.6
385
Tumor
0.6
527
Tumor
0.6
471
Tumor
0.6
192
Normal
0.6
125
Tumor
0.5
1041
Tumor
0.5
185
Tumor
0.5
368
Normal
0.5
943
Tumor
0.5
641
Tumor
0.5
977
Tumor
0.5
257
Tumor
0.5
114
Normal
0.5
111
Normal
0.5
383
Tumor
0.4
297
Tumor
0.4
187
Tumor
0.4
415
Tumor
0.4
283
Tumor
0.4
467
Tumor
0.4
981
Tumor
0.4
1044
Normal
0.4
671
Tumor
0.4
741
Tumor
0.4
627
Tumor
0.4
213
Tumor
0.4
162
Normal
0.4
231
Tumor
0.4
1027
Tumor
0.4
126
Normal
0.3
146
Normal
0.3
635
Tumor
0.3
343
Tumor
0.3
478
Normal
0.3
536
Normal
0.3
573
Tumor
0.3
956
Normal
0.3
171
Tumor
0.3
186
Normal
0.3
958
Normal
0.3
713
Tumor
0.3
285
Tumor
0.3
952
Normal
0.3
533
Tumor
0.3
161
Tumor
0.3
433
Tumor
0.3
384
Normal
0.3
491
Tumor
0.3
366
Normal
0.3
546
Normal
0.3
721
Tumor
0.3
911
Tumor
0.3
217
Tumor
0.3
696
Normal
0.2
375
Tumor
0.2
113
Tumor
0.2
172
Normal
0.2
444
Normal
0.2
392
Normal
0.2
727
Tumor
0.2
883
Tumor
0.2
917
Tumor
0.2
388
Normal
0.2
227
Tumor
0.2
554
Normal
0.2
463
Tumor
0.2
451
Tumor
0.2
513
Tumor
0.2
1042
Normal
0.2
976
Normal
0.2
261
Tumor
0.2
877
Tumor
0.2
492
Normal
0.2
232
Normal
0.2
148
Normal
0.2
923
Tumor
0.2
524
Normal
0.2
881
Tumor
0.2
271
Tumor
0.2
195
Tumor
0.2
868
Normal
0.2
964
Normal
0.2
461
Tumor
0.2
493
Tumor
0.2
344
Normal
0.2
341
Tumor
0.2
188
Normal
0.2
538
Normal
0.2
1045
Tumor
0.2
138
Normal
0.2
214
Normal
0.2
128
Normal
0.2
396
Normal
0.2
618
Normal
0.2
1021
Tumor
0.2
813
Tumor
0.2
412
Normal
0.2
376
Normal
0.2
452
Normal
0.1
386
Normal
0.1
268
Normal
0.1
814
Normal
0.1
311
Tumor
0.1
642
Normal
0.1
434
Normal
0.1
218
Normal
0.1
636
Normal
0.1
416
Normal
0.1
525
Tumor
0.1
714
Normal
0.1
394
Normal
0.1
221
Tumor
0.1
647
Tumor
0.1
474
Normal
0.1
663
Tumor
0.1
443
Tumor
0.1
615
Tumor
0.1
191
Tumor
0.1
951
Tumor
0.1
528
Normal
0.1
224
Normal
0.1
357
Tumor
0.1
361
Tumor
0.1
534
Normal
0.1
963
Tumor
0.1
968
Normal
0.1
616
Normal
0.1
722
Normal
0.1
571
Tumor
0.1
222
Normal
0.1
423
Tumor
0.1
354
Normal
0.1
526
Normal
0.1
617
Tumor
0.1
436
Normal
0.1
365
Tumor
0.1
137
Tumor
0.1
955
Tumor
0.1
132
Normal
0.1
455
Tumor
0.1
141
Tumor
0.1
483
Tumor
0.1
136
Normal
0.1
858
Normal
0.1
563
Tumor
0.0
698
Normal
0.0
352
Normal
0.0
728
Normal
0.0
966
Normal
0.0
351
Tumor
0.0
196
Normal
0.0
422
Normal
0.0
926
Normal
0.0
545
Tumor
0.0
498
Normal
0.0
553
Tumor
0.0
916
Normal
0.0
862
Normal
0.0
666
Normal
0.0
1026
Normal
0.0
432
Normal
0.0
127
Tumor
0.0
448
Normal
0.0
665
Tumor
0.0
145
Tumor
0.0
421
Tumor
0.0
468
Normal
0.0
716
Normal
0.0
456
Normal
0.0
367
Tumor
0.0
1014
Normal
0.0
464
Normal
0.0
142
Normal
0.0
362
Normal
0.0
446
Normal
0.0
697
Tumor
0.0
975
Tumor
0.0
686
Normal
0.0
978
Normal
0.0
497
Tumor
0.0
918
Normal
0.0
982
Normal
0.0
262
Normal
0.0
353
Tumor
0.0
884
Normal
0.0
393
Tumor
0.0
695
Tumor
0.0
445
Tumor
0.0
313
Tumor
0.0
1028
Normal
0.0
818
Normal
0.0
984
Normal
-0.1
515
Tumor
-0.1
922
Normal
-0.1
914
Normal
-0.1
1016
Normal
-0.1
938
Normal
-0.1
574
Normal
-0.1
284
Normal
-0.1
628
Normal
-0.1
228
Normal
-0.1
874
Normal
-0.1
1022
Normal
-0.1
135
Tumor
-0.1
223
Tumor
-0.1
355
Tumor
-0.1
342
Normal
-0.1
1032
Normal
-0.1
715
Tumor
-0.1
1046
Normal
-0.1
466
Normal
-0.1
742
Normal
-0.1
915
Tumor
-0.1
272
Normal
-0.1
425
Tumor
-0.1
662
Normal
-0.1
864
Normal
-0.1
816
Normal
-0.1
664
Normal
-0.1
514
Normal
-0.1
1031
Tumor
-0.1
481
Tumor
-0.1
882
Normal
-0.1
738
Normal
-0.1
356
Normal
-0.1
258
Normal
-0.1
535
Tumor
-0.1
477
Tumor
-0.1
924
Normal
-0.1
866
Normal
-0.1
852
Normal
-0.1
363
Tumor
-0.1
286
Normal
-0.1
494
Normal
-0.1
358
Normal
-0.1
267
Tumor
-0.1
755
Tumor
-0.1
944
Normal
-0.1
861
Tumor
-0.1
744
Normal
-0.1
912
Normal
-0.2
567
Tumor
-0.2
211
Tumor
-0.2
447
Tumor
-0.2
387
Tumor
-0.2
465
Tumor
-0.2
778
Normal
-0.2
558
Normal
-0.2
1043
Tumor
-0.2
823
Tumor
-0.2
516
Normal
-0.2
488
Normal
-0.2
724
Normal
-0.2
484
Normal
-0.2
954
Normal
-0.2
414
Normal
-0.2
462
Normal
-0.2
482
Normal
-0.2
746
Normal
-0.2
737
Tumor
-0.2
298
Normal
-0.2
1025
Tumor
-0.2
426
Normal
-0.2
723
Tumor
-0.2
435
Tumor
-0.2
824
Normal
-0.2
472
Normal
-0.2
212
Normal
-0.2
431
Tumor
-0.2
131
Tumor
-0.2
785
Tumor
-0.2
147
Tumor
-0.2
983
Tumor
-0.2
327
Tumor
-0.3
312
Normal
-0.3
564
Normal
-0.3
572
Normal
-0.3
391
Tumor
-0.3
953
Tumor
-0.3
786
Normal
-0.3
424
Normal
-0.3
672
Normal
-0.3
328
Normal
-0.3
428
Normal
-0.3
873
Tumor
-0.3
518
Normal
-0.3
364
Normal
-0.3
865
Tumor
-0.3
487
Tumor
-0.3
1013
Tumor
-0.3
817
Tumor
-0.3
332
Normal
-0.3
278
Normal
-0.3
756
Normal
-0.3
965
Tumor
-0.3
921
Tumor
-0.4
568
Normal
-0.4
277
Tumor
-0.4
411
Tumor
-0.4
857
Tumor
-0.4
517
Tumor
-0.4
878
Normal
-0.4
777
Tumor
-0.4
937
Tumor
-0.5
957
Tumor
-0.5
851
Tumor
-0.5
925
Tumor
-0.5
537
Tumor
-0.5
331
Tumor
-0.6
523
Tumor
-0.7
745
Tumor
-0.8
648
Normal
-0.9
815
Tumor
-0.9
314
Normal
-1.0
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.