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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LYSMD3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
33.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
23.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
22.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
22.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
18.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
17.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
16.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
16.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
15.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
14.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
14.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
14.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
13.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
13.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
13.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
12.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
12.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
11.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
11.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
11.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
11.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
10.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
10.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
10.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
10.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
9.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
9.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
9.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
8.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
8.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
8.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
8.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
8.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
7.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
7.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
6.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
6.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
6.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
6.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
5.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
4.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
4.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
2.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LYSMD3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
56.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
54.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
34.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
31.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
30.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
30.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
29.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
28.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
27.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
26.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
25.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
25.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
25.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
24.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
24.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
24.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
24.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
23.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
23.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
23.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
22.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
22.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
22.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
21.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
21.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
21.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
21.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
21.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
21.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
20.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
20.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
20.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
20.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
20.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
20.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
20.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
20.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
19.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
19.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
19.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
19.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
19.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
19.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
19.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
18.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
18.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
18.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
18.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
18.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
18.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
18.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
18.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
18.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
18.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
18.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
18.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
18.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
18.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
17.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
17.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
17.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
17.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
17.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
17.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
17.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
17.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
17.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
17.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
16.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
16.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
16.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
16.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
16.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
16.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
16.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
16.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
16.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
16.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
16.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
16.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
16.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
16.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
16.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
16.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
16.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
16.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
16.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
15.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
15.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
15.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
15.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
15.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
15.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
15.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
15.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
15.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
15.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
15.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
15.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
15.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
15.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
15.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
15.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
14.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
14.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
14.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
14.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
14.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
14.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
14.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
14.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
14.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
14.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
14.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
14.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
14.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
14.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
14.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
14.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
14.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
14.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
14.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
14.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
14.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
13.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
13.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
13.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
13.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
13.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
13.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
13.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
13.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
13.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
13.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
13.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
13.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
13.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
13.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
13.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
13.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
13.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
13.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
13.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
13.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
13.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
13.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
13.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
13.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
13.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
13.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
13.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
13.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
13.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
13.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
12.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
12.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
12.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
12.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
12.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
12.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
12.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
12.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
12.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
12.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
12.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
12.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
12.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
12.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
12.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
11.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
11.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
11.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
11.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
11.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
11.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
11.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
11.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
11.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
11.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
11.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
11.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
11.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
11.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
11.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
11.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
11.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
11.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
11.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
11.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
11.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
10.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
10.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
10.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
10.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
10.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
10.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
10.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
10.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
10.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
10.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
10.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
10.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
10.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
10.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
10.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
10.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
10.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
10.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
10.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
10.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
10.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
10.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
10.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
10.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
10.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
10.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
10.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
10.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
10.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
9.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
9.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
9.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
9.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
9.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
9.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
9.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
9.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
9.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
9.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
9.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
9.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
9.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
9.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
9.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
9.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
9.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
9.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
9.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
8.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
8.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
8.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
8.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
8.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
8.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
8.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
8.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
8.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
8.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
8.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
8.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
8.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
8.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
8.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
8.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
8.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
8.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
8.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
8.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
8.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
7.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
7.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
7.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
7.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
7.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
7.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
7.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
7.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
7.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
7.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
7.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
7.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
7.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
6.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
6.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
6.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
6.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
6.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
6.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
6.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
6.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
6.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
6.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
6.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
6.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
6.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
6.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
6.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
6.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
6.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
6.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
6.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
6.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
6.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
6.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
6.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
6.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
5.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
5.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
5.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
5.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
5.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
5.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
5.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
5.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
5.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
5.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
5.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
5.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
5.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
5.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
5.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
5.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
5.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
4.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
4.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
4.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
4.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
4.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
4.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
4.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
4.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
4.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
4.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
4.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
4.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
4.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
4.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
4.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
4.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
4.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
3.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
3.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
3.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
3.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
3.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
3.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
3.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
3.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
3.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
3.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
3.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
3.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
3.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
3.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
3.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
3.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
3.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
2.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
2.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
2.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
2.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
2.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
2.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LYSMD3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
39.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
34.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
30.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
27.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
26.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
25.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
25.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
24.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
24.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
24.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
24.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
24.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
23.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
23.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
22.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
22.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
22.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
22.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
21.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
21.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
21.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
20.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
20.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
19.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
19.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
19.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
19.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
19.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
18.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
18.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
18.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
18.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
17.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
17.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
17.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
16.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
16.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
16.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
16.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
16.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
15.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
15.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
15.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
15.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
15.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
15.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
15.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
15.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
15.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
14.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
14.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
13.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
13.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
13.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
12.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
12.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
12.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
12.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
12.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
12.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
12.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
12.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
11.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
10.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
10.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
10.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
9.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
8.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
7.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
7.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
7.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
6.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
5.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LYSMD3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
55.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
27.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
24.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
21.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
18.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
17.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
14.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
14.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
14.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
14.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
13.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
13.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
13.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
13.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
13.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
13.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
12.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
12.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
12.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
12.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
12.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
12.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
11.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
11.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
11.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
11.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
11.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
11.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
10.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
10.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
10.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
10.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
10.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
10.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
9.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
9.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
9.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
9.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
9.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
9.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
9.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
9.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
8.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
8.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
8.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
8.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
8.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
8.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
8.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
8.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
8.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
8.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
8.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
8.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
8.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
8.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
8.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
8.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
8.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
7.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
7.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
7.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
7.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
7.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
7.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
7.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
7.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
7.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
7.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
7.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
7.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
7.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
7.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
7.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
7.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
7.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
7.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
7.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
7.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
6.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
6.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
6.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
6.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
6.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
6.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
6.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
6.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
6.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
6.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
6.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
6.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
6.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
6.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
6.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
6.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
6.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
6.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
6.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
6.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
5.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
5.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
5.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
5.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
5.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
5.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
5.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
5.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
5.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
5.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
5.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
5.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
5.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
5.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
5.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
5.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
5.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
5.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
5.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
5.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
5.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
5.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
5.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
5.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
5.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
5.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
5.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
5.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
5.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
5.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
5.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
5.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
5.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
5.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
5.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
5.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
4.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
4.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
4.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
4.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
4.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
4.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
4.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
4.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
4.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
4.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
4.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
4.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
4.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
4.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
4.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
4.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
4.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
4.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
4.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
4.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
4.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
4.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
4.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
4.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
4.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
4.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
4.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
4.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
3.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
3.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
3.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
3.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
3.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
3.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
3.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
3.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
3.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
3.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
3.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
3.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
3.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
3.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
3.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
3.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
3.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
3.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
3.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
3.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
3.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
3.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
3.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
3.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
3.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
3.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
3.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
3.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
3.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
3.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
2.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
2.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
2.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
2.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
2.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
2.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
2.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
2.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
2.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
2.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
2.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
2.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
2.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
2.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
2.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
2.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
2.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
1.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
1.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
1.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
1.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
1.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
1.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0092290003
Tumor
1.1
CPT0065930003
Tumor
1.1
CPT0014160003
Tumor
1.0
CPT0012550003
Tumor
0.9
CPT0007860003
Tumor
0.9
CPT0001180009
Tumor
0.8
CPT0077310003
Tumor
0.7
CPT0065690003
Tumor
0.7
CPT0017410003
Tumor
0.7
CPT0001500009
Tumor
0.7
CPT0092790003
Tumor
0.6
CPT0081880003
Tumor
0.6
CPT0066470004
Tumor
0.5
CPT0001340003
Tumor
0.5
CPT0025290003
Tumor
0.5
CPT0020120003
Tumor
0.5
CPT0076330003
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0025580004
Tumor
0.5
CPT0014370004
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0025170003
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0012920003
Normal
0.3
CPT0089020003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0006950001
Normal
0.3
CPT0065810003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0023350003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0001220008
Tumor
0.2
CPT0012900004
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0081990003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0077140001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0087050003
Normal
0.0
CPT0010120001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0084560003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0079180003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0009060003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0088970003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0086890003
Normal
-0.2
CPT0075130003
Tumor
-0.2
CPT0014130001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0078660003
Tumor
-0.2
CPT0001260009
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0084590001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0075170001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0013790003
Normal
-0.4
CPT0001230001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0078670001
Normal
-0.5
CPT0077320001
Normal
-0.5
CPT0065820001
Normal
-0.5
CPT0001270001
Normal
-0.5
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0088570001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0079380003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0078940001
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0017850003
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0078840001
Normal
N/A
CPT0088640003
Normal
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014470001
Normal
N/A
CPT0069160003
Tumor
N/A
CPT0079230003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0063640001
Normal
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0012090003
Normal
N/A
CPT0077490003
Tumor
N/A
CPT0066520001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0012180003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0065450001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0089460004
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001540009
Tumor
N/A
CPT0000640003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0012290003
Normal
N/A
CPT0023690003
Tumor
N/A
CPT0000660001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
