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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MLXIP is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
22.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
20.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
19.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
17.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
16.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
16.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
15.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
15.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
15.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
15.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
14.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
13.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
13.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
13.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
12.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
12.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
12.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
12.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
12.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
12.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
11.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
11.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
11.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
11.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
11.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
11.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
11.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
11.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
11.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
11.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
11.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
11.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
10.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
10.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
10.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
10.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
10.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
10.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
10.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
10.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
10.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
10.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
10.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
10.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
10.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
10.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
10.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
10.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
10.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
9.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
9.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
9.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
9.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
9.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
9.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
9.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
9.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
9.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
9.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
9.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
9.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
9.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
9.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
9.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
9.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
9.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
8.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
8.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
8.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
8.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
8.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
8.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
8.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
8.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
8.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
8.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
8.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
8.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
8.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
8.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
8.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
8.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
7.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
7.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
7.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
7.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
7.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
7.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
7.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
7.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
7.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
7.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
7.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
7.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
7.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
7.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
7.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
7.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
7.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
7.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
7.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
6.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
6.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
6.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
6.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
6.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
6.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
6.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
6.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
6.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
6.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
6.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
6.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
6.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
6.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
6.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
6.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
6.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
6.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
6.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
6.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
6.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
6.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
6.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
6.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
6.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
6.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
5.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
5.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
5.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
5.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
5.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
5.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
5.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
5.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
5.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
5.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
5.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
5.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
5.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
5.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
5.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
5.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
5.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
5.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
5.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
5.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
5.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
5.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
5.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
5.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
5.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
5.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
5.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
5.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
5.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
5.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
5.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
5.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
5.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
5.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
5.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
5.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
5.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
5.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
4.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
4.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
4.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
4.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
4.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
4.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
4.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
4.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
4.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
4.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
4.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
4.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
4.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
4.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
4.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
4.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
4.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
4.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
4.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
4.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
4.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
4.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
4.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
4.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
4.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
4.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
4.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
4.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
4.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
4.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
4.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
4.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
4.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
4.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
4.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
4.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
4.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
4.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
4.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
4.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
4.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
4.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
3.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
3.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
3.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
3.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
3.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
3.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
3.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
3.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
3.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
3.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
3.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
3.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
3.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
3.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
3.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
3.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
3.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
3.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
3.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
3.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
3.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
3.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
3.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
3.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
3.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
3.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
3.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
3.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
3.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
3.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
3.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
3.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
3.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
3.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
3.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
3.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
3.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
2.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
2.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
2.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
2.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
2.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
2.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
2.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
2.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
2.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
2.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
2.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
2.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
2.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
2.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
2.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
2.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
2.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
1.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MLXIP is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.4
Number of samples
231
Samples
Sample
Description
TPM
DO23544
0 years, male, NA, stage:2, alive, 960 days
28.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
17.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
16.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
15.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
14.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
14.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
14.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
12.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
12.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
12.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
11.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
11.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
11.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
11.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
11.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
11.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
10.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
10.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
10.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
10.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
10.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
10.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
9.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
9.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
9.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
9.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
9.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
9.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
9.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
9.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
9.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
8.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
8.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
8.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
8.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
8.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
8.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
8.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
8.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
7.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
7.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
7.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
7.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
7.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
7.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
7.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
7.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
7.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
7.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
7.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
7.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
7.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
7.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
7.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
6.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
6.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
6.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
6.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
6.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
6.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
6.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
6.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
6.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
6.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
6.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
6.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
6.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
6.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
6.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
6.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
6.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
6.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
6.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
6.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
6.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
5.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
5.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
5.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
5.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
5.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
5.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
5.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
5.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
5.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
5.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
5.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
5.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
5.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
5.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
5.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
5.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
5.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
5.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
5.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
5.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
5.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
5.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
5.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
5.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
5.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
5.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
5.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
4.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
4.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
4.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
4.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
4.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
4.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
4.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
4.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
4.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
4.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
4.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
4.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
4.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
4.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
4.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
4.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
4.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
4.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
4.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
4.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
4.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
4.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
4.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
4.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
4.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
4.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
4.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
4.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
4.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
3.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
3.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
3.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
3.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
3.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
3.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
3.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
3.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
3.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
3.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
3.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
3.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
3.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
3.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
3.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
3.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
3.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
3.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
3.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
3.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
3.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
3.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
3.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
3.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
3.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
3.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
3.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
3.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
3.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
3.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
3.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
3.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
3.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
3.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
3.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
3.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
3.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
3.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
3.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
3.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
2.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
2.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
2.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
2.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
2.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
2.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
2.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
2.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
2.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
2.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
2.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
2.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
2.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
2.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
2.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
2.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
2.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
2.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
2.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
2.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
2.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
2.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
2.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
2.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
2.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
2.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
2.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
2.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
2.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
2.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
2.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
2.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
2.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
2.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
2.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
2.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
2.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
2.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
2.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
1.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
1.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
1.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
1.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
1.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
1.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
1.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
1.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
1.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
1.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
435
Tumor
1.5
231
Tumor
1.3
445
Tumor
1.0
171
Tumor
1.0
431
Tumor
1.0
443
Tumor
0.9
395
Tumor
0.9
277
Tumor
0.8
911
Tumor
0.8
957
Tumor
0.8
915
Tumor
0.7
161
Tumor
0.7
865
Tumor
0.6
363
Tumor
0.6
444
Normal
0.6
261
Tumor
0.6
147
Tumor
0.6
815
Tumor
0.6
861
Tumor
0.6
327
Tumor
0.6
415
Tumor
0.5
433
Tumor
0.5
478
Normal
0.5
283
Tumor
0.5
267
Tumor
0.5
517
Tumor
0.5
514
Normal
0.5
185
Tumor
0.5
663
Tumor
0.5
128
Normal
0.5
943
Tumor
0.5
487
Tumor
0.4
145
Tumor
0.4
257
Tumor
0.4
424
Normal
0.4
141
Tumor
0.4
446
Normal
0.4
647
Tumor
0.4
432
Normal
0.4
423
Tumor
0.4
665
Tumor
0.4
353
Tumor
0.4
937
Tumor
0.4
497
Tumor
0.4
361
Tumor
0.4
414
Normal
0.4
818
Normal
0.3
332
Normal
0.3
314
Normal
0.3
627
Tumor
0.3
436
Normal
0.3
364
Normal
0.3
528
Normal
0.3
498
Normal
0.3
977
Tumor
0.3
524
Normal
0.3
546
Normal
0.3
298
Normal
0.3
492
Normal
0.3
461
Tumor
0.3
392
Normal
0.3
636
Normal
0.3
616
Normal
0.3
124
Normal
0.3
114
Normal
0.3
642
Normal
0.3
351
Tumor
0.2
428
Normal
0.2
488
Normal
0.2
355
Tumor
0.2
393
Tumor
0.2
481
Tumor
0.2
376
Normal
0.2
534
Normal
0.2
342
Normal
0.2
172
Normal
0.2
538
Normal
0.2
483
Tumor
0.2
755
Tumor
0.2
224
Normal
0.2
817
Tumor
0.2
162
Normal
0.2
618
Normal
0.2
526
Normal
0.2
344
Normal
0.2
388
Normal
0.2
426
Normal
0.2
698
Normal
0.2
494
Normal
0.2
268
Normal
0.2
434
Normal
0.2
232
Normal
0.2
778
Normal
0.2
482
Normal
0.2
1046
Normal
0.2
661
Tumor
0.2
328
Normal
0.2
356
Normal
0.2
862
Normal
0.2
422
Normal
0.2
491
Tumor
0.2
258
Normal
0.1
271
Tumor
0.1
352
Normal
0.1
493
Tumor
0.1
965
Tumor
0.1
111
Normal
0.1
1041
Tumor
0.1
472
Normal
0.1
354
Normal
0.1
212
Normal
0.1
484
Normal
0.1
857
Tumor
0.1
357
Tumor
0.1
867
Tumor
0.1
628
Normal
0.1
883
Tumor
0.1
137
Tumor
0.1
278
Normal
0.1
384
Normal
0.1
394
Normal
0.1
741
Tumor
0.1
211
Tumor
0.1
777
Tumor
0.1
944
Normal
0.1
824
Normal
0.1
975
Tumor
0.1
884
Normal
0.1
921
Tumor
0.1
448
Normal
0.1
416
Normal
0.1
412
Normal
0.1
386
Normal
0.1
513
Tumor
0.1
662
Normal
0.1
672
Normal
0.1
518
Normal
0.1
938
Normal
0.1
272
Normal
0.1
1027
Tumor
0.1
954
Normal
0.1
396
Normal
0.1
912
Normal
0.1
785
Tumor
0.1
1013
Tumor
0.0
358
Normal
0.0
671
Tumor
0.0
127
Tumor
0.0
878
Normal
0.0
474
Normal
0.0
387
Tumor
0.0
473
Tumor
0.0
146
Normal
0.0
964
Normal
0.0
722
Normal
0.0
313
Tumor
0.0
713
Tumor
0.0
365
Tumor
0.0
666
Normal
0.0
366
Normal
0.0
851
Tumor
0.0
515
Tumor
0.0
874
Normal
0.0
112
Tumor
0.0
953
Tumor
0.0
823
Tumor
0.0
186
Normal
0.0
284
Normal
0.0
362
Normal
0.0
126
Normal
0.0
881
Tumor
0.0
132
Normal
0.0
882
Normal
0.0
864
Normal
0.0
982
Normal
0.0
926
Normal
0.0
951
Tumor
0.0
142
Normal
0.0
343
Tumor
0.0
312
Normal
0.0
922
Normal
0.0
648
Normal
0.0
341
Tumor
0.0
297
Tumor
0.0
955
Tumor
0.0
527
Tumor
0.0
523
Tumor
0.0
615
Tumor
0.0
471
Tumor
-0.1
685
Tumor
-0.1
462
Normal
-0.1
641
Tumor
-0.1
664
Normal
-0.1
391
Tumor
-0.1
956
Normal
-0.1
516
Normal
-0.1
635
Tumor
-0.1
756
Normal
-0.1
981
Tumor
-0.1
696
Normal
-0.1
724
Normal
-0.1
1015
Tumor
-0.1
187
Tumor
-0.1
715
Tumor
-0.1
525
Tumor
-0.1
924
Normal
-0.1
745
Tumor
-0.1
786
Normal
-0.1
746
Normal
-0.1
968
Normal
-0.1
918
Normal
-0.1
136
Normal
-0.1
223
Tumor
-0.1
914
Normal
-0.1
923
Tumor
-0.1
858
Normal
-0.1
228
Normal
-0.1
916
Normal
-0.1
984
Normal
-0.1
742
Normal
-0.1
952
Normal
-0.1
285
Tumor
-0.2
1014
Normal
-0.2
138
Normal
-0.2
967
Tumor
-0.2
873
Tumor
-0.2
1016
Normal
-0.2
286
Normal
-0.2
868
Normal
-0.2
1031
Tumor
-0.2
447
Tumor
-0.2
262
Normal
-0.2
1026
Normal
-0.2
1028
Normal
-0.2
148
Normal
-0.2
737
Tumor
-0.2
814
Normal
-0.2
852
Normal
-0.2
135
Tumor
-0.2
1045
Tumor
-0.2
125
Tumor
-0.2
553
Tumor
-0.2
1043
Tumor
-0.2
411
Tumor
-0.2
976
Normal
-0.3
813
Tumor
-0.3
1044
Normal
-0.3
617
Tumor
-0.3
421
Tumor
-0.3
866
Normal
-0.3
477
Tumor
-0.3
966
Normal
-0.3
1025
Tumor
-0.3
686
Normal
-0.3
413
Tumor
-0.3
816
Normal
-0.3
716
Normal
-0.3
188
Normal
-0.3
1021
Tumor
-0.3
963
Tumor
-0.3
925
Tumor
-0.3
554
Normal
-0.3
368
Normal
-0.3
545
Tumor
-0.3
385
Tumor
-0.3
695
Tumor
-0.3
913
Tumor
-0.3
123
Tumor
-0.3
1042
Normal
-0.3
721
Tumor
-0.4
877
Tumor
-0.4
978
Normal
-0.4
1032
Normal
-0.4
863
Tumor
-0.4
331
Tumor
-0.4
738
Normal
-0.4
1022
Normal
-0.4
714
Normal
-0.5
536
Normal
-0.5
744
Normal
-0.5
227
Tumor
-0.5
427
Tumor
-0.5
537
Tumor
-0.5
723
Tumor
-0.5
311
Tumor
-0.5
533
Tumor
-0.5
375
Tumor
-0.6
425
Tumor
-0.6
983
Tumor
-0.6
131
Tumor
-0.6
113
Tumor
-0.6
728
Normal
-0.6
917
Tumor
-0.7
958
Normal
-0.8
727
Tumor
-0.8
383
Tumor
-0.8
697
Tumor
-0.8
743
Tumor
-0.9
367
Tumor
-1.0
535
Tumor
-1.4
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
564
Normal
N/A
567
Tumor
N/A
568
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
452
Normal
N/A
573
Tumor
N/A
574
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
221
Tumor
N/A
463
Tumor
N/A
222
Normal
N/A
464
Normal
N/A
465
Tumor
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
