We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DRAP1 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
109.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
359.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
280.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
244.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
237.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
232.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
212.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
205.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
202.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
202.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
200.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
195.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
189.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
188.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
185.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
185.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
181.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
179.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
177.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
177.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
177.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
176.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
175.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
175.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
173.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
173.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
172.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
171.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
170.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
169.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
169.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
168.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
167.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
167.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
167.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
166.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
162.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
161.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
160.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
160.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
159.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
159.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
157.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
156.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
156.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
156.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
155.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
153.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
153.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
152.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
151.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
149.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
148.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
148.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
148.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
147.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
147.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
147.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
146.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
146.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
146.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
146.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
146.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
144.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
143.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
143.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
142.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
142.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
142.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
141.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
141.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
141.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
140.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
140.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
140.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
140.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
139.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
138.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
138.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
137.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
136.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
136.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
135.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
135.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
134.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
134.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
133.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
133.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
133.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
132.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
131.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
131.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
130.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
130.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
129.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
129.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
128.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
128.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
128.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
127.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
126.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
126.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
126.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
125.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
125.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
125.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
125.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
124.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
124.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
124.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
124.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
123.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
122.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
122.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
121.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
121.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
120.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
120.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
119.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
119.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
119.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
119.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
118.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
118.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
118.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
118.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
117.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
117.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
117.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
116.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
116.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
116.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
115.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
115.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
115.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
115.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
115.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
115.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
115.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
115.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
115.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
114.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
114.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
114.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
112.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
112.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
112.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
111.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
111.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
111.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
111.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
110.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
110.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
110.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
110.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
110.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
110.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
109.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
109.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
108.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
108.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
108.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
108.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
108.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
108.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
107.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
107.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
107.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
106.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
106.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
106.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
106.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
106.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
106.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
106.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
106.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
106.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
105.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
105.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
105.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
105.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
105.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
104.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
104.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
104.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
104.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
104.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
103.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
103.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
103.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
103.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
102.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
102.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
102.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
102.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
102.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
102.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
101.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
101.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
101.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
101.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
100.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
100.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
100.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
100.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
100.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
100.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
99.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
98.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
98.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
98.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
97.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
97.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
96.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
96.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
95.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
95.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
94.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
94.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
94.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
94.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
94.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
94.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
93.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
93.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
93.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
93.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
92.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
92.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
91.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
91.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
91.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
91.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
91.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
90.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
90.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
90.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
90.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
90.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
90.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
89.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
88.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
88.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
88.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
88.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
88.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
87.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
87.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
87.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
87.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
86.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
86.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
86.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
86.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
86.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
85.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
85.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
85.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
84.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
84.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
83.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
83.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
83.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
83.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
82.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
82.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
82.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
82.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
82.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
81.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
81.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
81.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
80.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
80.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
80.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
79.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
79.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
79.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
79.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
79.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
78.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
78.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
78.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
77.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
77.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
76.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
76.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
76.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
76.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
75.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
74.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
74.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
74.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
73.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
73.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
73.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
72.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
72.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
72.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
72.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
72.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
72.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
72.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
71.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
71.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
70.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
70.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
70.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
70.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
69.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
69.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
68.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
68.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
67.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
67.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
67.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
66.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
66.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
66.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
66.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
65.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
65.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
64.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
64.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
64.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
64.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
63.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
63.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
63.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
62.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
62.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
61.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
61.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
60.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
60.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
60.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
59.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
59.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
59.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
58.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
57.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
57.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
57.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
56.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
56.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
56.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
55.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
55.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
54.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
54.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
53.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
52.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
52.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
52.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
51.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
50.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
50.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
50.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
50.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
47.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
47.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
42.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DRAP1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
60.3
Number of samples
231
Samples
Sample
Description
TPM
DO48741
0 years, male, NA, stage:3, alive, 240 days
161.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
150.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
148.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
140.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
132.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
128.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
125.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
117.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
116.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
112.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
112.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
111.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
111.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
111.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
104.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
101.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
98.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
98.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
96.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
95.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
94.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
94.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
93.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
92.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
91.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
91.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
91.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
90.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
88.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
88.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
88.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
87.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
85.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
84.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
83.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
83.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
80.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
80.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
80.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
80.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
79.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
78.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
77.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
76.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
75.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
75.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
74.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
74.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
74.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
74.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
73.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
72.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
72.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
72.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
72.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
72.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
72.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
71.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
71.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
71.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
71.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
70.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
70.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
70.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
68.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
68.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
68.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
67.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
67.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
66.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
66.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
66.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
65.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
65.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
65.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
64.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
64.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
64.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
64.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
64.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
64.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
63.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
63.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
63.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
63.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
63.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
62.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
62.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
62.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
61.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
60.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
60.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
60.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
60.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
60.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
60.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
59.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
59.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
59.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
58.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
58.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
58.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
58.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
58.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
58.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
58.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
58.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
57.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
57.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
57.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
57.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
56.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
55.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
55.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
55.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
54.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
54.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
54.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
54.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
54.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
54.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
54.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
54.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
53.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
53.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
53.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
52.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
52.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
52.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
52.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
52.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
52.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
52.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
52.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
52.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
51.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
51.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
51.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
51.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
50.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
50.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
49.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
49.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
48.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
48.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
48.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
48.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
48.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
48.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
48.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
48.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
48.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
47.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
47.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
47.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
47.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
47.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
47.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
46.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
46.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
46.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
46.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
46.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
46.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
45.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
45.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
44.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
44.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
44.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
44.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
43.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
43.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
43.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
43.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
43.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
43.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
43.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
42.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
42.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
41.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
41.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
40.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
40.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
40.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
39.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
39.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
39.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
39.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
38.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
38.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
38.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
38.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
38.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
38.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
38.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
37.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
37.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
37.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
36.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
36.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
36.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
36.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
36.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
35.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
35.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
35.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
35.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
35.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
35.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
35.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
35.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
34.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
34.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
32.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
32.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
31.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
30.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
30.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
29.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
28.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
28.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
27.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
27.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
27.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
27.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
26.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
26.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
24.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
23.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
21.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
20.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
865
Tumor
1.1
313
Tumor
1.0
737
Tumor
0.9
943
Tumor
0.9
147
Tumor
0.9
161
Tumor
0.9
951
Tumor
0.9
535
Tumor
0.9
957
Tumor
0.8
383
Tumor
0.8
497
Tumor
0.8
647
Tumor
0.7
953
Tumor
0.7
297
Tumor
0.7
425
Tumor
0.7
131
Tumor
0.6
375
Tumor
0.6
467
Tumor
0.6
112
Tumor
0.6
545
Tumor
0.6
537
Tumor
0.6
411
Tumor
0.6
393
Tumor
0.6
125
Tumor
0.6
283
Tumor
0.6
661
Tumor
0.6
211
Tumor
0.6
343
Tumor
0.6
523
Tumor
0.6
814
Normal
0.6
517
Tumor
0.6
387
Tumor
0.5
851
Tumor
0.5
663
Tumor
0.5
695
Tumor
0.5
741
Tumor
0.5
455
Tumor
0.5
777
Tumor
0.5
483
Tumor
0.5
487
Tumor
0.5
341
Tumor
0.5
743
Tumor
0.5
463
Tumor
0.5
355
Tumor
0.5
813
Tumor
0.5
1015
Tumor
0.5
367
Tumor
0.5
1021
Tumor
0.5
527
Tumor
0.4
391
Tumor
0.4
697
Tumor
0.4
493
Tumor
0.4
311
Tumor
0.4
123
Tumor
0.4
857
Tumor
0.4
1025
Tumor
0.4
331
Tumor
0.4
213
Tumor
0.4
823
Tumor
0.4
917
Tumor
0.4
357
Tumor
0.4
635
Tumor
0.3
515
Tumor
0.3
967
Tumor
0.3
431
Tumor
0.3
883
Tumor
0.3
351
Tumor
0.3
427
Tumor
0.3
573
Tumor
0.3
567
Tumor
0.3
477
Tumor
0.3
715
Tumor
0.3
461
Tumor
0.3
185
Tumor
0.3
1013
Tumor
0.3
665
Tumor
0.3
277
Tumor
0.3
571
Tumor
0.2
563
Tumor
0.2
1027
Tumor
0.2
721
Tumor
0.2
881
Tumor
0.2
817
Tumor
0.2
727
Tumor
0.2
395
Tumor
0.2
536
Normal
0.2
533
Tumor
0.2
187
Tumor
0.2
413
Tumor
0.2
724
Normal
0.2
513
Tumor
0.2
745
Tumor
0.2
191
Tumor
0.2
385
Tumor
0.2
192
Normal
0.2
1031
Tumor
0.2
965
Tumor
0.2
478
Normal
0.2
473
Tumor
0.2
861
Tumor
0.2
361
Tumor
0.2
671
Tumor
0.2
231
Tumor
0.2
171
Tumor
0.1
257
Tumor
0.1
365
Tumor
0.1
525
Tumor
0.1
141
Tumor
0.1
977
Tumor
0.1
195
Tumor
0.1
223
Tumor
0.1
975
Tumor
0.1
1045
Tumor
0.1
445
Tumor
0.1
217
Tumor
0.1
188
Normal
0.1
524
Normal
0.1
685
Tumor
0.1
785
Tumor
0.1
913
Tumor
0.1
465
Tumor
0.1
221
Tumor
0.1
353
Tumor
0.1
127
Tumor
0.1
271
Tumor
0.1
447
Tumor
0.0
267
Tumor
0.0
135
Tumor
0.0
452
Normal
0.0
863
Tumor
0.0
516
Normal
0.0
344
Normal
0.0
492
Normal
0.0
466
Normal
0.0
952
Normal
0.0
923
Tumor
0.0
815
Tumor
0.0
617
Tumor
0.0
444
Normal
0.0
911
Tumor
0.0
1041
Tumor
0.0
937
Tumor
0.0
491
Tumor
0.0
386
Normal
0.0
384
Normal
0.0
471
Tumor
0.0
877
Tumor
0.0
421
Tumor
0.0
464
Normal
0.0
538
Normal
0.0
352
Normal
0.0
451
Tumor
-0.1
433
Tumor
-0.1
925
Tumor
-0.1
574
Normal
-0.1
126
Normal
-0.1
627
Tumor
-0.1
224
Normal
-0.1
978
Normal
-0.1
468
Normal
-0.1
145
Tumor
-0.1
873
Tumor
-0.1
435
Tumor
-0.1
148
Normal
-0.1
285
Tumor
-0.1
981
Tumor
-0.1
212
Normal
-0.1
456
Normal
-0.1
983
Tumor
-0.1
354
Normal
-0.1
137
Tumor
-0.1
392
Normal
-0.1
852
Normal
-0.1
423
Tumor
-0.1
366
Normal
-0.1
186
Normal
-0.1
342
Normal
-0.1
518
Normal
-0.1
966
Normal
-0.1
672
Normal
-0.1
755
Tumor
-0.1
284
Normal
-0.1
558
Normal
-0.2
1016
Normal
-0.2
666
Normal
-0.2
867
Tumor
-0.2
963
Tumor
-0.2
358
Normal
-0.2
443
Tumor
-0.2
286
Normal
-0.2
146
Normal
-0.2
436
Normal
-0.2
921
Tumor
-0.2
396
Normal
-0.2
498
Normal
-0.2
434
Normal
-0.2
327
Tumor
-0.2
954
Normal
-0.2
218
Normal
-0.2
557
Tumor
-0.2
268
Normal
-0.2
874
Normal
-0.2
615
Tumor
-0.2
662
Normal
-0.2
228
Normal
-0.2
984
Normal
-0.2
628
Normal
-0.2
474
Normal
-0.2
261
Tumor
-0.2
415
Tumor
-0.2
227
Tumor
-0.2
858
Normal
-0.2
914
Normal
-0.2
446
Normal
-0.2
554
Normal
-0.2
388
Normal
-0.2
172
Normal
-0.2
982
Normal
-0.2
778
Normal
-0.2
818
Normal
-0.2
362
Normal
-0.2
312
Normal
-0.2
916
Normal
-0.3
664
Normal
-0.3
472
Normal
-0.3
1014
Normal
-0.3
756
Normal
-0.3
394
Normal
-0.3
878
Normal
-0.3
1043
Tumor
-0.3
686
Normal
-0.3
272
Normal
-0.3
1028
Normal
-0.3
138
Normal
-0.3
713
Tumor
-0.3
955
Tumor
-0.3
938
Normal
-0.3
862
Normal
-0.3
514
Normal
-0.3
546
Normal
-0.3
866
Normal
-0.3
124
Normal
-0.3
1026
Normal
-0.3
262
Normal
-0.3
368
Normal
-0.3
968
Normal
-0.3
976
Normal
-0.3
816
Normal
-0.3
864
Normal
-0.3
944
Normal
-0.3
786
Normal
-0.3
824
Normal
-0.3
482
Normal
-0.3
568
Normal
-0.3
526
Normal
-0.3
738
Normal
-0.3
162
Normal
-0.3
142
Normal
-0.3
332
Normal
-0.3
432
Normal
-0.3
728
Normal
-0.4
696
Normal
-0.4
716
Normal
-0.4
481
Tumor
-0.4
1042
Normal
-0.4
214
Normal
-0.4
528
Normal
-0.4
958
Normal
-0.4
232
Normal
-0.4
744
Normal
-0.4
114
Normal
-0.4
376
Normal
-0.4
553
Tumor
-0.4
956
Normal
-0.4
746
Normal
-0.4
363
Tumor
-0.4
648
Normal
-0.4
278
Normal
-0.4
364
Normal
-0.4
222
Normal
-0.4
572
Normal
-0.4
1044
Normal
-0.4
258
Normal
-0.4
884
Normal
-0.4
424
Normal
-0.4
448
Normal
-0.4
113
Tumor
-0.4
462
Normal
-0.4
868
Normal
-0.4
412
Normal
-0.4
534
Normal
-0.4
328
Normal
-0.4
298
Normal
-0.4
416
Normal
-0.4
484
Normal
-0.4
641
Tumor
-0.4
616
Normal
-0.4
714
Normal
-0.4
428
Normal
-0.5
136
Normal
-0.5
723
Tumor
-0.5
882
Normal
-0.5
924
Normal
-0.5
422
Normal
-0.5
1032
Normal
-0.5
314
Normal
-0.5
494
Normal
-0.5
912
Normal
-0.5
414
Normal
-0.5
698
Normal
-0.5
132
Normal
-0.5
1022
Normal
-0.5
196
Normal
-0.5
356
Normal
-0.5
128
Normal
-0.6
918
Normal
-0.6
488
Normal
-0.6
642
Normal
-0.6
722
Normal
-0.6
964
Normal
-0.6
926
Normal
-0.6
111
Normal
-0.7
426
Normal
-0.7
564
Normal
-0.7
922
Normal
-0.7
742
Normal
-0.7
915
Tumor
-0.7
1046
Normal
-0.7
636
Normal
-0.8
618
Normal
-0.9
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.